RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 BARX2Q9UMQ3 279 aaPredicted RBP12.35□□□□□ -0.43
HPS4-212ENST00000481910 PCDHB4Q9Y5E5 795 aa12.35□□□□□ -0.43
HPS4-212ENST00000481910 GOLGA6L6A8MZA4 724 aa12.34□□□□□ -0.43
HPS4-212ENST00000481910 GRM6O15303 877 aa12.34□□□□□ -0.43
HPS4-212ENST00000481910 CILPO75339 1184 aa12.34□□□□□ -0.43
HPS4-212ENST00000481910 URODP06132 367 aa12.34□□□□□ -0.43
HPS4-212ENST00000481910 CA8P35219 290 aa12.34□□□□□ -0.43
HPS4-212ENST00000481910 NDST1P52848 882 aa12.34□□□□□ -0.43
HPS4-212ENST00000481910 DSG1Q02413 1049 aa12.34□□□□□ -0.43
HPS4-212ENST00000481910 INCA1Q0VD86 236 aa12.34□□□□□ -0.43
HPS4-212ENST00000481910 BMS1Q14692 1282 aaKnown RBP12.34□□□□□ -0.43
HPS4-212ENST00000481910 CTXN3Q4LDR2 81 aa12.34□□□□□ -0.43
HPS4-212ENST00000481910 TMEM270Q6UE05 265 aa12.34□□□□□ -0.43
HPS4-212ENST00000481910 PRSS55Q6UWB4 352 aaPredicted RBP12.34□□□□□ -0.43
HPS4-212ENST00000481910 PPFIBP1Q86W92 1011 aa12.34□□□□□ -0.43
HPS4-212ENST00000481910 ATL2Q8NHH9 583 aa12.34□□□□□ -0.43
HPS4-212ENST00000481910 SPATA18Q8TC71 538 aa12.34□□□□□ -0.43
HPS4-212ENST00000481910 MICAL1Q8TDZ2 1067 aa12.34□□□□□ -0.43
HPS4-212ENST00000481910 TCF25Q9BQ70 676 aa12.34□□□□□ -0.43
HPS4-212ENST00000481910 TLR9Q9NR96 1032 aa12.34□□□□□ -0.43
HPS4-212ENST00000481910 STXBP5LQ9Y2K9 1186 aa12.34□□□□□ -0.43
HPS4-212ENST00000481910 H7C4K7 107 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 FOXN3O00409 490 aaPredicted RBP12.33□□□□□ -0.44
HPS4-212ENST00000481910 HCRTO43612 131 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 CSPG5O95196 566 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 GYPCP04921 128 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 CTSAP10619 480 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 KRT5P13647 590 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 ACO1P21399 889 aaKnown RBP12.33□□□□□ -0.44
HPS4-212ENST00000481910 DNAJB1P25685 340 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 CASP14P31944 242 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 ERVFC1P60507 584 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 TRIM14Q14142 442 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 MRPL58Q14197 206 aaKnown RBP12.33□□□□□ -0.44
HPS4-212ENST00000481910 KIAA0319Q5VV43 1072 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 PDXDC1Q6P996 788 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 UNC93AQ86WB7 457 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 OSTM1Q86WC4 334 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 ZNF397Q8NF99 534 aaPredicted RBP12.33□□□□□ -0.44
HPS4-212ENST00000481910 LNX1Q8TBB1 728 aaPredicted RBP12.33□□□□□ -0.44
HPS4-212ENST00000481910 AUTS2Q8WXX7 1259 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 PIK3R5Q8WYR1 880 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 SHC3Q92529 594 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 NT5C1AQ9BXI3 368 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 EDEM3Q9BZQ6 932 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 TTYH3Q9C0H2 523 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 ZBP1Q9H171 429 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 ENTPD7Q9NQZ7 604 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 CAPN11Q9UMQ6 739 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 LUC7L2Q9Y383 392 aaKnown RBP12.33□□□□□ -0.44
HPS4-212ENST00000481910 F8VZ95 297 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 RNF225M0QZC1 329 aaPredicted RBP12.33□□□□□ -0.44
HPS4-212ENST00000481910 CXCL14O95715 111 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 TPM1P09493 284 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 PNMA6AP0CW24 399 aaPredicted RBP12.33□□□□□ -0.44
HPS4-212ENST00000481910 ACAT1P24752 427 aaKnown RBP12.33□□□□□ -0.44
HPS4-212ENST00000481910 PCSK1P29120 753 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 CDC25BP30305 580 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 STAT1P42224 750 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 JAM2P57087 298 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 ORC1Q13415 861 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 PSMD5Q16401 504 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.33□□□□□ -0.44
HPS4-212ENST00000481910 UBR7Q8N806 425 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 WHAMMQ8TF30 809 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 ACBD6Q9BR61 282 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 TACO1Q9BSH4 297 aaKnown RBP12.33□□□□□ -0.44
HPS4-212ENST00000481910 GPR88Q9GZN0 384 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 DNAI2Q9GZS0 605 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 HMGXB4Q9UGU5 601 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 RSPH14Q9UHP6 348 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 SSX2IPQ9Y2D8 614 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 NME7Q9Y5B8 376 aa12.33□□□□□ -0.44
HPS4-212ENST00000481910 LAMA2P24043 3122 aaKnown RBP12.32□□□□□ -0.44
HPS4-212ENST00000481910 TSC2P49815 1807 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 A0A1W2PQJ5 194 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 EPOPA6NHQ4 379 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 RFXAPO00287 272 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 CCP110O43303 1012 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 RPL17P18621 184 aaKnown RBP12.32□□□□□ -0.44
HPS4-212ENST00000481910 SOX5P35711 763 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 FXR1P51114 621 aaKnown RBP eCLIP12.32□□□□□ -0.44
HPS4-212ENST00000481910 NUBP1P53384 320 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 RAD23BP54727 409 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 ZBED6P86452 979 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 CAMK1Q14012 370 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 GET4Q7L5D6 327 aaPredicted RBP12.32□□□□□ -0.44
HPS4-212ENST00000481910 ACOT1Q86TX2 421 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 SPC24Q8NBT2 197 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 RBBP8NLQ8NC74 664 aaPredicted RBP12.32□□□□□ -0.44
HPS4-212ENST00000481910 OR10T2Q8NGX3 314 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 GDPD5Q8WTR4 605 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 BAP1Q92560 729 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 TMEM176AQ96HP8 235 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 TNIP3Q96KP6 325 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 HEXIM2Q96MH2 286 aaKnown RBP12.32□□□□□ -0.44
HPS4-212ENST00000481910 TWNKQ96RR1 684 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 RTP3Q9BQQ7 232 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 DPEP3Q9H4B8 488 aa12.32□□□□□ -0.44
HPS4-212ENST00000481910 CDH9Q9ULB4 789 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms