RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 ADAM12O43184 909 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 ATP2C2O75185 946 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 SERPING1P05155 500 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 CCDC172P0C7W6 258 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 VDRP11473 427 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 PTPN1P18031 435 aaKnown RBP10.18□□□□□ -0.78
MCF2L-227ENST00000486806 BRD2P25440 801 aaKnown RBP10.18□□□□□ -0.78
MCF2L-227ENST00000486806 BPIFB4P59827 614 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 ERVFC1P60507 584 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 TSPY1Q01534 308 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 FMO1Q01740 532 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 CREMQ03060 361 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 ARID5AQ03989 594 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 PTK2Q05397 1052 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 ASTE1Q2TB18 679 aaPredicted RBP10.18□□□□□ -0.78
MCF2L-227ENST00000486806 MDH1BQ5I0G3 518 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 KIAA1841Q6NSI8 718 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 ZNF571Q7Z3V5 609 aaPredicted RBP10.18□□□□□ -0.78
MCF2L-227ENST00000486806 LRRTM3Q86VH5 581 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 ZNF677Q86XU0 584 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 FUKQ8N0W3 1084 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 C12orf29Q8N999 325 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 MYCBPAPQ8TBZ2 947 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 SLC20A1Q8WUM9 679 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 AUTS2Q8WXX7 1259 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 MYLPFQ96A32 169 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 PCED1BQ96HM7 432 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 TCF25Q9BQ70 676 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 LPIN3Q9BQK8 851 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 CLSTN3Q9BQT9 956 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 HAUS4Q9H6D7 363 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 TLR9Q9NR96 1032 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.18□□□□□ -0.78
MCF2L-227ENST00000486806 MRPL17Q9NRX2 175 aaKnown RBP10.18□□□□□ -0.78
MCF2L-227ENST00000486806 TMLHEQ9NVH6 421 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 FNIP2Q9P278 1114 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 PUF60Q9UHX1 559 aaKnown RBP10.18□□□□□ -0.78
MCF2L-227ENST00000486806 KIAA1257Q9ULG3 409 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.18□□□□□ -0.78
MCF2L-227ENST00000486806 CDY1Q9Y6F8 540 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 NLRC5Q86WI3 1866 aa10.18□□□□□ -0.78
MCF2L-227ENST00000486806 PLXNA4Q9HCM2 1894 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 SSU72P8A0A1W2PR75 194 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 WDR27A2RRH5 827 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 C2CD2LO14523 706 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 THAP12O43422 761 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 LPXNO60711 386 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 VNN2O95498 520 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 PLEKP08567 350 aaPredicted RBP10.17□□□□□ -0.78
MCF2L-227ENST00000486806 OR4Q2P0C623 313 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 SKILP12757 684 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 CCDC130P13994 396 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 CD19P15391 556 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 CHRNB2P17787 502 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 RPL17P18621 184 aaKnown RBP10.17□□□□□ -0.78
MCF2L-227ENST00000486806 ANXA13P27216 316 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 IRS1P35568 1242 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 CCZ1BP86790 482 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 CCZ1P86791 482 aaPredicted RBP10.17□□□□□ -0.78
MCF2L-227ENST00000486806 CDR2Q01850 454 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 ROR1Q01973 937 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 KLHL30Q0D2K2 578 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 GPR17Q13304 367 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 MAPK8IP2Q13387 824 aaPredicted RBP10.17□□□□□ -0.78
MCF2L-227ENST00000486806 GPM6BQ13491 265 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 SMC1AQ14683 1233 aaKnown RBP10.17□□□□□ -0.78
MCF2L-227ENST00000486806 STILQ15468 1287 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 MAPRE1Q15691 268 aaKnown RBP10.17□□□□□ -0.78
MCF2L-227ENST00000486806 PKDCCQ504Y2 493 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 SGO2Q562F6 1265 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 TDRD12Q587J7 1177 aaKnown RBP10.17□□□□□ -0.78
MCF2L-227ENST00000486806 PPP1R26Q5T8A7 1209 aaPredicted RBP10.17□□□□□ -0.78
MCF2L-227ENST00000486806 LCLAT1Q6UWP7 414 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 PAQR9Q6ZVX9 377 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 FAM35AQ86V20 835 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 LRRC8AQ8IWT6 810 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 SLC2A14Q8TDB8 520 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 GDPD5Q8WTR4 605 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 ZNF606Q8WXB4 792 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 ARNTL2Q8WYA1 636 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 HEXIM2Q96MH2 286 aaKnown RBP10.17□□□□□ -0.78
MCF2L-227ENST00000486806 CHP1Q99653 195 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 HNRNPABQ99729 332 aaKnown RBP10.17□□□□□ -0.78
MCF2L-227ENST00000486806 DNAI2Q9GZS0 605 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 LMAN2LQ9H0V9 348 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 CERS4Q9HA82 394 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 NGRNQ9NPE2 291 aaKnown RBP10.17□□□□□ -0.78
MCF2L-227ENST00000486806 FAM49BQ9NUQ9 324 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 ZNHIT6Q9NWK9 470 aaKnown RBP10.17□□□□□ -0.78
MCF2L-227ENST00000486806 GTF3C4Q9UKN8 822 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 TSPAN16Q9UKR8 245 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 NENFQ9UMX5 172 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 PCDHGC3Q9UN70 934 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 SSX2IPQ9Y2D8 614 aa10.17□□□□□ -0.78
MCF2L-227ENST00000486806 BZW2Q9Y6E2 419 aaKnown RBP10.17□□□□□ -0.78
MCF2L-227ENST00000486806 COL4A4P53420 1690 aaPredicted RBP10.17□□□□□ -0.78
MCF2L-227ENST00000486806 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.16□□□□□ -0.78
MCF2L-227ENST00000486806 MTMR11A4FU01 709 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 C2orf71A6NGG8 1288 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 HIDE1A8MVS5 230 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms