RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.31□□□□□ -0.76
HMG20B-210ENST00000483417 KRBA1A5PL33 1030 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 LRRC10BA6NIK2 292 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 KPNA7A9QM74 516 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 PHACTR2O75167 634 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 XYLBO75191 536 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 FGFR1OPO95684 399 aaKnown RBP10.3□□□□□ -0.76
HMG20B-210ENST00000483417 GNA14O95837 355 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 SRFP11831 508 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 MTIF2P46199 727 aaKnown RBP10.3□□□□□ -0.76
HMG20B-210ENST00000483417 FMO5P49326 533 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 PTPN5P54829 565 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 MYL5Q02045 173 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 KCNMA1Q12791 1236 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 BIRC3Q13489 604 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 NCOA4Q13772 614 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 KRT31Q15323 416 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 CTXN3Q4LDR2 81 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 WSCD1Q658N2 575 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 ALYREFQ86V81 257 aaKnown RBP10.3□□□□□ -0.76
HMG20B-210ENST00000483417 OSTM1Q86WC4 334 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 RNF214Q8ND24 703 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 APPL2Q8NEU8 664 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 ST13P5Q8NFI4 369 aaPredicted RBP10.3□□□□□ -0.76
HMG20B-210ENST00000483417 HPDLQ96IR7 371 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 PHOX2BQ99453 314 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 LPIN3Q9BQK8 851 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 RTP3Q9BQQ7 232 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 TUBGCP2Q9BSJ2 902 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 CRACR2AQ9BSW2 395 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 SDCBP2Q9H190 292 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 TSPY26PQ9H489 355 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 TMEM8AQ9HCN3 771 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 SLC2A4RGQ9NR83 387 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 AFF4Q9UHB7 1163 aaKnown RBP10.3□□□□□ -0.76
HMG20B-210ENST00000483417 MAFFQ9ULX9 164 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.3□□□□□ -0.76
HMG20B-210ENST00000483417 NUMBLQ9Y6R0 609 aa10.3□□□□□ -0.76
HMG20B-210ENST00000483417 NRG2O14511 850 aaPredicted RBP10.29□□□□□ -0.76
HMG20B-210ENST00000483417 CYB561D2O14569 222 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 TEX33O43247 280 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 AP5Z1O43299 807 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 XPOTO43592 962 aaKnown RBP10.29□□□□□ -0.76
HMG20B-210ENST00000483417 GALR2O43603 387 aaPredicted RBP10.29□□□□□ -0.76
HMG20B-210ENST00000483417 MOSPD3O75425 235 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 MICAL2O94851 1124 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 CFHP08603 1231 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 PTPN2P17706 415 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 SLC9A1P19634 815 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 AOC1P19801 751 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 PAX3P23760 479 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 LMO2P25791 158 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 GTF2H1P32780 548 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 KLK7P49862 253 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 ARPP19P56211 112 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 LRMPQ12912 555 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 TRPC3Q13507 836 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 SLC5A9Q2M3M2 681 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 SOWAHAQ2M3V2 549 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 WDR72Q3MJ13 1102 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 PABPC1LQ4VXU2 614 aaKnown RBP10.29□□□□□ -0.76
HMG20B-210ENST00000483417 VWA3BQ502W6 1294 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 PRSS36Q5K4E3 855 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 KRT39Q6A163 491 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 DSTYKQ6XUX3 929 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 RNF19BQ6ZMZ0 732 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 LIMS2Q7Z4I7 341 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 NPAS3Q8IXF0 933 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 SIX5Q8N196 739 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 EHBP1Q8NDI1 1231 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 TMEM209Q96SK2 561 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 MRPL45Q9BRJ2 306 aaKnown RBP10.29□□□□□ -0.76
HMG20B-210ENST00000483417 OXCT2Q9BYC2 517 aaPredicted RBP10.29□□□□□ -0.76
HMG20B-210ENST00000483417 CRISPLD1Q9H336 500 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 CYP4F11Q9HBI6 524 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 RAB20Q9NX57 234 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 NXF1Q9UBU9 619 aaKnown RBP10.29□□□□□ -0.76
HMG20B-210ENST00000483417 LIMA1Q9UHB6 759 aaKnown RBP10.29□□□□□ -0.76
HMG20B-210ENST00000483417 ITGA11Q9UKX5 1188 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 COQ4Q9Y3A0 265 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 INSL5Q9Y5Q6 135 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 SNX9Q9Y5X1 595 aa10.29□□□□□ -0.76
HMG20B-210ENST00000483417 SMTNL1A8MU46 457 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 AFPP02771 609 aaKnown RBP10.28□□□□□ -0.76
HMG20B-210ENST00000483417 CYP11A1P05108 521 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 RHOP08100 348 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 TYMPP19971 482 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 CDK11BP21127 795 aaKnown RBP10.28□□□□□ -0.76
HMG20B-210ENST00000483417 ELF1P32519 619 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 CCR2P41597 374 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 RAP1GAPP47736 663 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 TAF6P49848 677 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 MRE11P49959 708 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 COPB1P53618 953 aaKnown RBP10.28□□□□□ -0.76
HMG20B-210ENST00000483417 AP3M2P53677 418 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 EPHA5P54756 1037 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 GPC5P78333 572 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 YWHAHQ04917 246 aaPredicted RBP10.28□□□□□ -0.76
HMG20B-210ENST00000483417 ENPEPQ07075 957 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 ADCY1Q08828 1119 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms