RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 TUBGCP2Q9BSJ2 902 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 TTLL2Q9BWV7 592 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 NT5C1AQ9BXI3 368 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 EDEM3Q9BZQ6 932 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 NDST4Q9H3R1 872 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 TRPV4Q9HBA0 871 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 TRPV5Q9NQA5 729 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 MAN1C1Q9NR34 630 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 DDX43Q9NXZ2 648 aaKnown RBP5.43□□□□□ -1.54
HDAC6-223ENST00000480525 CLDND1Q9NY35 253 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 OBP2AQ9NY56 170 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 IL37Q9NZH6 218 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 EPS15L1Q9UBC2 864 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 MAGEC2Q9UBF1 373 aaPredicted RBP5.43□□□□□ -1.54
HDAC6-223ENST00000480525 UXTQ9UBK9 157 aaPredicted RBP5.43□□□□□ -1.54
HDAC6-223ENST00000480525 APEX2Q9UBZ4 518 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 NR2E1Q9Y466 385 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 PCDHB5Q9Y5E4 795 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 INSL5Q9Y5Q6 135 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 MYO16Q9Y6X6 1858 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 C5orf42Q9H799 3197 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 VCANP13611 3396 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.42□□□□□ -1.54
HDAC6-223ENST00000480525 KCNJ18B7U540 433 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 BIN1O00499 593 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 NOL4O94818 638 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 RTN3O95197 1032 aaPredicted RBP5.42□□□□□ -1.54
HDAC6-223ENST00000480525 KRT19P08727 400 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 HAPLN1P10915 354 aaPredicted RBP5.42□□□□□ -1.54
HDAC6-223ENST00000480525 CPB1P15086 417 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 EPCAMP16422 314 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 PTPN2P17706 415 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 CDC25CP30307 473 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 GNL1P36915 607 aaPredicted RBP5.42□□□□□ -1.54
HDAC6-223ENST00000480525 GCLMP48507 274 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 RPL34P49207 117 aaKnown RBP5.42□□□□□ -1.54
HDAC6-223ENST00000480525 PSEN1P49768 467 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 ZNF165P49910 485 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 ZNF132P52740 706 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 EPHB3P54753 998 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 BPIFB4P59827 614 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 TPM4P67936 248 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 ZP2Q05996 745 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 CUL2Q13617 745 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 KCNJ12Q14500 433 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 ZNF268Q14587 947 aaPredicted RBP5.42□□□□□ -1.54
HDAC6-223ENST00000480525 VEPH1Q14D04 833 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 IQCB1Q15051 598 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 TPD52L1Q16890 204 aaPredicted RBP5.42□□□□□ -1.54
HDAC6-223ENST00000480525 EXOC3L4Q17RC7 722 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 VWA3BQ502W6 1294 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 DCAF17Q5H9S7 520 aaPredicted RBP5.42□□□□□ -1.54
HDAC6-223ENST00000480525 PPM1LQ5SGD2 360 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 TCERG1LQ5VWI1 586 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 IQCEQ6IPM2 695 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 PTCRAQ6ISU1 281 aaPredicted RBP5.42□□□□□ -1.54
HDAC6-223ENST00000480525 KLHL10Q6JEL2 608 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 PPP1R2P3Q6NXS1 205 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 CAVIN1Q6NZI2 390 aaKnown RBP5.42□□□□□ -1.54
HDAC6-223ENST00000480525 KLHDC10Q6PID8 442 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 C1orf228Q6PIY5 440 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 PRSS55Q6UWB4 352 aaPredicted RBP5.42□□□□□ -1.54
HDAC6-223ENST00000480525 RSPO2Q6UXX9 243 aaPredicted RBP5.42□□□□□ -1.54
HDAC6-223ENST00000480525 BEND5Q7L4P6 421 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 OTOP3Q7RTS5 596 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 APTXQ7Z2E3 356 aaKnown RBP5.42□□□□□ -1.54
HDAC6-223ENST00000480525 CEP57Q86XR8 500 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 ELMOD1Q8N336 334 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 EHBP1Q8NDI1 1231 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 PDZD8Q8NEN9 1154 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 HASPINQ8TF76 798 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 SHC3Q92529 594 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 ERCC4Q92889 916 aaPredicted RBP5.42□□□□□ -1.54
HDAC6-223ENST00000480525 SMARCD1Q96GM5 515 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 FAM161BQ96MY7 647 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 SYT15Q9BQS2 421 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 LRRC3Q9BY71 257 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 IRX2Q9BZI1 471 aaPredicted RBP5.42□□□□□ -1.54
HDAC6-223ENST00000480525 HSD3B7Q9H2F3 369 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 SNX25Q9H3E2 840 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 FBXO44Q9H4M3 255 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 IGSF9Q9P2J2 1179 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 USP15Q9Y4E8 981 aaPredicted RBP5.42□□□□□ -1.54
HDAC6-223ENST00000480525 YIPF1Q9Y548 306 aa5.42□□□□□ -1.54
HDAC6-223ENST00000480525 TCF20Q9UGU0 1960 aaKnown RBP5.42□□□□□ -1.54
HDAC6-223ENST00000480525 ZNF318Q5VUA4 2279 aa5.41□□□□□ -1.54
HDAC6-223ENST00000480525 COL4A2P08572 1712 aa5.41□□□□□ -1.54
HDAC6-223ENST00000480525 A0A1B0GTH6 734 aa5.41□□□□□ -1.54
HDAC6-223ENST00000480525 CCDC195A0A1B0GUA6 201 aa5.41□□□□□ -1.54
HDAC6-223ENST00000480525 LGALS16A8MUM7 142 aa5.41□□□□□ -1.54
HDAC6-223ENST00000480525 A8MXQ7 604 aa5.41□□□□□ -1.54
HDAC6-223ENST00000480525 ANHXE9PGG2 379 aa5.41□□□□□ -1.54
HDAC6-223ENST00000480525 PRRG1O14668 218 aa5.41□□□□□ -1.54
HDAC6-223ENST00000480525 SART1O43290 800 aaKnown RBP5.41□□□□□ -1.54
HDAC6-223ENST00000480525 VNN2O95498 520 aa5.41□□□□□ -1.54
HDAC6-223ENST00000480525 OLFM2O95897 454 aa5.41□□□□□ -1.54
HDAC6-223ENST00000480525 LRG1P02750 347 aa5.41□□□□□ -1.54
HDAC6-223ENST00000480525 TRIM49P0CI25 452 aa5.41□□□□□ -1.54
HDAC6-223ENST00000480525 TRIM49CP0CI26 452 aa5.41□□□□□ -1.54
HDAC6-223ENST00000480525 SETSIPP0DME0 302 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms