RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 AFAP1L2Q8N4X5 818 aa4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 UBR7Q8N806 425 aa4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 PPM1NQ8N819 430 aa4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 C16orf52Q8NHV5 167 aa4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 COQ8BQ96D53 544 aa4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 BRD9Q9H8M2 597 aa4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 GPR35Q9HC97 309 aa4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 SERHLQ9NQF3 203 aa4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 MAN1C1Q9NR34 630 aa4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 PDGFCQ9NRA1 345 aa4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 DUSP22Q9NRW4 184 aa4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 GNL3LQ9NVN8 582 aaKnown RBP4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 TRIM75PA6NK02 468 aa4.45□□□□□ -1.7
NCKAP1-204ENST00000477988 H7C1Q1 480 aa4.45□□□□□ -1.7
NCKAP1-204ENST00000477988 RPLP2P05387 115 aaKnown RBP4.45□□□□□ -1.7
NCKAP1-204ENST00000477988 GNAI3P08754 354 aa4.45□□□□□ -1.7
NCKAP1-204ENST00000477988 SLC16A1P53985 500 aa4.45□□□□□ -1.7
NCKAP1-204ENST00000477988 GYS2P54840 703 aa4.45□□□□□ -1.7
NCKAP1-204ENST00000477988 ERVK-21P61565 698 aa4.45□□□□□ -1.7
NCKAP1-204ENST00000477988 GNAI1P63096 354 aa4.45□□□□□ -1.7
NCKAP1-204ENST00000477988 TRIM72Q6ZMU5 477 aa4.45□□□□□ -1.7
NCKAP1-204ENST00000477988 JAZF1Q86VZ6 243 aa4.45□□□□□ -1.7
NCKAP1-204ENST00000477988 KRT78Q8N1N4 520 aa4.45□□□□□ -1.7
NCKAP1-204ENST00000477988 NRACQ8N912 160 aa4.45□□□□□ -1.7
NCKAP1-204ENST00000477988 CLPTM1LQ96KA5 538 aa4.45□□□□□ -1.7
NCKAP1-204ENST00000477988 CFAP97Q9P2B7 532 aa4.45□□□□□ -1.7
NCKAP1-204ENST00000477988 RAD54BQ9Y620 910 aa4.45□□□□□ -1.7
NCKAP1-204ENST00000477988 POC1B-GALNT4F8VUJ3 575 aa4.44□□□□□ -1.7
NCKAP1-204ENST00000477988 PPM1DO15297 605 aa4.44□□□□□ -1.7
NCKAP1-204ENST00000477988 SCP2P22307 547 aa4.44□□□□□ -1.7
NCKAP1-204ENST00000477988 CYP4F2P78329 520 aa4.44□□□□□ -1.7
NCKAP1-204ENST00000477988 VPS53Q5VIR6 699 aa4.44□□□□□ -1.7
NCKAP1-204ENST00000477988 GALNT4Q8N4A0 578 aa4.44□□□□□ -1.7
NCKAP1-204ENST00000477988 RP9Q8TA86 221 aaKnown RBP4.44□□□□□ -1.7
NCKAP1-204ENST00000477988 RITA1Q96K30 269 aa4.44□□□□□ -1.7
NCKAP1-204ENST00000477988 ZC3H10Q96K80 434 aaKnown RBP4.44□□□□□ -1.7
NCKAP1-204ENST00000477988 DMRTA2Q96SC8 542 aa4.44□□□□□ -1.7
NCKAP1-204ENST00000477988 FAM118BQ9BPY3 351 aa4.44□□□□□ -1.7
NCKAP1-204ENST00000477988 FSD1LQ9BXM9 530 aa4.44□□□□□ -1.7
NCKAP1-204ENST00000477988 ZNF785A8K8V0 405 aa4.43□□□□□ -1.7
NCKAP1-204ENST00000477988 EYA4O95677 639 aa4.43□□□□□ -1.7
NCKAP1-204ENST00000477988 GJB1P08034 283 aa4.43□□□□□ -1.7
NCKAP1-204ENST00000477988 IL6RP08887 468 aaPredicted RBP4.43□□□□□ -1.7
NCKAP1-204ENST00000477988 CHRM5P08912 532 aaPredicted RBP4.43□□□□□ -1.7
NCKAP1-204ENST00000477988 NPSP0C0P6 89 aa4.43□□□□□ -1.7
NCKAP1-204ENST00000477988 ATP5F1P24539 256 aaPredicted RBP4.43□□□□□ -1.7
NCKAP1-204ENST00000477988 THBS3P49746 956 aa4.43□□□□□ -1.7
NCKAP1-204ENST00000477988 CERKLQ49MI3 558 aaPredicted RBP4.43□□□□□ -1.7
NCKAP1-204ENST00000477988 ICE2Q659A1 982 aa4.43□□□□□ -1.7
NCKAP1-204ENST00000477988 NAPRTQ6XQN6 538 aa4.43□□□□□ -1.7
NCKAP1-204ENST00000477988 PARS2Q7L3T8 475 aaKnown RBP4.43□□□□□ -1.7
NCKAP1-204ENST00000477988 SPATS2Q86XZ4 545 aaKnown RBP4.43□□□□□ -1.7
NCKAP1-204ENST00000477988 CYP2W1Q8TAV3 490 aa4.43□□□□□ -1.7
NCKAP1-204ENST00000477988 DAZAP1Q96EP5 407 aaKnown RBP4.43□□□□□ -1.7
NCKAP1-204ENST00000477988 LYZL4Q96KX0 146 aa4.43□□□□□ -1.7
NCKAP1-204ENST00000477988 PUS7Q96PZ0 661 aaKnown RBP4.43□□□□□ -1.7
NCKAP1-204ENST00000477988 ADAMTS5Q9UNA0 930 aa4.43□□□□□ -1.7
NCKAP1-204ENST00000477988 IPPQ9Y573 584 aa4.43□□□□□ -1.7
NCKAP1-204ENST00000477988 LY6G6EA0A0G2JKS1 128 aa4.42□□□□□ -1.7
NCKAP1-204ENST00000477988 F2RL2O00254 374 aa4.42□□□□□ -1.7
NCKAP1-204ENST00000477988 GPR39O43194 453 aa4.42□□□□□ -1.7
NCKAP1-204ENST00000477988 NDUFS2O75306 463 aa4.42□□□□□ -1.7
NCKAP1-204ENST00000477988 USP1O94782 785 aa4.42□□□□□ -1.7
NCKAP1-204ENST00000477988 PDHA1P08559 390 aa4.42□□□□□ -1.7
NCKAP1-204ENST00000477988 IL1R2P27930 398 aa4.42□□□□□ -1.7
NCKAP1-204ENST00000477988 LIPAP38571 399 aa4.42□□□□□ -1.7
NCKAP1-204ENST00000477988 GCLCP48506 637 aaPredicted RBP4.42□□□□□ -1.7
NCKAP1-204ENST00000477988 ZNF135P52742 658 aaPredicted RBP4.42□□□□□ -1.7
NCKAP1-204ENST00000477988 PSMC1P62191 440 aaKnown RBP4.42□□□□□ -1.7
NCKAP1-204ENST00000477988 TBC1D25Q3MII6 688 aa4.42□□□□□ -1.7
NCKAP1-204ENST00000477988 TREML2Q5T2D2 321 aa4.42□□□□□ -1.7
NCKAP1-204ENST00000477988 ATG9BQ674R7 924 aa4.42□□□□□ -1.7
NCKAP1-204ENST00000477988 SHC4Q6S5L8 630 aa4.42□□□□□ -1.7
NCKAP1-204ENST00000477988 MAVSQ7Z434 540 aa4.42□□□□□ -1.7
NCKAP1-204ENST00000477988 CHAC2Q8WUX2 184 aa4.42□□□□□ -1.7
NCKAP1-204ENST00000477988 TINAGL1Q9GZM7 467 aaPredicted RBP4.42□□□□□ -1.7
NCKAP1-204ENST00000477988 FAM90A8PA6NJQ4 464 aa4.41□□□□□ -1.7
NCKAP1-204ENST00000477988 FCHO1O14526 889 aa4.41□□□□□ -1.7
NCKAP1-204ENST00000477988 HTRA2O43464 458 aaPredicted RBP4.41□□□□□ -1.7
NCKAP1-204ENST00000477988 TJP3O95049 919 aa4.41□□□□□ -1.7
NCKAP1-204ENST00000477988 FAM90A13PP0C7W8 464 aa4.41□□□□□ -1.7
NCKAP1-204ENST00000477988 FAM90A24PP0C7X0 464 aa4.41□□□□□ -1.7
NCKAP1-204ENST00000477988 ENGP17813 658 aa4.41□□□□□ -1.7
NCKAP1-204ENST00000477988 MALP21145 153 aa4.41□□□□□ -1.7
NCKAP1-204ENST00000477988 TOB1P50616 345 aaPredicted RBP4.41□□□□□ -1.7
NCKAP1-204ENST00000477988 HYAL1Q12794 435 aa4.41□□□□□ -1.7
NCKAP1-204ENST00000477988 KLF1Q13351 362 aaPredicted RBP4.41□□□□□ -1.7
NCKAP1-204ENST00000477988 MTHFD1LQ6UB35 978 aa4.41□□□□□ -1.7
NCKAP1-204ENST00000477988 PPP1R32Q7Z5V6 425 aa4.41□□□□□ -1.7
NCKAP1-204ENST00000477988 RBMXL3Q8N7X1 1067 aaKnown RBP4.41□□□□□ -1.7
NCKAP1-204ENST00000477988 DDX17Q92841 729 aaKnown RBP4.41□□□□□ -1.7
NCKAP1-204ENST00000477988 TUBD1Q9UJT1 453 aa4.41□□□□□ -1.7
NCKAP1-204ENST00000477988 SCAF8Q9UPN6 1271 aaKnown RBP4.41□□□□□ -1.7
NCKAP1-204ENST00000477988 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 NT5C1B-RDH14C9J2C7 533 aa4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 UBE2Q2LH0YL09 131 aa4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 KRT86O43790 486 aa4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 RARBP10826 455 aa4.4□□□□□ -1.71
NCKAP1-204ENST00000477988 CYP2A6P11509 494 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms