RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 CCDC26Q8TAB7 109 aa14.34□□□□□ -0.11
ABCF1-206ENST00000479542 ZFYVE19Q96K21 471 aa14.34□□□□□ -0.11
ABCF1-206ENST00000479542 SEPT5Q99719 369 aaPredicted RBP14.34□□□□□ -0.11
ABCF1-206ENST00000479542 PYM1Q9BRP8 204 aaKnown RBP14.34□□□□□ -0.11
ABCF1-206ENST00000479542 TMEM206Q9H813 350 aa14.34□□□□□ -0.11
ABCF1-206ENST00000479542 HPS4Q9NQG7 708 aa14.34□□□□□ -0.11
ABCF1-206ENST00000479542 STK17AQ9UEE5 414 aa14.34□□□□□ -0.11
ABCF1-206ENST00000479542 TSC2P49815 1807 aa14.34□□□□□ -0.11
ABCF1-206ENST00000479542 KRT18P05783 430 aaKnown RBP14.33□□□□□ -0.12
ABCF1-206ENST00000479542 NMT1P30419 496 aaKnown RBP14.33□□□□□ -0.12
ABCF1-206ENST00000479542 ADSSP30520 456 aa14.33□□□□□ -0.12
ABCF1-206ENST00000479542 RPL10AP62906 217 aaKnown RBP14.33□□□□□ -0.12
ABCF1-206ENST00000479542 SHC2P98077 582 aa14.33□□□□□ -0.12
ABCF1-206ENST00000479542 CYP4F8P98187 520 aa14.33□□□□□ -0.12
ABCF1-206ENST00000479542 TSPY1Q01534 308 aa14.33□□□□□ -0.12
ABCF1-206ENST00000479542 BFSP1Q12934 665 aa14.33□□□□□ -0.12
ABCF1-206ENST00000479542 FSTL4Q6MZW2 842 aa14.33□□□□□ -0.12
ABCF1-206ENST00000479542 DPH6Q7L8W6 267 aa14.33□□□□□ -0.12
ABCF1-206ENST00000479542 LRRC52Q8N7C0 313 aa14.33□□□□□ -0.12
ABCF1-206ENST00000479542 CACTINQ8WUQ7 758 aaKnown RBP14.33□□□□□ -0.12
ABCF1-206ENST00000479542 MRPS31Q92665 395 aaKnown RBP14.33□□□□□ -0.12
ABCF1-206ENST00000479542 USP13Q92995 863 aaPredicted RBP14.33□□□□□ -0.12
ABCF1-206ENST00000479542 FUBP3Q96I24 572 aaKnown RBP eCLIP14.33□□□□□ -0.12
ABCF1-206ENST00000479542 UPF2Q9HAU5 1272 aaKnown RBP14.33□□□□□ -0.12
ABCF1-206ENST00000479542 C2orf42Q9NWW7 574 aa14.33□□□□□ -0.12
ABCF1-206ENST00000479542 GDAP2Q9NXN4 497 aa14.33□□□□□ -0.12
ABCF1-206ENST00000479542 EBF1Q9UH73 591 aa14.33□□□□□ -0.12
ABCF1-206ENST00000479542 EXOC7Q9UPT5 735 aa14.33□□□□□ -0.12
ABCF1-206ENST00000479542 MORC2Q9Y6X9 1032 aaPredicted RBP14.33□□□□□ -0.12
ABCF1-206ENST00000479542 ANK1P16157 1881 aa14.33□□□□□ -0.12
ABCF1-206ENST00000479542 GREB1Q4ZG55 1949 aa14.33□□□□□ -0.12
ABCF1-206ENST00000479542 SPAG17Q6Q759 2223 aa14.32□□□□□ -0.12
ABCF1-206ENST00000479542 EXTL3O43909 919 aa14.32□□□□□ -0.12
ABCF1-206ENST00000479542 RPP40O75818 363 aaKnown RBP14.32□□□□□ -0.12
ABCF1-206ENST00000479542 NOL4O94818 638 aa14.32□□□□□ -0.12
ABCF1-206ENST00000479542 GAP43P17677 238 aa14.32□□□□□ -0.12
ABCF1-206ENST00000479542 GARTP22102 1010 aa14.32□□□□□ -0.12
ABCF1-206ENST00000479542 FAM160A1Q05DH4 1040 aa14.32□□□□□ -0.12
ABCF1-206ENST00000479542 SRSF5Q13243 272 aaKnown RBP14.32□□□□□ -0.12
ABCF1-206ENST00000479542 ALCAMQ13740 583 aa14.32□□□□□ -0.12
ABCF1-206ENST00000479542 KARSQ15046 597 aaKnown RBP14.32□□□□□ -0.12
ABCF1-206ENST00000479542 CFAP221Q4G0U5 840 aa14.32□□□□□ -0.12
ABCF1-206ENST00000479542 HEATR6Q6AI08 1181 aaKnown RBP14.32□□□□□ -0.12
ABCF1-206ENST00000479542 SYT13Q7L8C5 426 aa14.32□□□□□ -0.12
ABCF1-206ENST00000479542 EFCAB13Q8IY85 973 aa14.32□□□□□ -0.12
ABCF1-206ENST00000479542 MAB21L3Q8N8X9 362 aa14.32□□□□□ -0.12
ABCF1-206ENST00000479542 POMGNT1Q8WZA1 660 aa14.32□□□□□ -0.12
ABCF1-206ENST00000479542 CHFRQ96EP1 664 aa14.32□□□□□ -0.12
ABCF1-206ENST00000479542 OLFML3Q9NRN5 406 aa14.32□□□□□ -0.12
ABCF1-206ENST00000479542 SLC8A2Q9UPR5 921 aa14.32□□□□□ -0.12
ABCF1-206ENST00000479542 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.32□□□□□ -0.12
ABCF1-206ENST00000479542 CNOT1A5YKK6 2376 aaKnown RBP14.32□□□□□ -0.12
ABCF1-206ENST00000479542 OTOL1A6NHN0 477 aaPredicted RBP14.31□□□□□ -0.12
ABCF1-206ENST00000479542 GABRDO14764 452 aa14.31□□□□□ -0.12
ABCF1-206ENST00000479542 KIAA0391O15091 583 aaKnown RBP14.31□□□□□ -0.12
ABCF1-206ENST00000479542 GDF9O60383 454 aa14.31□□□□□ -0.12
ABCF1-206ENST00000479542 HUS1O60921 280 aa14.31□□□□□ -0.12
ABCF1-206ENST00000479542 LHX1P48742 406 aa14.31□□□□□ -0.12
ABCF1-206ENST00000479542 ZC2HC1CQ53FD0 456 aaPredicted RBP14.31□□□□□ -0.12
ABCF1-206ENST00000479542 LARP1BQ659C4 914 aaKnown RBP14.31□□□□□ -0.12
ABCF1-206ENST00000479542 IL31Q6EBC2 164 aa14.31□□□□□ -0.12
ABCF1-206ENST00000479542 CC2D1AQ6P1N0 951 aaPredicted RBP14.31□□□□□ -0.12
ABCF1-206ENST00000479542 GPIHBP1Q8IV16 184 aa14.31□□□□□ -0.12
ABCF1-206ENST00000479542 BRSK2Q8IWQ3 736 aa14.31□□□□□ -0.12
ABCF1-206ENST00000479542 PDCL2Q8N4E4 241 aa14.31□□□□□ -0.12
ABCF1-206ENST00000479542 CXorf38Q8TB03 319 aa14.31□□□□□ -0.12
ABCF1-206ENST00000479542 GIPC2Q8TF65 315 aa14.31□□□□□ -0.12
ABCF1-206ENST00000479542 PKMYT1Q99640 499 aa14.31□□□□□ -0.12
ABCF1-206ENST00000479542 ABI2Q9NYB9 513 aaPredicted RBP14.31□□□□□ -0.12
ABCF1-206ENST00000479542 ITGA11Q9UKX5 1188 aa14.31□□□□□ -0.12
ABCF1-206ENST00000479542 PCDHB13Q9Y5F0 798 aa14.31□□□□□ -0.12
ABCF1-206ENST00000479542 PRPF40AO75400 957 aaKnown RBP14.3□□□□□ -0.12
ABCF1-206ENST00000479542 FAM163BP0C2L3 166 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 MAGEA11P43364 429 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 PDE6CP51160 858 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 GALK1P51570 392 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 MYL7Q01449 175 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 DHX8Q14562 1220 aaKnown RBP14.3□□□□□ -0.12
ABCF1-206ENST00000479542 SF3A1Q15459 793 aaKnown RBP14.3□□□□□ -0.12
ABCF1-206ENST00000479542 INTS6LQ5JSJ4 861 aaKnown RBP14.3□□□□□ -0.12
ABCF1-206ENST00000479542 L1TD1Q5T7N2 865 aaKnown RBP14.3□□□□□ -0.12
ABCF1-206ENST00000479542 FAM171BQ6P995 826 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 LIMS2Q7Z4I7 341 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 C11orf74Q86VG3 221 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 TOP6BLQ8N6T0 577 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 C12orf50Q8NA57 414 aaPredicted RBP14.3□□□□□ -0.12
ABCF1-206ENST00000479542 TTC8Q8TAM2 541 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 OSCP1Q8WVF1 389 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 DNAJC19Q96DA6 116 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 ACCSQ96QU6 501 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 P2RY13Q9BPV8 354 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 ARRDC1-AS1Q9H2J1 176 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 ZHX3Q9H4I2 956 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 EBF3Q9H4W6 596 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 VPS45Q9NRW7 570 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 TMLHEQ9NVH6 421 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 CCDC39Q9UFE4 941 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 SMC3Q9UQE7 1217 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 CCL26Q9Y258 94 aa14.3□□□□□ -0.12
ABCF1-206ENST00000479542 TISP43B9A030 160 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms