RNA–Protein interactions for RNA: ENST00000480828.5

UBE2F-221, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 802 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-221ENST00000480828 SNX27Q96L92 541 aa4.21□□□□□ -1.74
UBE2F-221ENST00000480828 MRI1Q9BV20 369 aa4.21□□□□□ -1.74
UBE2F-221ENST00000480828 TINAGL1Q9GZM7 467 aaPredicted RBP4.21□□□□□ -1.74
UBE2F-221ENST00000480828 MS4A7Q9GZW8 240 aaPredicted RBP4.21□□□□□ -1.74
UBE2F-221ENST00000480828 HEYLQ9NQ87 328 aaPredicted RBP4.21□□□□□ -1.74
UBE2F-221ENST00000480828 WASH6PQ9NQA3 447 aa4.21□□□□□ -1.74
UBE2F-221ENST00000480828 CLIC5Q9NZA1 410 aa4.21□□□□□ -1.74
UBE2F-221ENST00000480828 NTMQ9P121 344 aa4.21□□□□□ -1.74
UBE2F-221ENST00000480828 NCDNQ9UBB6 729 aa4.21□□□□□ -1.74
UBE2F-221ENST00000480828 SLC45A1Q9Y2W3 748 aa4.21□□□□□ -1.74
UBE2F-221ENST00000480828 HS3ST4Q9Y661 456 aa4.21□□□□□ -1.74
UBE2F-221ENST00000480828 CXorf49A8MYA2 514 aaPredicted RBP4.2□□□□□ -1.74
UBE2F-221ENST00000480828 B4E171 279 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 H7C4K7 107 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 MYO1CO00159 1063 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 SOAT2O75908 522 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 BAIAP3O94812 1187 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 ITGB3P05106 788 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 ITGA2BP08514 1039 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 ZNF888P0CJ79 500 aaPredicted RBP4.2□□□□□ -1.74
UBE2F-221ENST00000480828 CKBP12277 381 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 PECAM1P16284 738 aaPredicted RBP4.2□□□□□ -1.74
UBE2F-221ENST00000480828 BTF3P20290 206 aaKnown RBP4.2□□□□□ -1.74
UBE2F-221ENST00000480828 RPL13P26373 211 aaKnown RBP4.2□□□□□ -1.74
UBE2F-221ENST00000480828 ACVR2AP27037 513 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 KRT9P35527 623 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 ADD2P35612 726 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 TSPAN7P41732 249 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 COPAP53621 1224 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 SEC24CP53992 1094 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 RAP2BP61225 183 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 POU6F2P78424 691 aaPredicted RBP4.2□□□□□ -1.74
UBE2F-221ENST00000480828 APBA1Q02410 837 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 ATP2B3Q16720 1220 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 ADCK5Q3MIX3 580 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 FAM47AQ5JRC9 791 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 ANKRD45Q5TZF3 282 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 CCDC30Q5VVM6 783 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 OTUD7BQ6GQQ9 843 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 KIAA0408Q6ZU52 694 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 SEM1Q6ZVN7 128 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 ZNF365Q70YC5 407 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 KRT28Q7Z3Y7 464 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 GATAD2AQ86YP4 633 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 HERC6Q8IVU3 1022 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 YAF2Q8IY57 180 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 COLGALT2Q8IYK4 626 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 ANKRD53Q8N9V6 530 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 TMIEQ8NEW7 156 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 SCAMP5Q8TAC9 235 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 SPPL3Q8TCT6 385 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 CSGALNACT1Q8TDX6 532 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 AFG1LQ8WV93 481 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 IPCEF1Q8WWN9 437 aaPredicted RBP4.2□□□□□ -1.74
UBE2F-221ENST00000480828 HERVK_113Q902F9 699 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 HTRA1Q92743 480 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 HDAC2Q92769 488 aaKnown RBP4.2□□□□□ -1.74
UBE2F-221ENST00000480828 EID2BQ96D98 161 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 ERP27Q96DN0 273 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 RPL10LQ96L21 214 aaKnown RBP4.2□□□□□ -1.74
UBE2F-221ENST00000480828 BARD1Q99728 777 aaKnown RBP4.2□□□□□ -1.74
UBE2F-221ENST00000480828 NDC1Q9BTX1 674 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 UNC45AQ9H3U1 944 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 TMEM8AQ9HCN3 771 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 SAYSD1Q9NPB0 183 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 USP40Q9NVE5 1235 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 FBXO34Q9NWN3 711 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 JKAMPQ9P055 326 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 LPAR3Q9UBY5 353 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 ZMYND8Q9ULU4 1186 aaPredicted RBP4.2□□□□□ -1.74
UBE2F-221ENST00000480828 TMX2Q9Y320 296 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 PLEKHM1Q9Y4G2 1056 aa4.2□□□□□ -1.74
UBE2F-221ENST00000480828 HOXC11O43248 304 aaPredicted RBP4.19□□□□□ -1.74
UBE2F-221ENST00000480828 FIBPO43427 364 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 FAM155BO75949 473 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 ACTL6BO94805 426 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 KIF20AO95235 890 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 VSIG10L2P0DP72 767 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 PIM1P11309 404 aaPredicted RBP4.19□□□□□ -1.74
UBE2F-221ENST00000480828 XBP1P17861 261 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 EGR1P18146 543 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 CST5P28325 142 aaPredicted RBP4.19□□□□□ -1.74
UBE2F-221ENST00000480828 IL13P35225 146 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 PTTG1IPP53801 180 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 NR1H2P55055 460 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 PDE1CQ14123 709 aaPredicted RBP4.19□□□□□ -1.74
UBE2F-221ENST00000480828 SLC29A2Q14542 456 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 KCNAB1Q14722 419 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 DLGAP5Q15398 846 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 MAPKAPK3Q16644 382 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 TBR1Q16650 682 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 UBXN11Q5T124 520 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 UTP14CQ5TAP6 766 aaKnown RBP4.19□□□□□ -1.74
UBE2F-221ENST00000480828 AGAP9Q5VTM2 703 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 AGBL4Q5VU57 503 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 KCTD20Q7Z5Y7 419 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 USP37Q86T82 979 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 CCDC28AQ8IWP9 274 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 TTLL6Q8N841 843 aa4.19□□□□□ -1.74
UBE2F-221ENST00000480828 FAM46DQ8NEK8 389 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms