RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 CRTC1Q6UUV9 634 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 LARP4Q71RC2 724 aaKnown RBP eCLIP4.58□□□□□ -1.68
VPS41-212ENST00000482217 RALYLQ86SE5 291 aaKnown RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 CLEC14AQ86T13 490 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 ELOA2Q8IYF1 753 aaPredicted RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 ADGRG2Q8IZP9 1017 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 THEMISQ8N1K5 641 aaPredicted RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 MIER2Q8N344 545 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 GLB1L3Q8NCI6 653 aaPredicted RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 ZNF540Q8NDQ6 660 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 GOT1L1Q8NHS2 421 aaPredicted RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 BICD2Q8TD16 824 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 DIS3LQ8TF46 1054 aaKnown RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 ZNF606Q8WXB4 792 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 MBD6Q96DN6 1003 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 SLC2A13Q96QE2 648 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 NTPCRQ9BSD7 190 aaKnown RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 SORBS1Q9BX66 1292 aaKnown RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 TMEM120AQ9BXJ8 343 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 SIL1Q9H173 461 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 OR10A2Q9H208 303 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 DEF6Q9H4E7 631 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 RPAP3Q9H6T3 665 aaPredicted RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 OLA1Q9NTK5 396 aaKnown RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 NSMCE4AQ9NXX6 385 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 UTP6Q9NYH9 597 aaKnown RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 CGNQ9P2M7 1197 aaKnown RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 CFDP1Q9UEE9 299 aaPredicted RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 LAMP5Q9UJQ1 280 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 TUBD1Q9UJT1 453 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 MTF2Q9Y483 593 aaPredicted RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 EPN1Q9Y6I3 576 aaPredicted RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 RSF1Q96T23 1441 aaPredicted RBP4.57□□□□□ -1.68
VPS41-212ENST00000482217 NCANO14594 1321 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 VGLL3A8MV65 326 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 B8ZZF3 427 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 INO80B-WBP1J3KQ70 363 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 SGTAO43765 313 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 KLHL41O60662 606 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 PHF2O75151 1096 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 LTA4HP09960 611 aaKnown RBP4.57□□□□□ -1.68
VPS41-212ENST00000482217 SFTPCP11686 197 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 HNRNPLP14866 589 aaKnown RBP eCLIP4.57□□□□□ -1.686e-15■■■■■ 32.5
VPS41-212ENST00000482217 STMN1P16949 149 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 XBP1P17861 261 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 CLCN2P51788 898 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 SH3BGRP55822 239 aaPredicted RBP4.57□□□□□ -1.68
VPS41-212ENST00000482217 IL1RL1Q01638 556 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 ICA1Q05084 483 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 CCDC15Q0P6D6 951 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 RASA2Q15283 850 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 ZNF568Q3ZCX4 644 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 PRR16Q569H4 304 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 C19orf54Q5BKX5 351 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 FAM209BQ5JX69 171 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 ATAT1Q5SQI0 421 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 AGBL4Q5VU57 503 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 HAUS3Q68CZ6 603 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 SLC30A6Q6NXT4 461 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 JMJD6Q6NYC1 403 aaPredicted RBP4.57□□□□□ -1.68
VPS41-212ENST00000482217 ALKBH5Q6P6C2 394 aaKnown RBP4.57□□□□□ -1.68
VPS41-212ENST00000482217 SHQ1Q6PI26 577 aaKnown RBP4.57□□□□□ -1.68
VPS41-212ENST00000482217 DSTYKQ6XUX3 929 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 USP30Q70CQ3 517 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 TAS1R1Q7RTX1 841 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 ZER1Q7Z7L7 766 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 SLC9B2Q86UD5 537 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 TBC1D21Q8IYX1 336 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 CACNA2D3Q8IZS8 1091 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 PLA2G15Q8NCC3 412 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 FEZF2Q8TBJ5 459 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 SPATA18Q8TC71 538 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 SMCR8Q8TEV9 937 aaPredicted RBP4.57□□□□□ -1.68
VPS41-212ENST00000482217 ZNF75CPQ92670 426 aaPredicted RBP4.57□□□□□ -1.68
VPS41-212ENST00000482217 HPS3Q969F9 1004 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 SLC7A6OSQ96CW6 309 aaPredicted RBP4.57□□□□□ -1.68
VPS41-212ENST00000482217 C1orf74Q96LT6 269 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 ZSCAN31Q96LW9 406 aaPredicted RBP4.57□□□□□ -1.68
VPS41-212ENST00000482217 UIMC1Q96RL1 719 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 ADI1Q9BV57 179 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 MAGEH1Q9H213 219 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 FAM204AQ9H8W3 233 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 C14orf93Q9H972 538 aaKnown RBP4.57□□□□□ -1.68
VPS41-212ENST00000482217 STARD7Q9NQZ5 370 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 RBM12Q9NTZ6 932 aaKnown RBP4.57□□□□□ -1.68
VPS41-212ENST00000482217 POGKQ9P215 609 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 COG5Q9UP83 839 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 ZDHHC9Q9Y397 364 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 C2CD2Q9Y426 696 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 KNSTRNQ9Y448 316 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 ZNF711Q9Y462 761 aa4.57□□□□□ -1.68
VPS41-212ENST00000482217 RPTORQ8N122 1335 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 A0A087X0M5 115 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 A0A1B0GX30 115 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 FAM171A2A8MVW0 826 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 PRRG2O14669 202 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 HOXC11O43248 304 aaPredicted RBP4.56□□□□□ -1.68
VPS41-212ENST00000482217 MTSS1O43312 755 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 FOXD2O60548 495 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms