RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 VDRP11473 427 aa23.18■■□□□ 1.3
NECAB3-211ENST00000485399 CYP11B1P15538 503 aa23.18■■□□□ 1.3
NECAB3-211ENST00000485399 COL9A1P20849 921 aa23.18■■□□□ 1.3
NECAB3-211ENST00000485399 GNA15P30679 374 aa23.18■■□□□ 1.3
NECAB3-211ENST00000485399 TDRD12Q587J7 1177 aaKnown RBP23.18■■□□□ 1.3
NECAB3-211ENST00000485399 VARS2Q5ST30 1063 aaKnown RBP23.18■■□□□ 1.3
NECAB3-211ENST00000485399 HGSNATQ68CP4 663 aa23.18■■□□□ 1.3
NECAB3-211ENST00000485399 ZNF677Q86XU0 584 aa23.18■■□□□ 1.3
NECAB3-211ENST00000485399 ACBD6Q9BR61 282 aa23.18■■□□□ 1.3
NECAB3-211ENST00000485399 HERC2P3Q9BVR0 1158 aa23.18■■□□□ 1.3
NECAB3-211ENST00000485399 OXCT2Q9BYC2 517 aaPredicted RBP23.18■■□□□ 1.3
NECAB3-211ENST00000485399 HAUS4Q9H6D7 363 aa23.18■■□□□ 1.3
NECAB3-211ENST00000485399 CDH9Q9ULB4 789 aa23.18■■□□□ 1.3
NECAB3-211ENST00000485399 COG5Q9UP83 839 aa23.18■■□□□ 1.3
NECAB3-211ENST00000485399 NME7Q9Y5B8 376 aa23.18■■□□□ 1.3
NECAB3-211ENST00000485399 RB1P06400 928 aa23.17■■□□□ 1.3
NECAB3-211ENST00000485399 MRPL58Q14197 206 aaKnown RBP23.17■■□□□ 1.3
NECAB3-211ENST00000485399 ANKS3Q6ZW76 656 aa23.17■■□□□ 1.3
NECAB3-211ENST00000485399 TAS1R1Q7RTX1 841 aa23.17■■□□□ 1.3
NECAB3-211ENST00000485399 ACOT1Q86TX2 421 aa23.17■■□□□ 1.3
NECAB3-211ENST00000485399 KLHL23Q8NBE8 558 aa23.17■■□□□ 1.3
NECAB3-211ENST00000485399 EPS8L1Q8TE68 723 aa23.17■■□□□ 1.3
NECAB3-211ENST00000485399 GDPD5Q8WTR4 605 aa23.17■■□□□ 1.3
NECAB3-211ENST00000485399 VN1R3Q9BXE9 311 aa23.17■■□□□ 1.3
NECAB3-211ENST00000485399 CHST7Q9NS84 486 aa23.17■■□□□ 1.3
NECAB3-211ENST00000485399 ARHGAP20Q9P2F6 1191 aa23.17■■□□□ 1.3
NECAB3-211ENST00000485399 PUF60Q9UHX1 559 aaKnown RBP23.17■■□□□ 1.3
NECAB3-211ENST00000485399 SSU72P8A0A1W2PR75 194 aa23.16■■□□□ 1.3
NECAB3-211ENST00000485399 THAP12O43422 761 aa23.16■■□□□ 1.3
NECAB3-211ENST00000485399 MED7O43513 233 aa23.16■■□□□ 1.3
NECAB3-211ENST00000485399 CD19P15391 556 aa23.16■■□□□ 1.3
NECAB3-211ENST00000485399 PTPN1P18031 435 aaKnown RBP23.16■■□□□ 1.3
NECAB3-211ENST00000485399 ERVK-21P61565 698 aa23.16■■□□□ 1.3
NECAB3-211ENST00000485399 MAPK8IP2Q13387 824 aaPredicted RBP23.16■■□□□ 1.3
NECAB3-211ENST00000485399 ORC1Q13415 861 aa23.16■■□□□ 1.3
NECAB3-211ENST00000485399 SGO2Q562F6 1265 aa23.16■■□□□ 1.3
NECAB3-211ENST00000485399 ZNF280DQ6N043 979 aa23.16■■□□□ 1.3
NECAB3-211ENST00000485399 KIAA1841Q6NSI8 718 aa23.16■■□□□ 1.3
NECAB3-211ENST00000485399 NOP9Q86U38 636 aaKnown RBP23.16■■□□□ 1.3
NECAB3-211ENST00000485399 VPS36Q86VN1 386 aa23.16■■□□□ 1.3
NECAB3-211ENST00000485399 B3GALNT2Q8NCR0 500 aa23.16■■□□□ 1.3
NECAB3-211ENST00000485399 TGS1Q96RS0 853 aaKnown RBP23.16■■□□□ 1.3
NECAB3-211ENST00000485399 CHP1Q99653 195 aa23.16■■□□□ 1.3
NECAB3-211ENST00000485399 RTP3Q9BQQ7 232 aa23.16■■□□□ 1.3
NECAB3-211ENST00000485399 SYT15Q9BQS2 421 aa23.16■■□□□ 1.3
NECAB3-211ENST00000485399 ACP6Q9NPH0 428 aa23.16■■□□□ 1.3
NECAB3-211ENST00000485399 C5orf67F2Z3F1 127 aa23.15■■□□□ 1.3
NECAB3-211ENST00000485399 HCRTO43612 131 aa23.15■■□□□ 1.3
NECAB3-211ENST00000485399 ACAT1P24752 427 aaKnown RBP23.15■■□□□ 1.3
NECAB3-211ENST00000485399 ANXA13P27216 316 aa23.15■■□□□ 1.3
NECAB3-211ENST00000485399 TSPY1Q01534 308 aa23.15■■□□□ 1.3
NECAB3-211ENST00000485399 STILQ15468 1287 aa23.15■■□□□ 1.3
NECAB3-211ENST00000485399 CTXN3Q4LDR2 81 aa23.15■■□□□ 1.3
NECAB3-211ENST00000485399 RTP2Q5QGT7 225 aa23.15■■□□□ 1.3
NECAB3-211ENST00000485399 ZNF571Q7Z3V5 609 aaPredicted RBP23.15■■□□□ 1.3
NECAB3-211ENST00000485399 TMEM139Q8IV31 216 aa23.15■■□□□ 1.3
NECAB3-211ENST00000485399 ZNF606Q8WXB4 792 aa23.15■■□□□ 1.3
NECAB3-211ENST00000485399 CCDC42Q96M95 316 aa23.15■■□□□ 1.3
NECAB3-211ENST00000485399 AGPAT1Q99943 283 aa23.15■■□□□ 1.3
NECAB3-211ENST00000485399 C17orf80Q9BSJ5 609 aa23.15■■□□□ 1.3
NECAB3-211ENST00000485399 DPEP3Q9H4B8 488 aa23.15■■□□□ 1.3
NECAB3-211ENST00000485399 DEF6Q9H4E7 631 aa23.15■■□□□ 1.3
NECAB3-211ENST00000485399 NHEJ1Q9H9Q4 299 aaPredicted RBP23.15■■□□□ 1.3
NECAB3-211ENST00000485399 LMCD1Q9NZU5 365 aa23.15■■□□□ 1.3
NECAB3-211ENST00000485399 NOCTQ9UK39 431 aaKnown RBP23.15■■□□□ 1.3
NECAB3-211ENST00000485399 LZTS1Q9Y250 596 aa23.15■■□□□ 1.3
NECAB3-211ENST00000485399 OR6C75A6NL08 312 aa23.14■■□□□ 1.3
NECAB3-211ENST00000485399 PLEKP08567 350 aaPredicted RBP23.14■■□□□ 1.3
NECAB3-211ENST00000485399 TNFAIP3P21580 790 aa23.14■■□□□ 1.3
NECAB3-211ENST00000485399 EIF4A3P38919 411 aaKnown RBP23.14■■□□□ 1.3
NECAB3-211ENST00000485399 GLUD2P49448 558 aa23.14■■□□□ 1.3
NECAB3-211ENST00000485399 CDR2Q01850 454 aa23.14■■□□□ 1.3
NECAB3-211ENST00000485399 DSG1Q02413 1049 aa23.14■■□□□ 1.3
NECAB3-211ENST00000485399 GPR65Q8IYL9 337 aa23.14■■□□□ 1.3
NECAB3-211ENST00000485399 CCDC170Q8IYT3 715 aa23.14■■□□□ 1.3
NECAB3-211ENST00000485399 VPS52Q8N1B4 723 aa23.14■■□□□ 1.3
NECAB3-211ENST00000485399 RIN2Q8WYP3 895 aaPredicted RBP23.14■■□□□ 1.3
NECAB3-211ENST00000485399 PIK3R5Q8WYR1 880 aa23.14■■□□□ 1.3
NECAB3-211ENST00000485399 DDX1Q92499 740 aaKnown RBP23.14■■□□□ 1.3
NECAB3-211ENST00000485399 HLA-CQ95604 372 aa23.14■■□□□ 1.3
NECAB3-211ENST00000485399 B3GALT6Q96L58 329 aa23.14■■□□□ 1.3
NECAB3-211ENST00000485399 RAPGEFL1Q9UHV5 662 aa23.14■■□□□ 1.3
NECAB3-211ENST00000485399 SSX2IPQ9Y2D8 614 aa23.14■■□□□ 1.3
NECAB3-211ENST00000485399 CALCAP01258 141 aa23.14■■□□□ 1.29
NECAB3-211ENST00000485399 URODP06132 367 aa23.14■■□□□ 1.29
NECAB3-211ENST00000485399 BRD2P25440 801 aaKnown RBP23.14■■□□□ 1.29
NECAB3-211ENST00000485399 UBE3AQ05086 875 aa23.14■■□□□ 1.29
NECAB3-211ENST00000485399 MAPRE1Q15691 268 aaKnown RBP23.14■■□□□ 1.29
NECAB3-211ENST00000485399 INTS6LQ5JSJ4 861 aaKnown RBP23.14■■□□□ 1.29
NECAB3-211ENST00000485399 TAF3Q5VWG9 929 aa23.14■■□□□ 1.29
NECAB3-211ENST00000485399 ARHGAP17Q68EM7 881 aa23.14■■□□□ 1.29
NECAB3-211ENST00000485399 DCP1BQ8IZD4 617 aaKnown RBP23.14■■□□□ 1.29
NECAB3-211ENST00000485399 SLC20A1Q8WUM9 679 aa23.14■■□□□ 1.29
NECAB3-211ENST00000485399 TFAP2BQ92481 460 aa23.14■■□□□ 1.29
NECAB3-211ENST00000485399 SYT11Q9BT88 431 aa23.14■■□□□ 1.29
NECAB3-211ENST00000485399 C11orf84Q9BUA3 381 aaPredicted RBP23.14■■□□□ 1.29
NECAB3-211ENST00000485399 PDCL3Q9H2J4 239 aa23.14■■□□□ 1.29
NECAB3-211ENST00000485399 MTUS1Q9ULD2 1270 aa23.14■■□□□ 1.29
NECAB3-211ENST00000485399 PLXNA4Q9HCM2 1894 aa23.13■■□□□ 1.29
NECAB3-211ENST00000485399 ATP2C2O75185 946 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms