RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 C11orf57Q6ZUT1 292 aaPredicted RBP8.82□□□□□ -1
SF3A1-208ENST00000485618 LIMS2Q7Z4I7 341 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 ADGRD2Q7Z7M1 963 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 ITIH5Q86UX2 942 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 IRF2BP1Q8IU81 584 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 SPATA2LQ8IUW3 424 aaPredicted RBP8.82□□□□□ -1
SF3A1-208ENST00000485618 GLYCTKQ8IVS8 523 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 TCEAL8Q8IYN2 117 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 PPM1KQ8N3J5 372 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 LEMD2Q8NC56 503 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 CMASQ8NFW8 434 aaPredicted RBP8.82□□□□□ -1
SF3A1-208ENST00000485618 FUBP3Q96I24 572 aaKnown RBP eCLIP8.82□□□□□ -1
SF3A1-208ENST00000485618 CEP295NLQ96MC4 621 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 NT5C1AQ9BXI3 368 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 RHOBTB2Q9BYZ6 727 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 INTS2Q9H0H0 1204 aaKnown RBP8.82□□□□□ -1
SF3A1-208ENST00000485618 ZCWPW1Q9H0M4 648 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 KCNH6Q9H252 994 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 CYP4F11Q9HBI6 524 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 GCNT4Q9P109 453 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 CD207Q9UJ71 328 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 ASB3Q9Y575 518 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 ANK1P16157 1881 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 KIAA1671Q9BY89 1806 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 MUC6Q6W4X9 2439 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 CCDC195A0A1B0GUA6 201 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 ZNF197O14709 1029 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 CBFA2T2O43439 604 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 ZMYND10O75800 440 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 FGF19O95750 216 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 POU2F2P09086 479 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 PDGFRBP09619 1106 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 WEE2P0C1S8 567 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 CCDC172P0C7W6 258 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 PTPN1P18031 435 aaKnown RBP8.81□□□□□ -1
SF3A1-208ENST00000485618 RPL17P18621 184 aaKnown RBP8.81□□□□□ -1
SF3A1-208ENST00000485618 ANXA13P27216 316 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 ZNF445P59923 1031 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 ROR1Q01973 937 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 CYP27A1Q02318 531 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 UBXN1Q04323 297 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 INCA1Q0VD86 236 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 KRT31Q15323 416 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 SLC39A12Q504Y0 691 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 HSP90AA4PQ58FG1 418 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 ANKRD54Q6NXT1 300 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 SCARA5Q6ZMJ2 495 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 RNF135Q8IUD6 432 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 B3GALNT2Q8NCR0 500 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 MYCBPAPQ8TBZ2 947 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 SEMA4DQ92854 862 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 ZNF512Q96ME7 567 aaPredicted RBP8.81□□□□□ -1
SF3A1-208ENST00000485618 HEXIM2Q96MH2 286 aaKnown RBP8.81□□□□□ -1
SF3A1-208ENST00000485618 MED15Q96RN5 788 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 SYT15Q9BQS2 421 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 CRACR2AQ9BSW2 395 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 PI4K2AQ9BTU6 479 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 FUCA2Q9BTY2 467 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 BCO2Q9BYV7 579 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 ELOVL4Q9GZR5 314 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 VPS16Q9H269 839 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 ADAM7Q9H2U9 754 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 CBX8Q9HC52 389 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 UBE2TQ9NPD8 197 aaPredicted RBP8.81□□□□□ -1
SF3A1-208ENST00000485618 MAN1C1Q9NR34 630 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 CISHQ9NSE2 258 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 TAB2Q9NYJ8 693 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 APEX2Q9UBZ4 518 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 FBXW11Q9UKB1 542 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 PCDHGC5Q9Y5F6 944 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 SCN1AP35498 2009 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 PLXNA4Q9HCM2 1894 aa8.81□□□□□ -1
SF3A1-208ENST00000485618 LGALS16A8MUM7 142 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 TRIM66O15016 1216 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 MED7O43513 233 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 C8AP07357 584 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 SPATA31D3P0C874 917 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 EPCAMP16422 314 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 ZNF18P17022 549 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 CD58P19256 250 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 PON1P27169 355 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 MAGEA11P43364 429 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 ASPAP45381 313 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 SNX16P57768 344 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 LRMPQ12912 555 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 DUSP4Q13115 394 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 STILQ15468 1287 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 MGAT5BQ3V5L5 792 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 CFAP221Q4G0U5 840 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 CYP4A22Q5TCH4 519 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 SPOPLQ6IQ16 392 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 FAM171BQ6P995 826 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 TRIM65Q6PJ69 517 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 VSTM1Q6UX27 236 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 SPATA31D4Q6ZUB0 917 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 DHX40Q8IX18 779 aaKnown RBP8.8□□□□□ -1
SF3A1-208ENST00000485618 CRYBG2Q8N1P7 616 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 VN1R2Q8NFZ6 395 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 SLC7A14Q8TBB6 771 aa8.8□□□□□ -1
SF3A1-208ENST00000485618 KBTBD7Q8WVZ9 684 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms