RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 MICAL1Q8TDZ2 1067 aa23.67■■□□□ 1.38
CLN5-202ENST00000485938 SAR1AQ9NR31 198 aa23.67■■□□□ 1.38
CLN5-202ENST00000485938 DDX56Q9NY93 547 aaKnown RBP23.67■■□□□ 1.38
CLN5-202ENST00000485938 MAFGO15525 162 aa23.67■■□□□ 1.38
CLN5-202ENST00000485938 PIGRP01833 764 aa23.67■■□□□ 1.38
CLN5-202ENST00000485938 PTPN4P29074 926 aa23.67■■□□□ 1.38
CLN5-202ENST00000485938 SP4Q02446 784 aa23.67■■□□□ 1.38
CLN5-202ENST00000485938 MSS51Q4VC12 460 aa23.67■■□□□ 1.38
CLN5-202ENST00000485938 PPP1R15BQ5SWA1 713 aa23.67■■□□□ 1.38
CLN5-202ENST00000485938 CAPRIN2Q6IMN6 1127 aaKnown RBP23.67■■□□□ 1.38
CLN5-202ENST00000485938 DCUN1D2Q6PH85 259 aa23.67■■□□□ 1.38
CLN5-202ENST00000485938 ADGRD1Q6QNK2 874 aa23.67■■□□□ 1.38
CLN5-202ENST00000485938 MTDHQ86UE4 582 aaKnown RBP23.67■■□□□ 1.38
CLN5-202ENST00000485938 MZB1Q8WU39 189 aa23.67■■□□□ 1.38
CLN5-202ENST00000485938 DENND2DQ9H6A0 471 aaPredicted RBP23.67■■□□□ 1.38
CLN5-202ENST00000485938 KANSL3Q9P2N6 904 aa23.67■■□□□ 1.38
CLN5-202ENST00000485938 RPL26L1Q9UNX3 145 aaKnown RBP23.67■■□□□ 1.38
CLN5-202ENST00000485938 SNCAIPQ9Y6H5 919 aa23.67■■□□□ 1.38
CLN5-202ENST00000485938 CNTNAP2Q9UHC6 1331 aa23.67■■□□□ 1.38
CLN5-202ENST00000485938 DOCK5Q9H7D0 1870 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 RGS20O76081 388 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 LSM8O95777 96 aaKnown RBP23.66■■□□□ 1.38
CLN5-202ENST00000485938 SSTR1P30872 391 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 CTCFP49711 727 aaPredicted RBP23.66■■□□□ 1.38
CLN5-202ENST00000485938 NCOA4Q13772 614 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 EMC2Q15006 297 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 MTERF2Q49AM1 385 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 FNBP1LQ5T0N5 605 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 ANKRD22Q5VYY1 191 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 PCGF5Q86SE9 256 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 ATP11CQ8NB49 1132 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 SH3TC2Q8TF17 1288 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 WDR83Q9BRX9 315 aaKnown RBP23.66■■□□□ 1.38
CLN5-202ENST00000485938 FAM167BQ9BTA0 163 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 PHACTR1Q9C0D0 580 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 ANKFY1Q9P2R3 1169 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 CTDP1Q9Y5B0 961 aaPredicted RBP23.66■■□□□ 1.38
CLN5-202ENST00000485938 TNS1Q9HBL0 1735 aaKnown RBP23.66■■□□□ 1.38
CLN5-202ENST00000485938 C3orf70A6NLC5 250 aaPredicted RBP23.66■■□□□ 1.38
CLN5-202ENST00000485938 PHBP35232 272 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 PIGHQ14442 188 aaPredicted RBP23.66■■□□□ 1.38
CLN5-202ENST00000485938 SLFN12LQ6IEE8 588 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 PPIL6Q8IXY8 311 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 TTC8Q8TAM2 541 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 PYROXD1Q8WU10 500 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 CPT1BQ92523 772 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 PAFAH2Q99487 392 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 MSTO1Q9BUK6 570 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 JPH1Q9HDC5 661 aaPredicted RBP23.66■■□□□ 1.38
CLN5-202ENST00000485938 ZNRF3Q9ULT6 936 aa23.66■■□□□ 1.38
CLN5-202ENST00000485938 NIPA2Q8N8Q9 360 aa23.65■■□□□ 1.38
CLN5-202ENST00000485938 ASAP3Q8TDY4 903 aa23.65■■□□□ 1.38
CLN5-202ENST00000485938 KCNN1Q92952 543 aa23.65■■□□□ 1.38
CLN5-202ENST00000485938 TMEM143Q96AN5 459 aa23.65■■□□□ 1.38
CLN5-202ENST00000485938 ACSS3Q9H6R3 686 aa23.65■■□□□ 1.38
CLN5-202ENST00000485938 KCNG1Q9UIX4 513 aa23.65■■□□□ 1.38
CLN5-202ENST00000485938 RIPK3Q9Y572 518 aa23.65■■□□□ 1.38
CLN5-202ENST00000485938 A0A0B4J269 797 aa23.65■■□□□ 1.38
CLN5-202ENST00000485938 ENTPD5O75356 428 aa23.65■■□□□ 1.38
CLN5-202ENST00000485938 TROVE2P10155 538 aaKnown RBP eCLIP23.65■■□□□ 1.38
CLN5-202ENST00000485938 CHRM1P11229 460 aaPredicted RBP23.65■■□□□ 1.38
CLN5-202ENST00000485938 ARL4CP56559 192 aa23.65■■□□□ 1.38
CLN5-202ENST00000485938 ACTR2P61160 394 aa23.65■■□□□ 1.38
CLN5-202ENST00000485938 EN1Q05925 392 aaPredicted RBP23.65■■□□□ 1.38
CLN5-202ENST00000485938 ABHD15Q6UXT9 468 aa23.65■■□□□ 1.38
CLN5-202ENST00000485938 TEX9Q8N6V9 391 aa23.65■■□□□ 1.38
CLN5-202ENST00000485938 BANPQ8N9N5 519 aa23.65■■□□□ 1.38
CLN5-202ENST00000485938 TCP10LQ8TDR4 215 aa23.65■■□□□ 1.38
CLN5-202ENST00000485938 RNF146Q9NTX7 359 aa23.65■■□□□ 1.38
CLN5-202ENST00000485938 SAE1Q9UBE0 346 aaPredicted RBP23.65■■□□□ 1.38
CLN5-202ENST00000485938 WDR91A4D1P6 747 aa23.64■■□□□ 1.38
CLN5-202ENST00000485938 A6NHS1 94 aa23.64■■□□□ 1.38
CLN5-202ENST00000485938 HNRNPCL1O60812 293 aaKnown RBP23.64■■□□□ 1.38
CLN5-202ENST00000485938 PIAS1O75925 651 aa23.64■■□□□ 1.38
CLN5-202ENST00000485938 LDHAP00338 332 aaKnown RBP23.64■■□□□ 1.38
CLN5-202ENST00000485938 PSMC4P43686 418 aa23.64■■□□□ 1.38
CLN5-202ENST00000485938 GDF10P55107 478 aa23.64■■□□□ 1.38
CLN5-202ENST00000485938 CMPK2Q5EBM0 449 aa23.64■■□□□ 1.38
CLN5-202ENST00000485938 CDCA2Q69YH5 1023 aaPredicted RBP23.64■■□□□ 1.38
CLN5-202ENST00000485938 C3orf62Q6ZUJ4 267 aa23.64■■□□□ 1.38
CLN5-202ENST00000485938 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.64■■□□□ 1.38
CLN5-202ENST00000485938 NAT8LQ8N9F0 302 aa23.64■■□□□ 1.38
CLN5-202ENST00000485938 RFWD2Q8NHY2 731 aa23.64■■□□□ 1.38
CLN5-202ENST00000485938 MIPEPQ99797 713 aa23.64■■□□□ 1.38
CLN5-202ENST00000485938 TARS2Q9BW92 718 aaKnown RBP23.64■■□□□ 1.38
CLN5-202ENST00000485938 SLC9A2Q9UBY0 812 aa23.64■■□□□ 1.38
CLN5-202ENST00000485938 TM9SF1O15321 606 aa23.64■■□□□ 1.37
CLN5-202ENST00000485938 BRD2P25440 801 aaKnown RBP23.64■■□□□ 1.37
CLN5-202ENST00000485938 MARK3P27448 753 aa23.64■■□□□ 1.37
CLN5-202ENST00000485938 TAP1Q03518 808 aa23.64■■□□□ 1.37
CLN5-202ENST00000485938 XKR3Q5GH77 459 aa23.64■■□□□ 1.37
CLN5-202ENST00000485938 MTMR14Q8NCE2 650 aa23.64■■□□□ 1.37
CLN5-202ENST00000485938 FBXO41Q8TF61 875 aa23.64■■□□□ 1.37
CLN5-202ENST00000485938 DCAKDQ8WVC6 231 aa23.64■■□□□ 1.37
CLN5-202ENST00000485938 WNK4Q96J92 1243 aa23.64■■□□□ 1.37
CLN5-202ENST00000485938 C12orf65Q9H3J6 166 aaKnown RBP23.64■■□□□ 1.37
CLN5-202ENST00000485938 C10orf88Q9H8K7 445 aa23.64■■□□□ 1.37
CLN5-202ENST00000485938 SLC17A7Q9P2U7 560 aa23.64■■□□□ 1.37
CLN5-202ENST00000485938 DCTN4Q9UJW0 460 aa23.64■■□□□ 1.37
CLN5-202ENST00000485938 SIP14410 1827 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms