RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 PHLDB3Q6NSJ2 640 aa18.22■□□□□ 0.51
HSPG2-209ENST00000480900 ENGASEQ8NFI3 743 aa18.22■□□□□ 0.51
HSPG2-209ENST00000480900 TMC2Q8TDI7 906 aa18.22■□□□□ 0.51
HSPG2-209ENST00000480900 SYAP1Q96A49 352 aaPredicted RBP18.22■□□□□ 0.51
HSPG2-209ENST00000480900 MMS19Q96T76 1030 aa18.22■□□□□ 0.51
HSPG2-209ENST00000480900 SYT15Q9BQS2 421 aa18.22■□□□□ 0.51
HSPG2-209ENST00000480900 SLITRK6Q9H5Y7 841 aa18.22■□□□□ 0.51
HSPG2-209ENST00000480900 TBC1D17Q9HA65 648 aa18.22■□□□□ 0.51
HSPG2-209ENST00000480900 CDH9Q9ULB4 789 aa18.22■□□□□ 0.51
HSPG2-209ENST00000480900 FRMD4BQ9Y2L6 1034 aa18.22■□□□□ 0.51
HSPG2-209ENST00000480900 COL4A2P08572 1712 aa18.21■□□□□ 0.51
HSPG2-209ENST00000480900 MAPK13O15264 365 aa18.21■□□□□ 0.51
HSPG2-209ENST00000480900 GALR2O43603 387 aaPredicted RBP18.21■□□□□ 0.51
HSPG2-209ENST00000480900 TACC1O75410 805 aa18.21■□□□□ 0.51
HSPG2-209ENST00000480900 RFX1P22670 979 aa18.21■□□□□ 0.51
HSPG2-209ENST00000480900 MYL6P60660 151 aa18.21■□□□□ 0.51
HSPG2-209ENST00000480900 TNNC1P63316 161 aa18.21■□□□□ 0.51
HSPG2-209ENST00000480900 NHLH1Q02575 133 aa18.21■□□□□ 0.51
HSPG2-209ENST00000480900 SNW1Q13573 536 aaKnown RBP18.21■□□□□ 0.51
HSPG2-209ENST00000480900 TAF12Q16514 161 aa18.21■□□□□ 0.51
HSPG2-209ENST00000480900 CFAP221Q4G0U5 840 aa18.21■□□□□ 0.51
HSPG2-209ENST00000480900 TDRD10Q5VZ19 366 aaKnown RBP18.21■□□□□ 0.51
HSPG2-209ENST00000480900 FAM171BQ6P995 826 aa18.21■□□□□ 0.51
HSPG2-209ENST00000480900 ZSCAN18Q8TBC5 510 aaPredicted RBP18.21■□□□□ 0.51
HSPG2-209ENST00000480900 FUBP3Q96I24 572 aaKnown RBP eCLIP18.21■□□□□ 0.51
HSPG2-209ENST00000480900 SHDQ96IW2 340 aa18.21■□□□□ 0.51
HSPG2-209ENST00000480900 PI4K2AQ9BTU6 479 aa18.21■□□□□ 0.51
HSPG2-209ENST00000480900 PLA2G2FQ9BZM2 168 aa18.21■□□□□ 0.51
HSPG2-209ENST00000480900 XYLT2Q9H1B5 865 aa18.21■□□□□ 0.51
HSPG2-209ENST00000480900 VRTNQ9H8Y1 702 aa18.21■□□□□ 0.51
HSPG2-209ENST00000480900 GTF3C4Q9UKN8 822 aa18.21■□□□□ 0.51
HSPG2-209ENST00000480900 CIZ1Q9ULV3 898 aaPredicted RBP18.21■□□□□ 0.51
HSPG2-209ENST00000480900 KIF26AQ9ULI4 1882 aaPredicted RBP18.2■□□□□ 0.5
HSPG2-209ENST00000480900 HCRTO43612 131 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 PHACTR2O75167 634 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 LMO2P25791 158 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 GABRR2P28476 465 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 CDC25CP30307 473 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 RPL10AP62906 217 aaKnown RBP18.2■□□□□ 0.5
HSPG2-209ENST00000480900 TCF15Q12870 199 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 BIRC3Q13489 604 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 PNOCQ13519 176 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 MAPRE1Q15691 268 aaKnown RBP18.2■□□□□ 0.5
HSPG2-209ENST00000480900 WDR72Q3MJ13 1102 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 ARHGAP15Q53QZ3 475 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 CEP135Q66GS9 1140 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 C4orf50Q6ZRC1 276 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 SPATA2LQ8IUW3 424 aaPredicted RBP18.2■□□□□ 0.5
HSPG2-209ENST00000480900 GIPC2Q8TF65 315 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 DEPDC1BQ8WUY9 529 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 E2F7Q96AV8 911 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 TIGD1Q96MW7 591 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 GCNAQ96QF7 691 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 ATXN3LQ9H3M9 355 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 IL21Q9HBE4 155 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 RMND1Q9NWS8 449 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 MAPK8IP1Q9UQF2 711 aa18.2■□□□□ 0.5
HSPG2-209ENST00000480900 MYBPHLA2RUH7 354 aa18.19■□□□□ 0.5
HSPG2-209ENST00000480900 STK25O00506 426 aa18.19■□□□□ 0.5
HSPG2-209ENST00000480900 IKBKBO14920 756 aa18.19■□□□□ 0.5
HSPG2-209ENST00000480900 C4BPAP04003 597 aaKnown RBP18.19■□□□□ 0.5
HSPG2-209ENST00000480900 NR2F2P24468 414 aa18.19■□□□□ 0.5
HSPG2-209ENST00000480900 CYP2F1P24903 491 aa18.19■□□□□ 0.5
HSPG2-209ENST00000480900 RPL13P26373 211 aaKnown RBP18.19■□□□□ 0.5
HSPG2-209ENST00000480900 MAGEA11P43364 429 aa18.19■□□□□ 0.5
HSPG2-209ENST00000480900 STARD6P59095 220 aa18.19■□□□□ 0.5
HSPG2-209ENST00000480900 PRKCQQ04759 706 aa18.19■□□□□ 0.5
HSPG2-209ENST00000480900 MLF2Q15773 248 aaPredicted RBP18.19■□□□□ 0.5
HSPG2-209ENST00000480900 CCDC142Q17RM4 750 aa18.19■□□□□ 0.5
HSPG2-209ENST00000480900 ZCWPW2Q504Y3 356 aa18.19■□□□□ 0.5
HSPG2-209ENST00000480900 STXBP5Q5T5C0 1151 aa18.19■□□□□ 0.5
HSPG2-209ENST00000480900 DNASE1L2Q92874 299 aa18.19■□□□□ 0.5
HSPG2-209ENST00000480900 GSDMAQ96QA5 445 aa18.19■□□□□ 0.5
HSPG2-209ENST00000480900 MKNK1Q9BUB5 465 aa18.19■□□□□ 0.5
HSPG2-209ENST00000480900 TRMT61BQ9BVS5 477 aaKnown RBP18.19■□□□□ 0.5
HSPG2-209ENST00000480900 IRF2BPLQ9H1B7 796 aa18.19■□□□□ 0.5
HSPG2-209ENST00000480900 SNX25Q9H3E2 840 aa18.19■□□□□ 0.5
HSPG2-209ENST00000480900 CRTAC1Q9NQ79 661 aa18.19■□□□□ 0.5
HSPG2-209ENST00000480900 ZMYM5Q9UJ78 669 aa18.19■□□□□ 0.5
HSPG2-209ENST00000480900 PI15O43692 258 aa18.18■□□□□ 0.5
HSPG2-209ENST00000480900 ATP2C2O75185 946 aa18.18■□□□□ 0.5
HSPG2-209ENST00000480900 SMC2O95347 1197 aa18.18■□□□□ 0.5
HSPG2-209ENST00000480900 CSH1P0DML2 217 aa18.18■□□□□ 0.5
HSPG2-209ENST00000480900 CSH2P0DML3 217 aa18.18■□□□□ 0.5
HSPG2-209ENST00000480900 HMGA1P17096 107 aaKnown RBP18.18■□□□□ 0.5
HSPG2-209ENST00000480900 PSMC3P17980 439 aa18.18■□□□□ 0.5
HSPG2-209ENST00000480900 WEE1P30291 646 aa18.18■□□□□ 0.5
HSPG2-209ENST00000480900 GNL1P36915 607 aaPredicted RBP18.18■□□□□ 0.5
HSPG2-209ENST00000480900 VIPR2P41587 438 aa18.18■□□□□ 0.5
HSPG2-209ENST00000480900 PSMC1P62191 440 aaKnown RBP18.18■□□□□ 0.5
HSPG2-209ENST00000480900 DLG4P78352 724 aa18.18■□□□□ 0.5
HSPG2-209ENST00000480900 ENPEPQ07075 957 aa18.18■□□□□ 0.5
HSPG2-209ENST00000480900 NCOA4Q13772 614 aa18.18■□□□□ 0.5
HSPG2-209ENST00000480900 GRM2Q14416 872 aa18.18■□□□□ 0.5
HSPG2-209ENST00000480900 ZNF699Q32M78 642 aa18.18■□□□□ 0.5
HSPG2-209ENST00000480900 EDRF1Q3B7T1 1238 aa18.18■□□□□ 0.5
HSPG2-209ENST00000480900 ZACNQ401N2 412 aa18.18■□□□□ 0.5
HSPG2-209ENST00000480900 SLC44A4Q53GD3 710 aa18.18■□□□□ 0.5
HSPG2-209ENST00000480900 GPR158Q5T848 1215 aa18.18■□□□□ 0.5
HSPG2-209ENST00000480900 VITQ6UXI7 678 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms