RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 SPPL2BQ8TCT7 592 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 CSGALNACT1Q8TDX6 532 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 ANKRD36BP1Q96IX9 119 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 SLC46A2Q9BY10 475 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 LMAN1LQ9HAT1 526 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 INTS13Q9NVM9 706 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 SERTAD1Q9UHV2 236 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 CCL26Q9Y258 94 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 ASB3Q9Y575 518 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 MYBPHLA2RUH7 354 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 HMGA1P17096 107 aaKnown RBP18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 LMO2P25791 158 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 PNPLA4P41247 253 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 KPNA1P52294 538 aaPredicted RBP18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 RBP5P82980 135 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 SOWAHAQ2M3V2 549 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 ARHGAP15Q53QZ3 475 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 INTS6LQ5JSJ4 861 aaKnown RBP18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 TXNDC8Q6A555 127 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 EPM2AIP1Q7L775 607 aaPredicted RBP18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 SCN4BQ8IWT1 228 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 SCFD1Q8WVM8 642 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 CLDN23Q96B33 292 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 CCDC127Q96BQ5 260 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 ITGA11Q9UKX5 1188 aa18.68■□□□□ 0.58
ECHDC1-216ENST00000479525 ZNF233A6NK53 670 aa18.67■□□□□ 0.58
ECHDC1-216ENST00000479525 PDGFRBP09619 1106 aa18.67■□□□□ 0.58
ECHDC1-216ENST00000479525 CASP4P49662 377 aa18.67■□□□□ 0.58
ECHDC1-216ENST00000479525 POU5F1Q01860 360 aaKnown RBP18.67■□□□□ 0.58
ECHDC1-216ENST00000479525 GAS6Q14393 721 aa18.67■□□□□ 0.58
ECHDC1-216ENST00000479525 TRIM68Q6AZZ1 485 aa18.67■□□□□ 0.58
ECHDC1-216ENST00000479525 Q6ZS52 159 aa18.67■□□□□ 0.58
ECHDC1-216ENST00000479525 KIAA2013Q8IYS2 634 aa18.67■□□□□ 0.58
ECHDC1-216ENST00000479525 HPDLQ96IR7 371 aa18.67■□□□□ 0.58
ECHDC1-216ENST00000479525 GCNAQ96QF7 691 aa18.67■□□□□ 0.58
ECHDC1-216ENST00000479525 PKMYT1Q99640 499 aa18.67■□□□□ 0.58
ECHDC1-216ENST00000479525 C7orf25Q9BPX7 421 aa18.67■□□□□ 0.58
ECHDC1-216ENST00000479525 OSBPL6Q9BZF3 934 aa18.67■□□□□ 0.58
ECHDC1-216ENST00000479525 GPR88Q9GZN0 384 aa18.67■□□□□ 0.58
ECHDC1-216ENST00000479525 TASP1Q9H6P5 420 aa18.67■□□□□ 0.58
ECHDC1-216ENST00000479525 AGPAT3Q9NRZ7 376 aa18.67■□□□□ 0.58
ECHDC1-216ENST00000479525 C2orf42Q9NWW7 574 aa18.67■□□□□ 0.58
ECHDC1-216ENST00000479525 NME7Q9Y5B8 376 aa18.67■□□□□ 0.58
ECHDC1-216ENST00000479525 MYH10P35580 1976 aa18.66■□□□□ 0.58
ECHDC1-216ENST00000479525 MYO16Q9Y6X6 1858 aa18.66■□□□□ 0.58
ECHDC1-216ENST00000479525 SPTBN4Q9H254 2564 aa18.66■□□□□ 0.58
ECHDC1-216ENST00000479525 TADA3O75528 432 aa18.66■□□□□ 0.58
ECHDC1-216ENST00000479525 CST3P01034 146 aaPredicted RBP18.66■□□□□ 0.58
ECHDC1-216ENST00000479525 TNNC2P02585 160 aa18.66■□□□□ 0.58
ECHDC1-216ENST00000479525 F11P03951 625 aa18.66■□□□□ 0.58
ECHDC1-216ENST00000479525 PAX3P23760 479 aa18.66■□□□□ 0.58
ECHDC1-216ENST00000479525 NLRP12P59046 1061 aa18.66■□□□□ 0.58
ECHDC1-216ENST00000479525 MYL7Q01449 175 aa18.66■□□□□ 0.58
ECHDC1-216ENST00000479525 PON2Q15165 354 aa18.66■□□□□ 0.58
ECHDC1-216ENST00000479525 LPAL2Q16609 132 aa18.66■□□□□ 0.58
ECHDC1-216ENST00000479525 RESP18Q5W5W9 173 aa18.66■□□□□ 0.58
ECHDC1-216ENST00000479525 STXBP4Q6ZWJ1 553 aa18.66■□□□□ 0.58
ECHDC1-216ENST00000479525 UNC13DQ70J99 1090 aa18.66■□□□□ 0.58
ECHDC1-216ENST00000479525 LRRC52Q8N7C0 313 aa18.66■□□□□ 0.58
ECHDC1-216ENST00000479525 ZNF507Q8TCN5 953 aa18.66■□□□□ 0.58
ECHDC1-216ENST00000479525 KBTBD7Q8WVZ9 684 aa18.66■□□□□ 0.58
ECHDC1-216ENST00000479525 CUEDC2Q9H467 287 aa18.66■□□□□ 0.58
ECHDC1-216ENST00000479525 MRPS17Q9Y2R5 130 aaKnown RBP18.66■□□□□ 0.58
ECHDC1-216ENST00000479525 CHADO15335 359 aa18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 EIF3DO15371 548 aaKnown RBP eCLIP18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 NCAM2O15394 837 aa18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 TNNI1P19237 187 aa18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 CDC25CP30307 473 aa18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 AMPD3Q01432 767 aa18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 SATB1Q01826 763 aa18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 EHHADHQ08426 723 aa18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 DMWDQ09019 674 aa18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 FCHO2Q0JRZ9 810 aa18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 SNRNP35Q16560 246 aaKnown RBP18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 SPATA2LQ8IUW3 424 aaPredicted RBP18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 PLEKHO2Q8TD55 490 aa18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 BPIFB1Q8TDL5 484 aa18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 C2orf15Q8WU43 125 aaKnown RBP18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 MMS19Q96T76 1030 aa18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 SYT15Q9BQS2 421 aa18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 MRPL45Q9BRJ2 306 aaKnown RBP18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 LRRC27Q9C0I9 530 aa18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 TRPC7Q9HCX4 862 aa18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 CRTAC1Q9NQ79 661 aa18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 GDAP2Q9NXN4 497 aa18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 FAM13BQ9NYF5 915 aa18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 HSFX1Q9UBD0 423 aa18.65■□□□□ 0.58
ECHDC1-216ENST00000479525 A0A1B0GVL5 298 aa18.64■□□□□ 0.57
ECHDC1-216ENST00000479525 SPECC1L-ADORA2AF8WAN1 911 aa18.64■□□□□ 0.57
ECHDC1-216ENST00000479525 MAN2B1O00754 1011 aa18.64■□□□□ 0.57
ECHDC1-216ENST00000479525 KINO60870 393 aaKnown RBP18.64■□□□□ 0.57
ECHDC1-216ENST00000479525 CHRNB1P11230 501 aa18.64■□□□□ 0.57
ECHDC1-216ENST00000479525 RPS9P46781 194 aaKnown RBP18.64■□□□□ 0.57
ECHDC1-216ENST00000479525 CYP24A1Q07973 514 aa18.64■□□□□ 0.57
ECHDC1-216ENST00000479525 NAIF1Q69YI7 327 aaPredicted RBP18.64■□□□□ 0.57
ECHDC1-216ENST00000479525 ZC3H14Q6PJT7 736 aaKnown RBP18.64■□□□□ 0.57
ECHDC1-216ENST00000479525 TRAPPC11Q7Z392 1133 aa18.64■□□□□ 0.57
ECHDC1-216ENST00000479525 CMTM8Q8IZV2 173 aa18.64■□□□□ 0.57
ECHDC1-216ENST00000479525 ZNF516Q92618 1163 aa18.64■□□□□ 0.57
ECHDC1-216ENST00000479525 MYLPFQ96A32 169 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms