RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 E5RI56 91 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 DPYSL4O14531 572 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 ATP9AO75110 1047 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 SEC24CP53992 1094 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 ERVK-9P63128 1117 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 FSCBQ5H9T9 825 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 HSD17B14Q9BPX1 270 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 EPN3Q9H201 632 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 PIDD1Q9HB75 910 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 SUN2Q9UH99 717 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 GGT7Q9UJ14 662 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 FAM47DPA6NHR8 397 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 F8W8V4 182 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 EIF3HO15372 352 aaKnown RBP eCLIP14.86□□□□□ -0.03
NPHP4-208ENST00000478423 ATP5HO75947 161 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 LSP1P33241 339 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 PPP3CAQ08209 521 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 GRIK4Q16099 956 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 HABP4Q5JVS0 413 aaKnown RBP14.86□□□□□ -0.03
NPHP4-208ENST00000478423 ASAP3Q8TDY4 903 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 FGD4Q96M96 766 aa14.86□□□□□ -0.03
NPHP4-208ENST00000478423 CYB561D2O14569 222 aa14.85□□□□□ -0.03
NPHP4-208ENST00000478423 NVLO15381 856 aaKnown RBP14.85□□□□□ -0.03
NPHP4-208ENST00000478423 ZNF189O75820 626 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-208ENST00000478423 IRAK1P51617 712 aa14.85□□□□□ -0.03
NPHP4-208ENST00000478423 RAD51Q06609 339 aa14.85□□□□□ -0.03
NPHP4-208ENST00000478423 CLEC16AQ2KHT3 1053 aa14.85□□□□□ -0.03
NPHP4-208ENST00000478423 TFDP3Q5H9I0 405 aa14.85□□□□□ -0.03
NPHP4-208ENST00000478423 AGBL2Q5U5Z8 902 aa14.85□□□□□ -0.03
NPHP4-208ENST00000478423 TMEM176AQ96HP8 235 aa14.85□□□□□ -0.03
NPHP4-208ENST00000478423 SGSM3Q96HU1 749 aa14.85□□□□□ -0.03
NPHP4-208ENST00000478423 XPO6Q96QU8 1125 aaKnown RBP14.85□□□□□ -0.03
NPHP4-208ENST00000478423 ROPN1BQ9BZX4 212 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-208ENST00000478423 ROPN1Q9HAT0 212 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-208ENST00000478423 CYP3A43Q9HB55 503 aa14.85□□□□□ -0.03
NPHP4-208ENST00000478423 UBIAD1Q9Y5Z9 338 aa14.85□□□□□ -0.03
NPHP4-208ENST00000478423 GPR182O15218 404 aa14.85□□□□□ -0.03
NPHP4-208ENST00000478423 DGKZQ13574 1117 aa14.85□□□□□ -0.03
NPHP4-208ENST00000478423 ETNPPLQ8TBG4 499 aa14.85□□□□□ -0.03
NPHP4-208ENST00000478423 KAT5Q92993 513 aa14.85□□□□□ -0.03
NPHP4-208ENST00000478423 MTHFD1LQ6UB35 978 aa14.85□□□□□ -0.03
NPHP4-208ENST00000478423 SPATA21Q7Z572 469 aa14.85□□□□□ -0.03
NPHP4-208ENST00000478423 BRSK2Q8IWQ3 736 aa14.85□□□□□ -0.03
NPHP4-208ENST00000478423 PPIL6Q8IXY8 311 aa14.85□□□□□ -0.03
NPHP4-208ENST00000478423 SMAPO00193 183 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 GLI1P08151 1106 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 CTCFP49711 727 aaPredicted RBP14.84□□□□□ -0.03
NPHP4-208ENST00000478423 FBXO47Q5MNV8 452 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 FAM131BQ86XD5 332 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 L3MBTL3Q96JM7 780 aaPredicted RBP14.84□□□□□ -0.03
NPHP4-208ENST00000478423 SLITRK1Q96PX8 696 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 CNPY3Q9BT09 278 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 VTA1Q9NP79 307 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 GPATCH2LQ9NWQ4 482 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 SNTG2Q9NY99 539 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 PRRG1O14668 218 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 EPHB6O15197 1021 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 LSM8O95777 96 aaKnown RBP14.84□□□□□ -0.03
NPHP4-208ENST00000478423 PTK7Q13308 1070 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 MAPRE1Q15691 268 aaKnown RBP14.84□□□□□ -0.03
NPHP4-208ENST00000478423 MCOLN2Q8IZK6 566 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 SPDYE1Q8NFV5 336 aaPredicted RBP14.84□□□□□ -0.03
NPHP4-208ENST00000478423 DNAJB3Q8WWF6 145 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 FHDC1Q9C0D6 1143 aaPredicted RBP14.84□□□□□ -0.03
NPHP4-208ENST00000478423 SMYD3Q9H7B4 428 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 ZC3H4Q9UPT8 1303 aaKnown RBP14.84□□□□□ -0.03
NPHP4-208ENST00000478423 THP07101 528 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 SPATA31C1P0DKV0 1188 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 SNHG28P0DPA3 235 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 ADCYAP1R1P41586 468 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 OTUD4Q01804 1114 aaKnown RBP14.84□□□□□ -0.03
NPHP4-208ENST00000478423 ANO4Q32M45 955 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 TAS2R42Q7RTR8 314 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 FAM172AQ8WUF8 416 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 RXFP2Q8WXD0 754 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 SPDL1Q96EA4 605 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 TRPC7Q9HCX4 862 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 PEAK1Q9H792 1746 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 LRRIQ3A6PVS8 624 aaPredicted RBP14.84□□□□□ -0.03
NPHP4-208ENST00000478423 SPAG6O75602 509 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 ODC1P11926 461 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 BCAT1P54687 386 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 CDH8P55286 799 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 PCSK7Q16549 785 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 RIOX2Q8IUF8 465 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 C4orf32Q8N8J7 132 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 ULK4Q96C45 1275 aa14.84□□□□□ -0.03
NPHP4-208ENST00000478423 BCL9LQ86UU0 1499 aa14.83□□□□□ -0.03
NPHP4-208ENST00000478423 PPP1R11O60927 126 aaPredicted RBP14.83□□□□□ -0.03
NPHP4-208ENST00000478423 PLA2G4AP47712 749 aa14.83□□□□□ -0.03
NPHP4-208ENST00000478423 RASIP1Q5U651 963 aa14.83□□□□□ -0.03
NPHP4-208ENST00000478423 CHSY1Q86X52 802 aa14.83□□□□□ -0.03
NPHP4-208ENST00000478423 ADGRF2Q8IZF7 708 aa14.83□□□□□ -0.03
NPHP4-208ENST00000478423 LRRN4CLQ8ND94 238 aa14.83□□□□□ -0.03
NPHP4-208ENST00000478423 PDZD8Q8NEN9 1154 aa14.83□□□□□ -0.03
NPHP4-208ENST00000478423 IPMKQ8NFU5 416 aa14.83□□□□□ -0.03
NPHP4-208ENST00000478423 TRPM4Q8TD43 1214 aa14.83□□□□□ -0.03
NPHP4-208ENST00000478423 ASB7Q9H672 318 aa14.83□□□□□ -0.03
NPHP4-208ENST00000478423 TSR3Q9UJK0 312 aaKnown RBP14.83□□□□□ -0.03
NPHP4-208ENST00000478423 CACNA1FO60840 1977 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms