RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 GTSE1Q9NYZ3 720 aa18.44■□□□□ 0.54
SMC4-216ENST00000485645 NCDNQ9UBB6 729 aa18.44■□□□□ 0.54
SMC4-216ENST00000485645 TFIP11Q9UBB9 837 aaKnown RBP18.44■□□□□ 0.54
SMC4-216ENST00000485645 R3HCC1Q9Y3T6 440 aaKnown RBP18.44■□□□□ 0.54
SMC4-216ENST00000485645 DCHS1Q96JQ0 3298 aa18.43■□□□□ 0.54
SMC4-216ENST00000485645 SPECC1L-ADORA2AF8WAN1 911 aa18.43■□□□□ 0.54
SMC4-216ENST00000485645 CSH1P0DML2 217 aa18.43■□□□□ 0.54
SMC4-216ENST00000485645 CSH2P0DML3 217 aa18.43■□□□□ 0.54
SMC4-216ENST00000485645 CXCL12P48061 93 aa18.43■□□□□ 0.54
SMC4-216ENST00000485645 AMPD3Q01432 767 aa18.43■□□□□ 0.54
SMC4-216ENST00000485645 CMTM8Q8IZV2 173 aa18.43■□□□□ 0.54
SMC4-216ENST00000485645 CELF5Q8N6W0 485 aaKnown RBP18.43■□□□□ 0.54
SMC4-216ENST00000485645 CXorf38Q8TB03 319 aa18.43■□□□□ 0.54
SMC4-216ENST00000485645 LEO1Q8WVC0 666 aaPredicted RBP18.43■□□□□ 0.54
SMC4-216ENST00000485645 SECISBP2LQ93073 1101 aaKnown RBP18.43■□□□□ 0.54
SMC4-216ENST00000485645 MTMR12Q9C0I1 747 aa18.43■□□□□ 0.54
SMC4-216ENST00000485645 KBTBD4Q9NVX7 518 aa18.43■□□□□ 0.54
SMC4-216ENST00000485645 GDAP2Q9NXN4 497 aa18.43■□□□□ 0.54
SMC4-216ENST00000485645 SMG5Q9UPR3 1016 aaKnown RBP18.43■□□□□ 0.54
SMC4-216ENST00000485645 SNX9Q9Y5X1 595 aa18.43■□□□□ 0.54
SMC4-216ENST00000485645 ZNF233A6NK53 670 aa18.42■□□□□ 0.54
SMC4-216ENST00000485645 F11P03951 625 aa18.42■□□□□ 0.54
SMC4-216ENST00000485645 TDGF1P13385 188 aa18.42■□□□□ 0.54
SMC4-216ENST00000485645 HMGA1P17096 107 aaKnown RBP18.42■□□□□ 0.54
SMC4-216ENST00000485645 ACAT1P24752 427 aaKnown RBP18.42■□□□□ 0.54
SMC4-216ENST00000485645 DDX6P26196 483 aaKnown RBP eCLIP18.42■□□□□ 0.54
SMC4-216ENST00000485645 CTHP32929 405 aa18.42■□□□□ 0.54
SMC4-216ENST00000485645 AVPR1AP37288 418 aa18.42■□□□□ 0.54
SMC4-216ENST00000485645 LHX1P48742 406 aa18.42■□□□□ 0.54
SMC4-216ENST00000485645 NLRP12P59046 1061 aa18.42■□□□□ 0.54
SMC4-216ENST00000485645 SURF1Q15526 300 aa18.42■□□□□ 0.54
SMC4-216ENST00000485645 E2F4Q16254 413 aa18.42■□□□□ 0.54
SMC4-216ENST00000485645 INTS6LQ5JSJ4 861 aaKnown RBP18.42■□□□□ 0.54
SMC4-216ENST00000485645 LMBRD2Q68DH5 695 aaPredicted RBP18.42■□□□□ 0.54
SMC4-216ENST00000485645 SCARA3Q6AZY7 606 aa18.42■□□□□ 0.54
SMC4-216ENST00000485645 SPEM1Q8N4L4 309 aa18.42■□□□□ 0.54
SMC4-216ENST00000485645 TOP6BLQ8N6T0 577 aa18.42■□□□□ 0.54
SMC4-216ENST00000485645 SPATA18Q8TC71 538 aa18.42■□□□□ 0.54
SMC4-216ENST00000485645 HPS3Q969F9 1004 aa18.42■□□□□ 0.54
SMC4-216ENST00000485645 RMDN1Q96DB5 314 aa18.42■□□□□ 0.54
SMC4-216ENST00000485645 FAM84AQ96KN4 292 aa18.42■□□□□ 0.54
SMC4-216ENST00000485645 TRIM9Q9C026 710 aa18.42■□□□□ 0.54
SMC4-216ENST00000485645 SMG9Q9H0W8 520 aaKnown RBP18.42■□□□□ 0.54
SMC4-216ENST00000485645 ABCB6Q9NP58 842 aa18.42■□□□□ 0.54
SMC4-216ENST00000485645 INTS13Q9NVM9 706 aa18.42■□□□□ 0.54
SMC4-216ENST00000485645 SIX4Q9UIU6 781 aa18.42■□□□□ 0.54
SMC4-216ENST00000485645 MAGED2Q9UNF1 606 aaPredicted RBP18.42■□□□□ 0.54
SMC4-216ENST00000485645 CUTAO60888 179 aa18.41■□□□□ 0.54
SMC4-216ENST00000485645 TNNC2P02585 160 aa18.41■□□□□ 0.54
SMC4-216ENST00000485645 GPR15P49685 360 aa18.41■□□□□ 0.54
SMC4-216ENST00000485645 RPL10AP62906 217 aaKnown RBP18.41■□□□□ 0.54
SMC4-216ENST00000485645 ASIC1P78348 528 aa18.41■□□□□ 0.54
SMC4-216ENST00000485645 SATB1Q01826 763 aa18.41■□□□□ 0.54
SMC4-216ENST00000485645 TNK2Q07912 1038 aa18.41■□□□□ 0.54
SMC4-216ENST00000485645 MYO1EQ12965 1108 aa18.41■□□□□ 0.54
SMC4-216ENST00000485645 GAS6Q14393 721 aa18.41■□□□□ 0.54
SMC4-216ENST00000485645 DGKKQ5KSL6 1271 aa18.41■□□□□ 0.54
SMC4-216ENST00000485645 TXNDC11Q6PKC3 985 aa18.41■□□□□ 0.54
SMC4-216ENST00000485645 TMEM150AQ86TG1 271 aa18.41■□□□□ 0.54
SMC4-216ENST00000485645 ADGRF2Q8IZF7 708 aa18.41■□□□□ 0.54
SMC4-216ENST00000485645 MAB21L3Q8N8X9 362 aa18.41■□□□□ 0.54
SMC4-216ENST00000485645 IQUBQ8NA54 791 aa18.41■□□□□ 0.54
SMC4-216ENST00000485645 GLIS3Q8NEA6 775 aa18.41■□□□□ 0.54
SMC4-216ENST00000485645 MRPS31Q92665 395 aaKnown RBP18.41■□□□□ 0.54
SMC4-216ENST00000485645 DHX58Q96C10 678 aa18.41■□□□□ 0.54
SMC4-216ENST00000485645 RBM12Q9NTZ6 932 aaKnown RBP18.41■□□□□ 0.54
SMC4-216ENST00000485645 GTF3C4Q9UKN8 822 aa18.41■□□□□ 0.54
SMC4-216ENST00000485645 DMXL1Q9Y485 3027 aa18.4■□□□□ 0.54
SMC4-216ENST00000485645 SOBPA7XYQ1 873 aa18.4■□□□□ 0.54
SMC4-216ENST00000485645 EIF3DO15371 548 aaKnown RBP eCLIP18.4■□□□□ 0.54
SMC4-216ENST00000485645 YEATS4O95619 227 aa18.4■□□□□ 0.54
SMC4-216ENST00000485645 CYP2F1P24903 491 aa18.4■□□□□ 0.54
SMC4-216ENST00000485645 PCSK1P29120 753 aa18.4■□□□□ 0.54
SMC4-216ENST00000485645 PON2Q15165 354 aa18.4■□□□□ 0.54
SMC4-216ENST00000485645 DDR2Q16832 855 aa18.4■□□□□ 0.54
SMC4-216ENST00000485645 DUOXA2Q1HG44 320 aa18.4■□□□□ 0.54
SMC4-216ENST00000485645 ITPRIPL2Q3MIP1 535 aa18.4■□□□□ 0.54
SMC4-216ENST00000485645 SDHAF4Q5VUM1 108 aa18.4■□□□□ 0.54
SMC4-216ENST00000485645 DPH6Q7L8W6 267 aa18.4■□□□□ 0.54
SMC4-216ENST00000485645 OSTM1Q86WC4 334 aa18.4■□□□□ 0.54
SMC4-216ENST00000485645 CBWD2Q8IUF1 395 aa18.4■□□□□ 0.54
SMC4-216ENST00000485645 SPATA2LQ8IUW3 424 aaPredicted RBP18.4■□□□□ 0.54
SMC4-216ENST00000485645 GPR161Q8N6U8 529 aaKnown RBP18.4■□□□□ 0.54
SMC4-216ENST00000485645 PKMYT1Q99640 499 aa18.4■□□□□ 0.54
SMC4-216ENST00000485645 KIAA1586Q9HCI6 787 aa18.4■□□□□ 0.54
SMC4-216ENST00000485645 GKN1Q9NS71 199 aa18.4■□□□□ 0.54
SMC4-216ENST00000485645 HSPBP1Q9NZL4 362 aa18.4■□□□□ 0.54
SMC4-216ENST00000485645 UXTQ9UBK9 157 aaPredicted RBP18.4■□□□□ 0.54
SMC4-216ENST00000485645 DENND4CQ5VZ89 1909 aa18.4■□□□□ 0.54
SMC4-216ENST00000485645 ZNF638Q14966 1978 aaKnown RBP18.39■□□□□ 0.53
SMC4-216ENST00000485645 GABRDO14764 452 aa18.39■□□□□ 0.53
SMC4-216ENST00000485645 SOWAHAQ2M3V2 549 aa18.39■□□□□ 0.53
SMC4-216ENST00000485645 FOXD4L5Q5VV16 416 aaPredicted RBP18.39■□□□□ 0.53
SMC4-216ENST00000485645 TXNDC8Q6A555 127 aa18.39■□□□□ 0.53
SMC4-216ENST00000485645 SHC4Q6S5L8 630 aa18.39■□□□□ 0.53
SMC4-216ENST00000485645 STKLD1Q8NE28 680 aa18.39■□□□□ 0.53
SMC4-216ENST00000485645 OR5B17Q8NGF7 314 aa18.39■□□□□ 0.53
SMC4-216ENST00000485645 ZNF507Q8TCN5 953 aa18.39■□□□□ 0.53
SMC4-216ENST00000485645 FOXD4L4Q8WXT5 416 aaPredicted RBP18.39■□□□□ 0.53
SMC4-216ENST00000485645 USP13Q92995 863 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms