RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 PRR23CQ6ZRP0 262 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 USP49Q70CQ1 688 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 SV2BQ7L1I2 683 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 BRSK2Q8IWQ3 736 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 TTC16Q8NEE8 873 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 CACTINQ8WUQ7 758 aaKnown RBP14.26□□□□□ -0.13
VCL-205ENST00000478896 EBF3Q9H4W6 596 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 KIF9Q9HAQ2 790 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 GKN1Q9NS71 199 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 RBAKQ9NYW8 714 aaPredicted RBP14.26□□□□□ -0.13
VCL-205ENST00000478896 AGAP1Q9UPQ3 857 aa14.26□□□□□ -0.13
VCL-205ENST00000478896 PPP1R37O75864 691 aa14.25□□□□□ -0.13
VCL-205ENST00000478896 CENPBP07199 599 aaPredicted RBP14.25□□□□□ -0.13
VCL-205ENST00000478896 TMEM191BP0C7N4 346 aa14.25□□□□□ -0.13
VCL-205ENST00000478896 PDCP20941 246 aa14.25□□□□□ -0.13
VCL-205ENST00000478896 ACAT1P24752 427 aaKnown RBP14.25□□□□□ -0.13
VCL-205ENST00000478896 STAT6P42226 847 aa14.25□□□□□ -0.13
VCL-205ENST00000478896 AMPD2Q01433 879 aa14.25□□□□□ -0.13
VCL-205ENST00000478896 CEBPZQ03701 1054 aaKnown RBP14.25□□□□□ -0.13
VCL-205ENST00000478896 KCNA1Q09470 495 aa14.25□□□□□ -0.13
VCL-205ENST00000478896 RUNX3Q13761 415 aa14.25□□□□□ -0.13
VCL-205ENST00000478896 SDHAF4Q5VUM1 108 aa14.25□□□□□ -0.13
VCL-205ENST00000478896 TXNDC8Q6A555 127 aa14.25□□□□□ -0.13
VCL-205ENST00000478896 TRIM68Q6AZZ1 485 aa14.25□□□□□ -0.13
VCL-205ENST00000478896 PDCL2Q8N4E4 241 aa14.25□□□□□ -0.13
VCL-205ENST00000478896 USP13Q92995 863 aaPredicted RBP14.25□□□□□ -0.13
VCL-205ENST00000478896 TDP1Q9NUW8 608 aa14.25□□□□□ -0.13
VCL-205ENST00000478896 TMLHEQ9NVH6 421 aa14.25□□□□□ -0.13
VCL-205ENST00000478896 C2orf42Q9NWW7 574 aa14.25□□□□□ -0.13
VCL-205ENST00000478896 DDX43Q9NXZ2 648 aaKnown RBP14.25□□□□□ -0.13
VCL-205ENST00000478896 UXTQ9UBK9 157 aaPredicted RBP14.25□□□□□ -0.13
VCL-205ENST00000478896 CCL26Q9Y258 94 aa14.25□□□□□ -0.13
VCL-205ENST00000478896 R3HCC1Q9Y3T6 440 aaKnown RBP14.25□□□□□ -0.13
VCL-205ENST00000478896 DMXL1Q9Y485 3027 aa14.25□□□□□ -0.13
VCL-205ENST00000478896 GOLGA8IPA6NC78 632 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 MYMKA6NI61 221 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 GOLGA8JA6NMD2 632 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 F11P03951 625 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 HMGA1P17096 107 aaKnown RBP14.24□□□□□ -0.13
VCL-205ENST00000478896 KCNA4P22459 653 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 WNT7BP56706 349 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 RPL10AP62906 217 aaKnown RBP14.24□□□□□ -0.13
VCL-205ENST00000478896 ALCAMQ13740 583 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 CSRP2Q16527 193 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 INTS6LQ5JSJ4 861 aaKnown RBP14.24□□□□□ -0.13
VCL-205ENST00000478896 CCDC73Q6ZRK6 1079 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 TMEM150AQ86TG1 271 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 WDR5BQ86VZ2 330 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 TMEM86AQ8N2M4 240 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 FAM160A2Q8N612 972 aaPredicted RBP14.24□□□□□ -0.13
VCL-205ENST00000478896 CSGALNACT2Q8N6G5 542 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 C1orf127Q8N9H9 656 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 LEO1Q8WVC0 666 aaPredicted RBP14.24□□□□□ -0.13
VCL-205ENST00000478896 CLIC6Q96NY7 704 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 ACBD6Q9BR61 282 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 TRPC7Q9HCX4 862 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 HPS4Q9NQG7 708 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 FBXO2Q9UK22 296 aaPredicted RBP14.24□□□□□ -0.13
VCL-205ENST00000478896 ITGA11Q9UKX5 1188 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 L1RE1Q9UN81 338 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 SLC8A2Q9UPR5 921 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 PCDHB13Q9Y5F0 798 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 SRPRBQ9Y5M8 271 aaKnown RBP14.24□□□□□ -0.13
VCL-205ENST00000478896 SNX9Q9Y5X1 595 aa14.24□□□□□ -0.13
VCL-205ENST00000478896 GREB1Q4ZG55 1949 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 CEP250Q9BV73 2442 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 ATG2BQ96BY7 2078 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 EXTL3O43909 919 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 ATG13O75143 517 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 CCDC192P0DO97 292 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 GARTP22102 1010 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 CYP2F1P24903 491 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 CASP5P51878 434 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 DDR2Q16832 855 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 TMEM196Q5HYL7 178 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 PKN3Q6P5Z2 889 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 SPATA2LQ8IUW3 424 aaPredicted RBP14.23□□□□□ -0.13
VCL-205ENST00000478896 ADGRF2Q8IZF7 708 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 LRRC52Q8N7C0 313 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 ZSWIM2Q8NEG5 633 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 EXOC4Q96A65 974 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 DNAJC19Q96DA6 116 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 ANKRD36BP1Q96IX9 119 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 CNTNAP3BQ96NU0 1288 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 FAM83CQ9BQN1 747 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 CBWD1Q9BRT8 395 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 STRA6Q9BX79 667 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 CNTNAP3Q9BZ76 1288 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 MTMR12Q9C0I1 747 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 PCIF1Q9H4Z3 704 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 OLFML3Q9NRN5 406 aa14.23□□□□□ -0.13
VCL-205ENST00000478896 SLC30A4O14863 429 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 FOXD2O60548 495 aaPredicted RBP14.22□□□□□ -0.13
VCL-205ENST00000478896 RNF40O75150 1001 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 RPP40O75818 363 aaKnown RBP14.22□□□□□ -0.13
VCL-205ENST00000478896 CKMP06732 381 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 ARSAP15289 507 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 PCSK1P29120 753 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 HOXA6P31267 233 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 HOXC13P31276 330 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms