RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 CEP135Q66GS9 1140 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 STKLD1Q8NE28 680 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 ZSCAN18Q8TBC5 510 aaPredicted RBP13.82□□□□□ -0.2
HDAC1-209ENST00000484305 ERCC4Q92889 916 aaPredicted RBP13.82□□□□□ -0.2
HDAC1-209ENST00000484305 SMARCD2Q92925 531 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 ELSPBP1Q96BH3 223 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 ELMO3Q96BJ8 720 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 CCDC34Q96HJ3 373 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 MRPL45Q9BRJ2 306 aaKnown RBP13.82□□□□□ -0.2
HDAC1-209ENST00000484305 XYLT2Q9H1B5 865 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 SLITRK6Q9H5Y7 841 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 ZFP14Q9HCL3 533 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 NME7Q9Y5B8 376 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 NUP210Q8TEM1 1887 aaPredicted RBP13.81□□□□□ -0.2
HDAC1-209ENST00000484305 VNN1O95497 513 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 PDGFRBP09619 1106 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 AOC1P19801 751 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 NR2F2P24468 414 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 GABRR2P28476 465 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 VIPR2P41587 438 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 PSMC1P62191 440 aaKnown RBP13.81□□□□□ -0.2
HDAC1-209ENST00000484305 BIRC3Q13489 604 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 GRM2Q14416 872 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 VEPH1Q14D04 833 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 NFIL3Q16649 462 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 DDR2Q16832 855 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 C1orf220Q5T0J3 134 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 SDHAF4Q5VUM1 108 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 FAM171BQ6P995 826 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 GPIHBP1Q8IV16 184 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 TMC2Q8TDI7 906 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 SYT15Q9BQS2 421 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 GPR88Q9GZN0 384 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 ATXN3LQ9H3M9 355 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 TBC1D17Q9HA65 648 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 TRPV4Q9HBA0 871 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 IL21Q9HBE4 155 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 ABCB6Q9NP58 842 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 CRTAC1Q9NQ79 661 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 ARHGEF3Q9NR81 526 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 NXF1Q9UBU9 619 aaKnown RBP13.81□□□□□ -0.2
HDAC1-209ENST00000484305 FRMD4BQ9Y2L6 1034 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 GREB1Q4ZG55 1949 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 NCANO14594 1321 aa13.81□□□□□ -0.2
HDAC1-209ENST00000484305 ZNF638Q14966 1978 aaKnown RBP13.8□□□□□ -0.2
HDAC1-209ENST00000484305 STK25O00506 426 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 TACC1O75410 805 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 AKAP3O75969 853 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 FGF19O95750 216 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 STAU1O95793 577 aaKnown RBP13.8□□□□□ -0.2
HDAC1-209ENST00000484305 HMGA1P17096 107 aaKnown RBP13.8□□□□□ -0.2
HDAC1-209ENST00000484305 ATICP31939 592 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 GNL1P36915 607 aaPredicted RBP13.8□□□□□ -0.2
HDAC1-209ENST00000484305 AP3M2P53677 418 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 TNNC1P63316 161 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 CYP4F8P98187 520 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 TCF15Q12870 199 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 ADAM9Q13443 819 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 TAF12Q16514 161 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 CFAP221Q4G0U5 840 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 ZCWPW2Q504Y3 356 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 VITQ6UXI7 678 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 SPATA2LQ8IUW3 424 aaPredicted RBP13.8□□□□□ -0.2
HDAC1-209ENST00000484305 SYAP1Q96A49 352 aaPredicted RBP13.8□□□□□ -0.2
HDAC1-209ENST00000484305 RSPRY1Q96DX4 576 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 TIGD1Q96MW7 591 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 MKNK1Q9BUB5 465 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 SNX25Q9H3E2 840 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 CDH9Q9ULB4 789 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 PCDHA5Q9Y5H7 936 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 TICRRQ7Z2Z1 1910 aa13.8□□□□□ -0.2
HDAC1-209ENST00000484305 IKBKBO14920 756 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 MAPK13O15264 365 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 GADD45BO75293 160 aaPredicted RBP13.79□□□□□ -0.2
HDAC1-209ENST00000484305 FAM163BP0C2L3 166 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 PRCPP42785 496 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 VAMP7P51809 220 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 STARD6P59095 220 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 NHLH1Q02575 133 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 NCOA4Q13772 614 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 ZNF699Q32M78 642 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 ZACNQ401N2 412 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 SLC44A4Q53GD3 710 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 GPR158Q5T848 1215 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 PHLDB3Q6NSJ2 640 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 SV2AQ7L0J3 742 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 TMEM150AQ86TG1 271 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 ARID3BQ8IVW6 561 aaPredicted RBP13.79□□□□□ -0.2
HDAC1-209ENST00000484305 OR6B3Q8NGW1 331 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 SPATA20Q8TB22 786 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 MYLPFQ96A32 169 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 FUBP3Q96I24 572 aaKnown RBP eCLIP13.79□□□□□ -0.2
HDAC1-209ENST00000484305 GSDMAQ96QA5 445 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 PRRX2Q99811 253 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 TRMT61BQ9BVS5 477 aaKnown RBP13.79□□□□□ -0.2
HDAC1-209ENST00000484305 VRTNQ9H8Y1 702 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 RMND1Q9NWS8 449 aa13.79□□□□□ -0.2
HDAC1-209ENST00000484305 CIZ1Q9ULV3 898 aaPredicted RBP13.79□□□□□ -0.2
HDAC1-209ENST00000484305 MAGED2Q9UNF1 606 aaPredicted RBP13.79□□□□□ -0.2
HDAC1-209ENST00000484305 MIA3Q5JRA6 1907 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms