RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 EXTL3O43909 919 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 GCNT3O95395 438 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 F11P03951 625 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 ITGB3P05106 788 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 CSH1P0DML2 217 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 CSH2P0DML3 217 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 HMGA1P17096 107 aaKnown RBP12.65□□□□□ -0.38
CPSF7-211ENST00000477890 DDX6P26196 483 aaKnown RBP eCLIP12.65□□□□□ -0.38
CPSF7-211ENST00000477890 POLR2BP30876 1174 aaKnown RBP12.65□□□□□ -0.38
CPSF7-211ENST00000477890 WNT7BP56706 349 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 GRSF1Q12849 480 aaKnown RBP eCLIP12.65□□□□□ -0.38
CPSF7-211ENST00000477890 RUNX3Q13761 415 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 NFE2Q16621 373 aaPredicted RBP12.65□□□□□ -0.38
CPSF7-211ENST00000477890 L1TD1Q5T7N2 865 aaKnown RBP12.65□□□□□ -0.38
CPSF7-211ENST00000477890 SDHAF4Q5VUM1 108 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 RRAGBQ5VZM2 374 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 TXNDC8Q6A555 127 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 PKN3Q6P5Z2 889 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 WDR5BQ86VZ2 330 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 PDCL2Q8N4E4 241 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 FAM160A2Q8N612 972 aaPredicted RBP12.65□□□□□ -0.38
CPSF7-211ENST00000477890 ZSWIM2Q8NEG5 633 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 MRPS31Q92665 395 aaKnown RBP12.65□□□□□ -0.38
CPSF7-211ENST00000477890 USP13Q92995 863 aaPredicted RBP12.65□□□□□ -0.38
CPSF7-211ENST00000477890 SAAL1Q96ER3 474 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 ACCSQ96QU6 501 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 FAM83CQ9BQN1 747 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 STRA6Q9BX79 667 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 HPS4Q9NQG7 708 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 TDP1Q9NUW8 608 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 SEL1LQ9UBV2 794 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 AGAP1Q9UPQ3 857 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 SPAG17Q6Q759 2223 aa12.65□□□□□ -0.38
CPSF7-211ENST00000477890 SDK1Q7Z5N4 2213 aa12.64□□□□□ -0.39
CPSF7-211ENST00000477890 OTOL1A6NHN0 477 aaPredicted RBP12.64□□□□□ -0.39
CPSF7-211ENST00000477890 MYMKA6NI61 221 aa12.64□□□□□ -0.39
CPSF7-211ENST00000477890 SLC30A4O14863 429 aa12.64□□□□□ -0.39
CPSF7-211ENST00000477890 GDF9O60383 454 aa12.64□□□□□ -0.39
CPSF7-211ENST00000477890 HUS1O60921 280 aa12.64□□□□□ -0.39
CPSF7-211ENST00000477890 GAP43P17677 238 aa12.64□□□□□ -0.39
CPSF7-211ENST00000477890 ACAT1P24752 427 aaKnown RBP12.64□□□□□ -0.39
CPSF7-211ENST00000477890 HOXA6P31267 233 aa12.64□□□□□ -0.39
CPSF7-211ENST00000477890 TXLNAP40222 546 aa12.64□□□□□ -0.39
CPSF7-211ENST00000477890 DDR2Q16832 855 aa12.64□□□□□ -0.39
CPSF7-211ENST00000477890 TMEM196Q5HYL7 178 aa12.64□□□□□ -0.39
CPSF7-211ENST00000477890 FSTL4Q6MZW2 842 aa12.64□□□□□ -0.39
CPSF7-211ENST00000477890 CC2D1AQ6P1N0 951 aaPredicted RBP12.64□□□□□ -0.39
CPSF7-211ENST00000477890 SV2BQ7L1I2 683 aa12.64□□□□□ -0.39
CPSF7-211ENST00000477890 BRSK2Q8IWQ3 736 aa12.64□□□□□ -0.39
CPSF7-211ENST00000477890 C1orf127Q8N9H9 656 aa12.64□□□□□ -0.39
CPSF7-211ENST00000477890 NOC3LQ8WTT2 800 aaKnown RBP12.64□□□□□ -0.39
CPSF7-211ENST00000477890 CACTINQ8WUQ7 758 aaKnown RBP12.64□□□□□ -0.39
CPSF7-211ENST00000477890 DNAJC19Q96DA6 116 aa12.64□□□□□ -0.39
CPSF7-211ENST00000477890 CLIC6Q96NY7 704 aa12.64□□□□□ -0.39
CPSF7-211ENST00000477890 KIF9Q9HAQ2 790 aa12.64□□□□□ -0.39
CPSF7-211ENST00000477890 DDX43Q9NXZ2 648 aaKnown RBP12.64□□□□□ -0.39
CPSF7-211ENST00000477890 RBAKQ9NYW8 714 aaPredicted RBP12.64□□□□□ -0.39
CPSF7-211ENST00000477890 FBXO2Q9UK22 296 aaPredicted RBP12.64□□□□□ -0.39
CPSF7-211ENST00000477890 L1RE1Q9UN81 338 aa12.64□□□□□ -0.39
CPSF7-211ENST00000477890 GREB1Q4ZG55 1949 aa12.64□□□□□ -0.39
CPSF7-211ENST00000477890 GOLGA8IPA6NC78 632 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 GOLGA8JA6NMD2 632 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 TRDMT1O14717 391 aaKnown RBP12.63□□□□□ -0.39
CPSF7-211ENST00000477890 ATG13O75143 517 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 LDHAP00338 332 aaKnown RBP12.63□□□□□ -0.39
CPSF7-211ENST00000477890 KRT19P08727 400 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 IDEP14735 1019 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 ARSAP15289 507 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 CYP2F1P24903 491 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 PXNP49023 591 aaPredicted RBP12.63□□□□□ -0.39
CPSF7-211ENST00000477890 CASP5P51878 434 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 RPL10AP62906 217 aaKnown RBP12.63□□□□□ -0.39
CPSF7-211ENST00000477890 MYL7Q01449 175 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 CEBPZQ03701 1054 aaKnown RBP12.63□□□□□ -0.39
CPSF7-211ENST00000477890 PPM1JQ5JR12 505 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 INTS6LQ5JSJ4 861 aaKnown RBP12.63□□□□□ -0.39
CPSF7-211ENST00000477890 SCARA3Q6AZY7 606 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 MON1AQ86VX9 555 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 SYCP3Q8IZU3 236 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 CSGALNACT2Q8N6G5 542 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 TTC16Q8NEE8 873 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 RIN3Q8TB24 985 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 LEO1Q8WVC0 666 aaPredicted RBP12.63□□□□□ -0.39
CPSF7-211ENST00000477890 CHFRQ96EP1 664 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 FAM84AQ96KN4 292 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 ACBD6Q9BR61 282 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 TRPC7Q9HCX4 862 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 UXTQ9UBK9 157 aaPredicted RBP12.63□□□□□ -0.39
CPSF7-211ENST00000477890 GTF3C4Q9UKN8 822 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 SLC8A2Q9UPR5 921 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 PCDHB13Q9Y5F0 798 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 SRPRBQ9Y5M8 271 aaKnown RBP12.63□□□□□ -0.39
CPSF7-211ENST00000477890 SNX9Q9Y5X1 595 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 EML5Q05BV3 1969 aa12.63□□□□□ -0.39
CPSF7-211ENST00000477890 TPRP12270 2363 aaKnown RBP12.63□□□□□ -0.39
CPSF7-211ENST00000477890 SOBPA7XYQ1 873 aa12.62□□□□□ -0.39
CPSF7-211ENST00000477890 AXIN1O15169 862 aa12.62□□□□□ -0.39
CPSF7-211ENST00000477890 FOXD2O60548 495 aaPredicted RBP12.62□□□□□ -0.39
CPSF7-211ENST00000477890 RNF40O75150 1001 aa12.62□□□□□ -0.39
CPSF7-211ENST00000477890 TADA3O75528 432 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms