RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 UBE4BO95155 1302 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 GALR2O43603 387 aaPredicted RBP10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 ECI2O75521 394 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 MICAL2O94851 1124 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 RHOBTB3O94955 611 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 TNNI1P19237 187 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 GABRR2P28476 465 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 PNPLA4P41247 253 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 EPHB3P54753 998 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 CDH8P55286 799 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 CLDN10P78369 228 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 PNOCQ13519 176 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 SLC44A4Q53GD3 710 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 INTS6LQ5JSJ4 861 aaKnown RBP10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 FAM171BQ6P995 826 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 STXBP4Q6ZWJ1 553 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 ARID3BQ8IVW6 561 aaPredicted RBP10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 ZNF687Q8N1G0 1237 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 SMARCD2Q92925 531 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 ELSPBP1Q96BH3 223 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 ZFYVE19Q96K21 471 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 ZNF560Q96MR9 790 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 CGRRF1Q99675 332 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 ACBD6Q9BR61 282 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 DDX23Q9BUQ8 820 aaKnown RBP10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 SLC46A2Q9BY10 475 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 OXCT2Q9BYC2 517 aaPredicted RBP10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 SDCBP2Q9H190 292 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 EXOC1Q9NV70 894 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 CCL26Q9Y258 94 aa10.98□□□□□ -0.65
LCLAT1-209ENST00000478015 SDK1Q7Z5N4 2213 aa10.97□□□□□ -0.65
LCLAT1-209ENST00000478015 KIAA0391O15091 583 aaKnown RBP10.97□□□□□ -0.65
LCLAT1-209ENST00000478015 EXOC3O60645 756 aa10.97□□□□□ -0.65
LCLAT1-209ENST00000478015 HUS1O60921 280 aa10.97□□□□□ -0.65
LCLAT1-209ENST00000478015 AKAP3O75969 853 aa10.97□□□□□ -0.65
LCLAT1-209ENST00000478015 C4BPAP04003 597 aaKnown RBP10.97□□□□□ -0.65
LCLAT1-209ENST00000478015 NR3C1P04150 777 aa10.97□□□□□ -0.65
LCLAT1-209ENST00000478015 HOXC13P31276 330 aa10.97□□□□□ -0.65
LCLAT1-209ENST00000478015 ALDH1A3P47895 512 aa10.97□□□□□ -0.65
LCLAT1-209ENST00000478015 STARD6P59095 220 aa10.97□□□□□ -0.65
LCLAT1-209ENST00000478015 MTSS1LQ765P7 747 aa10.97□□□□□ -0.65
LCLAT1-209ENST00000478015 METTL23Q86XA0 190 aa10.97□□□□□ -0.65
LCLAT1-209ENST00000478015 MAML2Q8IZL2 1156 aaPredicted RBP10.97□□□□□ -0.65
LCLAT1-209ENST00000478015 TOP6BLQ8N6T0 577 aa10.97□□□□□ -0.65
LCLAT1-209ENST00000478015 ANKRD36BP1Q96IX9 119 aa10.97□□□□□ -0.65
LCLAT1-209ENST00000478015 SLC22A12Q96S37 553 aa10.97□□□□□ -0.65
LCLAT1-209ENST00000478015 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.97□□□□□ -0.651e-6■■■■■ 179.3
LCLAT1-209ENST00000478015 HSFX1Q9UBD0 423 aa10.97□□□□□ -0.65
LCLAT1-209ENST00000478015 NUP210Q8TEM1 1887 aaPredicted RBP10.97□□□□□ -0.65
LCLAT1-209ENST00000478015 CEP250Q9BV73 2442 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 OTOL1A6NHN0 477 aaPredicted RBP10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 ZNF197O14709 1029 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 F11P03951 625 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 PAX3P23760 479 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 RAP1GAPP47736 663 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 MRE11P49959 708 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 PMS1P54277 932 aaKnown RBP10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 USP46P62068 366 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 PLD1Q13393 1074 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 WDR72Q3MJ13 1102 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 ZCWPW2Q504Y3 356 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 HS2ST1Q7LGA3 356 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 SLC9A9Q8IVB4 645 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 CCDC105Q8IYK2 499 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 THEM5Q8N1Q8 247 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 PJA1Q8NG27 643 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 TMEM174Q8WUU8 243 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 CHFRQ96EP1 664 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 KCNH6Q9H252 994 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 ATXN3LQ9H3M9 355 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 SMYD3Q9H7B4 428 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 TRPV4Q9HBA0 871 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 KIAA1586Q9HCI6 787 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 ZFP14Q9HCL3 533 aa10.96□□□□□ -0.65
LCLAT1-209ENST00000478015 HEPACAM2A8MVW5 462 aa10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 STK25O00506 426 aa10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 PDXKO00764 312 aa10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 GADD45BO75293 160 aaPredicted RBP10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 PRPF40AO75400 957 aaKnown RBP10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 TNNC2P02585 160 aa10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 TARSP26639 723 aaKnown RBP10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 SOX9P48436 509 aa10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 TUFMP49411 452 aaKnown RBP10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 ZXDBP98169 803 aa10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 TNK2Q07912 1038 aa10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 MLF2Q15773 248 aaPredicted RBP10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 TXNDC8Q6A555 127 aa10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 SPOPLQ6IQ16 392 aa10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 ELMOD1Q8N336 334 aa10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 DTWD2Q8NBA8 298 aa10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 TTC8Q8TAM2 541 aa10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 SPPL2BQ8TCT7 592 aa10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 PCED1BQ96HM7 432 aa10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 CYP2S1Q96SQ9 504 aa10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 MMS19Q96T76 1030 aa10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 SLITRK6Q9H5Y7 841 aa10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 NXF1Q9UBU9 619 aaKnown RBP10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 HMGXB4Q9UGU5 601 aa10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 USP25Q9UHP3 1055 aa10.95□□□□□ -0.66
LCLAT1-209ENST00000478015 TRAF3IP3Q9Y228 551 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms