RNA–Protein interactions for RNA: ENST00000484184.1

DNMT3A-213, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-213ENST00000484184 SPATA1Q5VX52 437 aa13.81□□□□□ -0.2
DNMT3A-213ENST00000484184 ARMCX5Q6P1M9 558 aa13.81□□□□□ -0.2
DNMT3A-213ENST00000484184 DTHD1Q6ZMT9 781 aa13.81□□□□□ -0.2
DNMT3A-213ENST00000484184 LRRTM3Q86VH5 581 aa13.81□□□□□ -0.2
DNMT3A-213ENST00000484184 RPLP0P6Q8NHW5 317 aa13.81□□□□□ -0.2
DNMT3A-213ENST00000484184 GIPC2Q8TF65 315 aa13.81□□□□□ -0.2
DNMT3A-213ENST00000484184 KCNN1Q92952 543 aa13.81□□□□□ -0.2
DNMT3A-213ENST00000484184 SEPT5Q99719 369 aaPredicted RBP13.81□□□□□ -0.2
DNMT3A-213ENST00000484184 SCNM1Q9BWG6 230 aa13.81□□□□□ -0.2
DNMT3A-213ENST00000484184 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.81□□□□□ -0.2
DNMT3A-213ENST00000484184 PTPRDP23468 1912 aa13.81□□□□□ -0.2
DNMT3A-213ENST00000484184 GCN1Q92616 2671 aaKnown RBP13.81□□□□□ -0.2
DNMT3A-213ENST00000484184 TMEM8BA6NDV4 472 aa13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 PIRO00625 290 aa13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 APBB3O95704 486 aa13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 HAPLN1P10915 354 aaPredicted RBP13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 CEACAM1P13688 526 aa13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 PLS3P13797 630 aa13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 PDCP20941 246 aa13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 GJA4P35212 333 aa13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 NLRP12P59046 1061 aa13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 STRN3Q13033 797 aa13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 DMC1Q14565 340 aa13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 MGAT5BQ3V5L5 792 aa13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 FBXO43Q4G163 708 aa13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 SLC39A12Q504Y0 691 aa13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 C9orf57Q5W0N0 161 aa13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 PMS2CLQ68D20 193 aa13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 MAB21L3Q8N8X9 362 aa13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 INTS4Q96HW7 963 aaKnown RBP13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 P2RY13Q9BPV8 354 aa13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 TDP1Q9NUW8 608 aa13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 ZMYM5Q9UJ78 669 aa13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 FLNBO75369 2602 aaKnown RBP13.8□□□□□ -0.2
DNMT3A-213ENST00000484184 ACACAQ13085 2346 aa13.79□□□□□ -0.2
DNMT3A-213ENST00000484184 SMG1Q96Q15 3661 aaKnown RBP13.79□□□□□ -0.2
DNMT3A-213ENST00000484184 ANO9A1A5B4 782 aa13.79□□□□□ -0.2
DNMT3A-213ENST00000484184 PATE3B3GLJ2 98 aa13.79□□□□□ -0.2
DNMT3A-213ENST00000484184 LAD1O00515 517 aa13.79□□□□□ -0.2
DNMT3A-213ENST00000484184 ODC1P11926 461 aa13.79□□□□□ -0.2
DNMT3A-213ENST00000484184 SYT1P21579 422 aa13.79□□□□□ -0.2
DNMT3A-213ENST00000484184 PPP2R3AQ06190 1150 aa13.79□□□□□ -0.2
DNMT3A-213ENST00000484184 RAD51AP2Q09MP3 1159 aa13.79□□□□□ -0.2
DNMT3A-213ENST00000484184 VEPH1Q14D04 833 aa13.79□□□□□ -0.2
DNMT3A-213ENST00000484184 KARSQ15046 597 aaKnown RBP13.79□□□□□ -0.2
DNMT3A-213ENST00000484184 TXNDC8Q6A555 127 aa13.79□□□□□ -0.2
DNMT3A-213ENST00000484184 JADE1Q6IE81 842 aa13.79□□□□□ -0.2
DNMT3A-213ENST00000484184 HSCBQ8IWL3 235 aa13.79□□□□□ -0.2
DNMT3A-213ENST00000484184 SNX21Q969T3 373 aa13.79□□□□□ -0.2
DNMT3A-213ENST00000484184 TSPAN18Q96SJ8 248 aa13.79□□□□□ -0.2
DNMT3A-213ENST00000484184 TIPINQ9BVW5 301 aa13.79□□□□□ -0.2
DNMT3A-213ENST00000484184 RAB34Q9BZG1 259 aa13.79□□□□□ -0.2
DNMT3A-213ENST00000484184 TMEM9BQ9NQ34 198 aa13.79□□□□□ -0.2
DNMT3A-213ENST00000484184 INVSQ9Y283 1065 aa13.79□□□□□ -0.2
DNMT3A-213ENST00000484184 APC2O95996 2303 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 ANTXRLA6NF34 631 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 SOBPA7XYQ1 873 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 TADA3O75528 432 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 BCKDHBP21953 392 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 PAX3P23760 479 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 AVPR1AP37288 418 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 NCKAP1LP55160 1127 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 IRX4P78413 519 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 RING1Q06587 406 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 BFSP1Q12934 665 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 ZNF268Q14587 947 aaPredicted RBP13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 PDGFRLQ15198 375 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 ZRSR1Q15695 479 aaKnown RBP13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 KRT79Q5XKE5 535 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 LRSAM1Q6UWE0 723 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 BRAPQ7Z569 592 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 MON1AQ86VX9 555 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 RASSF3Q86WH2 238 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 STKLD1Q8NE28 680 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 GCNAQ96QF7 691 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 ECT2Q9H8V3 914 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 KIF9Q9HAQ2 790 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 STK24Q9Y6E0 443 aa13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 HELZ2Q9BYK8 2649 aaKnown RBP13.78□□□□□ -0.2
DNMT3A-213ENST00000484184 LOC400499M0QZD8 3231 aa13.77□□□□□ -0.2
DNMT3A-213ENST00000484184 VWA3AA6NCI4 1184 aa13.77□□□□□ -0.21
DNMT3A-213ENST00000484184 KHNYNO15037 678 aaKnown RBP13.77□□□□□ -0.21
DNMT3A-213ENST00000484184 XPOTO43592 962 aaKnown RBP13.77□□□□□ -0.21
DNMT3A-213ENST00000484184 PIGRP01833 764 aa13.77□□□□□ -0.21
DNMT3A-213ENST00000484184 NFICP08651 508 aa13.77□□□□□ -0.21
DNMT3A-213ENST00000484184 DDX6P26196 483 aaKnown RBP eCLIP13.77□□□□□ -0.21
DNMT3A-213ENST00000484184 GBP1P32455 592 aa13.77□□□□□ -0.21
DNMT3A-213ENST00000484184 PRPHP41219 470 aa13.77□□□□□ -0.21
DNMT3A-213ENST00000484184 GPR15P49685 360 aa13.77□□□□□ -0.21
DNMT3A-213ENST00000484184 DGKEP52429 567 aa13.77□□□□□ -0.21
DNMT3A-213ENST00000484184 SMTNP53814 917 aa13.77□□□□□ -0.21
DNMT3A-213ENST00000484184 ATP2C1P98194 919 aaPredicted RBP13.77□□□□□ -0.21
DNMT3A-213ENST00000484184 AMPD2Q01433 879 aa13.77□□□□□ -0.21
DNMT3A-213ENST00000484184 HYIQ5T013 277 aa13.77□□□□□ -0.21
DNMT3A-213ENST00000484184 FAM173BQ6P4H8 233 aa13.77□□□□□ -0.21
DNMT3A-213ENST00000484184 SYT2Q8N9I0 419 aaPredicted RBP13.77□□□□□ -0.21
DNMT3A-213ENST00000484184 SPRYD3Q8NCJ5 442 aa13.77□□□□□ -0.21
DNMT3A-213ENST00000484184 SPPL2BQ8TCT7 592 aa13.77□□□□□ -0.21
DNMT3A-213ENST00000484184 C2orf15Q8WU43 125 aaKnown RBP13.77□□□□□ -0.21
DNMT3A-213ENST00000484184 CD101Q93033 1021 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms