RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 FBXL13Q8NEE6 735 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 MYCBPAPQ8TBZ2 947 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 NELFBQ8WX92 580 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 ERCC4Q92889 916 aaPredicted RBP13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 FGF13Q92913 245 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 E2F7Q96AV8 911 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 TRMT2BQ96GJ1 504 aaKnown RBP13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 TNIP3Q96KP6 325 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 DUSP9Q99956 384 aaKnown RBP13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 SYT15Q9BQS2 421 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 LRRC3Q9BY71 257 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 BCO2Q9BYV7 579 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 CRISPLD1Q9H336 500 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 TRPV4Q9HBA0 871 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 CEP72Q9P209 647 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 DACH1Q9UI36 760 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 POLIQ9UNA4 740 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 MRPS23Q9Y3D9 190 aaKnown RBP13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 LETM1O95202 739 aaPredicted RBP13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 HLA-DRAP01903 254 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 OR4Q2P0C623 313 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 CSH1P0DML2 217 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 CSH2P0DML3 217 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 GBP2P32456 591 aaPredicted RBP13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 PIK3CAP42336 1068 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 GCLMP48507 274 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 CAVIN1Q6NZI2 390 aaKnown RBP13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 DNAJB7Q7Z6W7 309 aaPredicted RBP13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 OSTM1Q86WC4 334 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 NPAS3Q8IXF0 933 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 CRYBG2Q8N1P7 616 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 SLC35C1Q96A29 364 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 SPATA17Q96L03 361 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 MYRFLQ96LU7 910 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 PGLYRP2Q96PD5 576 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 MYADMQ96S97 322 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 TMEM209Q96SK2 561 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 CORO1BQ9BR76 489 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 NIF3L1Q9GZT8 377 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 DNAJC25Q9H1X3 360 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 KCNK12Q9HB15 430 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 RAB20Q9NX57 234 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 UXTQ9UBK9 157 aaPredicted RBP13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 LIMD1Q9UGP4 676 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 MUTYHQ9UIF7 546 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 C2orf16Q68DN1 1984 aa13.2□□□□□ -0.3
CLCNKA-205ENST00000477360 PRR33A8MZF0 331 aa13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 TULP1O00294 542 aaPredicted RBP13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 NOL4O94818 638 aa13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 DDX6P26196 483 aaKnown RBP eCLIP13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 CDC25CP30307 473 aa13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 SIGLEC14Q08ET2 396 aa13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 CETN1Q12798 172 aa13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 HTR4Q13639 388 aa13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 MGAT5BQ3V5L5 792 aa13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 SCARA3Q6AZY7 606 aa13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 GET4Q7L5D6 327 aaPredicted RBP13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 TMC8Q8IU68 726 aa13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 SPATA2LQ8IUW3 424 aaPredicted RBP13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 B3GALNT2Q8NCR0 500 aa13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 OR6B3Q8NGW1 331 aa13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 TAS1R2Q8TE23 839 aa13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 KHSRPQ92945 711 aaKnown RBP eCLIP13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 FAM84AQ96KN4 292 aa13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 C8orf48Q96LL4 319 aa13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 MRPL45Q9BRJ2 306 aaKnown RBP13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 ELOVL4Q9GZR5 314 aa13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 HCFC1R1Q9NWW0 138 aa13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 ABI2Q9NYB9 513 aaPredicted RBP13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 MAGEC2Q9UBF1 373 aaPredicted RBP13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 NXF1Q9UBU9 619 aaKnown RBP13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 GTF3C4Q9UKN8 822 aa13.19□□□□□ -0.3
CLCNKA-205ENST00000477360 ATP8B3O60423 1300 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 MYBPHLA2RUH7 354 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 TRIM49BA6NDI0 452 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 A8MXQ7 604 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 BIN1O00499 593 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 TRIM66O15016 1216 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 ECI2O75521 394 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 TRIM49P0CI25 452 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 TRIM49CP0CI26 452 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 CCDC192P0DO97 292 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 PFKLP17858 780 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 PTPN1P18031 435 aaKnown RBP13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 ATF6P18850 670 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 LMO2P25791 158 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 ASPAP45381 313 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 PPP3CCP48454 512 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 NOP14P78316 857 aaKnown RBP13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 SLC5A9Q2M3M2 681 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 WDR44Q5JSH3 913 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 TMEM31Q5JXX7 168 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 TRIM67Q6ZTA4 783 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 TRIM59Q8IWR1 403 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 ITFG1Q8TB96 612 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 FEZF2Q8TBJ5 459 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 SEPT5Q99719 369 aaPredicted RBP13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 CRTAC1Q9NQ79 661 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 SLC2A4RGQ9NR83 387 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 TMLHEQ9NVH6 421 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms