RNA–Protein interactions for RNA: ENST00000485476.2

LDLRAP1-206, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 5

Gene LDLRAP1, Length 238 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-206ENST00000485476 NFICP08651 508 aa12.86□□□□□ -0.35
LDLRAP1-206ENST00000485476 LONP1P36776 959 aaKnown RBP12.86□□□□□ -0.35
LDLRAP1-206ENST00000485476 PDE6CP51160 858 aa12.86□□□□□ -0.35
LDLRAP1-206ENST00000485476 NR1H3Q13133 447 aa12.86□□□□□ -0.35
LDLRAP1-206ENST00000485476 PLK5Q496M5 336 aa12.86□□□□□ -0.35
LDLRAP1-206ENST00000485476 N4BP2L1Q5TBK1 243 aaPredicted RBP12.86□□□□□ -0.35
LDLRAP1-206ENST00000485476 ADALQ6DHV7 355 aa12.86□□□□□ -0.35
LDLRAP1-206ENST00000485476 MCTP1Q6DN14 999 aa12.86□□□□□ -0.35
LDLRAP1-206ENST00000485476 SLC39A4Q6P5W5 647 aa12.86□□□□□ -0.35
LDLRAP1-206ENST00000485476 TMEM150AQ86TG1 271 aa12.86□□□□□ -0.35
LDLRAP1-206ENST00000485476 KBTBD6Q86V97 674 aa12.86□□□□□ -0.35
LDLRAP1-206ENST00000485476 LRRTM3Q86VH5 581 aa12.86□□□□□ -0.35
LDLRAP1-206ENST00000485476 CPA6Q8N4T0 437 aa12.86□□□□□ -0.35
LDLRAP1-206ENST00000485476 TTC8Q8TAM2 541 aa12.86□□□□□ -0.35
LDLRAP1-206ENST00000485476 USP13Q92995 863 aaPredicted RBP12.86□□□□□ -0.35
LDLRAP1-206ENST00000485476 FIZ1Q96SL8 496 aa12.86□□□□□ -0.35
LDLRAP1-206ENST00000485476 P2RY13Q9BPV8 354 aa12.86□□□□□ -0.35
LDLRAP1-206ENST00000485476 PYM1Q9BRP8 204 aaKnown RBP12.86□□□□□ -0.35
LDLRAP1-206ENST00000485476 SEL1LQ9UBV2 794 aa12.86□□□□□ -0.35
LDLRAP1-206ENST00000485476 NUP210Q8TEM1 1887 aaPredicted RBP12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 NPHP3-ACAD11A0A0J9YXS1 232 aa12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 NOL4O94818 638 aa12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 APBB3O95704 486 aa12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 DDIT3P35638 169 aa12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 MPLP40238 635 aa12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 GALK1P51570 392 aa12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 FAM160A1Q05DH4 1040 aa12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 SF3A2Q15428 464 aaKnown RBP12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 WSCD1Q658N2 575 aa12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 GPIHBP1Q8IV16 184 aa12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 LRRC52Q8N7C0 313 aa12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 MAB21L3Q8N8X9 362 aa12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 CACTINQ8WUQ7 758 aaKnown RBP12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 OSCP1Q8WVF1 389 aa12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 RAD54LQ92698 747 aa12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 ATP2A3Q93084 1043 aa12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 FUBP3Q96I24 572 aaKnown RBP eCLIP12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 DUSP15Q9H1R2 295 aaPredicted RBP12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 EBF3Q9H4W6 596 aa12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 ECT2Q9H8V3 914 aa12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 BLOC1S4Q9NUP1 217 aa12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 EXOC7Q9UPT5 735 aa12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 CHD6Q8TD26 2715 aa12.85□□□□□ -0.35
LDLRAP1-206ENST00000485476 USP24Q9UPU5 2620 aa12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 RNF40O75150 1001 aa12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 KCNK5O95279 499 aa12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 LDHAP00338 332 aaKnown RBP12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 KRT18P05783 430 aaKnown RBP12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 USP17L7P0C7H9 530 aa12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 GJA4P35212 333 aa12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 LHX1P48742 406 aa12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 ACOT2P49753 483 aa12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 MYL7Q01449 175 aa12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 CFAP221Q4G0U5 840 aa12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 ZNF720Q7Z2F6 126 aa12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 TMEM130Q8N3G9 435 aa12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 KRI1Q8N9T8 703 aaKnown RBP12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 FSIP1Q8NA03 581 aa12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 GIPC2Q8TF65 315 aa12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 CD101Q93033 1021 aa12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 PLIN2Q99541 437 aa12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 GDAP2Q9NXN4 497 aa12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 ABI2Q9NYB9 513 aaPredicted RBP12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 EHD2Q9NZN4 543 aa12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 CCL26Q9Y258 94 aa12.84□□□□□ -0.35
LDLRAP1-206ENST00000485476 BCLAF3A2AJT9 711 aaKnown RBP12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 ANKRD63C9JTQ0 380 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 H3BQV1 296 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 HUS1O60921 280 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 PRPF40AO75400 957 aaKnown RBP12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 SEC24BO95487 1268 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 EGFP01133 1207 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 PROS1P07225 676 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 PCSK1P29120 753 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 MAGEA11P43364 429 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 PPP3CCP48454 512 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 MTF1Q14872 753 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 DAB2IPQ5VWQ8 1189 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 RNF43Q68DV7 783 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 TXNDC8Q6A555 127 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 PKN3Q6P5Z2 889 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 CRELD2Q6UXH1 353 aaPredicted RBP12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 DPH6Q7L8W6 267 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 TOP6BLQ8N6T0 577 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 POMGNT1Q8WZA1 660 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 LARP4BQ92615 738 aaKnown RBP12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 CHFRQ96EP1 664 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 KIF2CQ99661 725 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 STRA6Q9BX79 667 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 SMG9Q9H0W8 520 aaKnown RBP12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 DUS2Q9NX74 493 aaKnown RBP12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 GREB1Q4ZG55 1949 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 RALGAPA1Q6GYQ0 2036 aa12.83□□□□□ -0.36
LDLRAP1-206ENST00000485476 TRAV19A0A0A6YYK7 116 aa12.82□□□□□ -0.36
LDLRAP1-206ENST00000485476 OTOL1A6NHN0 477 aaPredicted RBP12.82□□□□□ -0.36
LDLRAP1-206ENST00000485476 KIAA0391O15091 583 aaKnown RBP12.82□□□□□ -0.36
LDLRAP1-206ENST00000485476 CAVIN2O95810 425 aa12.82□□□□□ -0.36
LDLRAP1-206ENST00000485476 FAM163BP0C2L3 166 aa12.82□□□□□ -0.36
LDLRAP1-206ENST00000485476 GAP43P17677 238 aa12.82□□□□□ -0.36
LDLRAP1-206ENST00000485476 PLCG1P19174 1290 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms