RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 SMYD2Q9NRG4 433 aa8.02□□□□□ -1.13
COL6A4P1-202ENST00000487147 DDX18Q9NVP1 670 aaKnown RBP8.02□□□□□ -1.13
COL6A4P1-202ENST00000487147 CLIC5Q9NZA1 410 aa8.02□□□□□ -1.13
COL6A4P1-202ENST00000487147 SOX13Q9UN79 622 aa8.02□□□□□ -1.13
COL6A4P1-202ENST00000487147 USP20Q9Y2K6 914 aa8.02□□□□□ -1.13
COL6A4P1-202ENST00000487147 FRMPD4Q14CM0 1322 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 ARFGEF2Q9Y6D5 1785 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 TISP43B9A030 160 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 TCP10L2B9ZVM9 353 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 MED7O43513 233 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 ASMTLO95671 621 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 HLA-DRAP01903 254 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 OSBPP22059 807 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 VCPP55072 806 aaKnown RBP8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 FMO1Q01740 532 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 POU5F1Q01860 360 aaKnown RBP8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 TAP1Q03518 808 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 KLC3Q6P597 504 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 POTEAQ6S8J7 498 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 C1orf186Q6ZWK4 172 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 FAM71AQ8IYT1 594 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 AGR3Q8TD06 166 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 PCDHB18PQ96TA0 734 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 CADM1Q9BY67 442 aaKnown RBP8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 MMADHCQ9H3L0 296 aaPredicted RBP8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 NGRNQ9NPE2 291 aaKnown RBP8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 TOPORSQ9NS56 1045 aaPredicted RBP8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 TBC1D22BQ9NU19 505 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 SEPT10Q9P0V9 454 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 PPP1R1BQ9UD71 204 aaPredicted RBP8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 N4BP2Q86UW6 1770 aaPredicted RBP8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 FAM237BA0A1B0GVD1 139 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 A6NJR5 290 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 PRPF4O43172 522 aaKnown RBP eCLIP8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 KCNQ2O43526 872 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 STRNO43815 780 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 LYNP07948 512 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 KRT3P12035 628 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 CDH6P55285 790 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 SNX16P57768 344 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 PSMC5P62195 406 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 OCRLQ01968 901 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 SGSM1Q2NKQ1 1148 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 SLC44A4Q53GD3 710 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 MROH9Q5TGP6 573 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 GRAMD4Q6IC98 578 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 RFWD3Q6PCD5 774 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 IYDQ6PHW0 289 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 RIPOR1Q6ZS17 1223 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 SV2AQ7L0J3 742 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 MCPH1Q8NEM0 835 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 SPATA18Q8TC71 538 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 PYDC1Q8WXC3 89 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 CLMNQ96JQ2 1002 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 CNBD2Q96M20 576 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 ECSITQ9BQ95 431 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 TRPV6Q9H1D0 765 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 UNC45AQ9H3U1 944 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 DBNDD1Q9H9R9 158 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 TMEM165Q9HC07 324 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 LRRC4CQ9HCJ2 640 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 AVENQ9NQS1 362 aaPredicted RBP8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 WDR35Q9P2L0 1181 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 PRR12Q9ULL5 1215 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 AIM2O14862 343 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 LDHAP00338 332 aaKnown RBP8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 SERPINB2P05120 415 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 ETS1P14921 441 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 CRKP46108 304 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 ACOT2P49753 483 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 BCAR1P56945 870 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 SNRPFP62306 86 aaKnown RBP8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 OTUD4Q01804 1114 aaKnown RBP8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 SMAD1Q15797 465 aaKnown RBP8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 GRIK5Q16478 980 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 CYP1B1Q16678 543 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 PPP6R3Q5H9R7 873 aaPredicted RBP8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 SLC10A5Q5PT55 438 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 SLFN12LQ6IEE8 588 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 OR6B2Q6IFH4 312 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 C1orf228Q6PIY5 440 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 MFSD7Q6UXD7 560 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 SPOCD1Q6ZMY3 1216 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 RFWD2Q8NHY2 731 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 ACTL9Q8TC94 416 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 GDPD5Q8WTR4 605 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 SLC7A3Q8WY07 619 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 CATSPER2Q96P56 530 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 KIFC3Q9BVG8 833 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 GPRC5CQ9NQ84 441 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 RBAKQ9NYW8 714 aaPredicted RBP8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 R3HDM2Q9Y2K5 976 aaKnown RBP8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 PCDHA2Q9Y5H9 948 aa8.01□□□□□ -1.13
COL6A4P1-202ENST00000487147 PPEF1O14829 653 aaPredicted RBP8□□□□□ -1.13
COL6A4P1-202ENST00000487147 TYK2P29597 1187 aa8□□□□□ -1.13
COL6A4P1-202ENST00000487147 JAK3P52333 1124 aa8□□□□□ -1.13
COL6A4P1-202ENST00000487147 HADHBP55084 474 aaKnown RBP8□□□□□ -1.13
COL6A4P1-202ENST00000487147 LIN52Q52LA3 116 aa8□□□□□ -1.13
COL6A4P1-202ENST00000487147 ACSBG2Q5FVE4 666 aa8□□□□□ -1.13
COL6A4P1-202ENST00000487147 CDCA2Q69YH5 1023 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms