RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 PPP2R3BQ9Y5P8 575 aa16.04■□□□□ 0.16
CLSTN1-205ENST00000477264 WASF2Q9Y6W5 498 aa16.04■□□□□ 0.16
CLSTN1-205ENST00000477264 NDUFB10O96000 172 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 CIITAP33076 1130 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 PHBP35232 272 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 SLC16A2P36021 539 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 VAMP7P51809 220 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 NEK3P51956 506 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 CDC16Q13042 620 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 IKQ13123 557 aaPredicted RBP16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 COG2Q14746 738 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 P3H1Q32P28 736 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 TMEM259Q4ZIN3 620 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 TTBK2Q6IQ55 1244 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 DDX27Q96GQ7 796 aaKnown RBP16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 FIZ1Q96SL8 496 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 TMEM120AQ9BXJ8 343 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 VPS37BQ9H9H4 285 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 PTTG2Q9NZH5 202 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 DCTN4Q9UJW0 460 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 SHOC2Q9UQ13 582 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 TMX2Q9Y320 296 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 A0A0G2JND7 137 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 FGFR1P11362 822 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 BMP3P12645 472 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 SREBF1P36956 1147 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 RGS2P41220 211 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 ECE1P42892 770 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 HIRAP54198 1017 aaPredicted RBP16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 GEMIN4P57678 1058 aaKnown RBP16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 GRM2Q14416 872 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 DRICH1Q6PGQ1 229 aaPredicted RBP16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 SAMD1Q6SPF0 538 aaPredicted RBP16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 CENPUQ71F23 418 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 IRGQQ8WZA9 623 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 SLC5A5Q92911 643 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 LENG9Q96B70 501 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 FAM161BQ96MY7 647 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 GINM1Q9NU53 330 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 GALNT8Q9NY28 637 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 NUMBLQ9Y6R0 609 aa16.03■□□□□ 0.16
CLSTN1-205ENST00000477264 ALOX15BO15296 676 aa16.02■□□□□ 0.16
CLSTN1-205ENST00000477264 ZCCHC18P0CG32 403 aa16.02■□□□□ 0.16
CLSTN1-205ENST00000477264 SERPINB3P29508 390 aa16.02■□□□□ 0.16
CLSTN1-205ENST00000477264 ACTR3P61158 418 aa16.02■□□□□ 0.16
CLSTN1-205ENST00000477264 CDK18Q07002 472 aa16.02■□□□□ 0.16
CLSTN1-205ENST00000477264 KLHL38Q2WGJ6 581 aa16.02■□□□□ 0.16
CLSTN1-205ENST00000477264 ACBD5Q5T8D3 534 aaPredicted RBP16.02■□□□□ 0.16
CLSTN1-205ENST00000477264 KYAT3Q6YP21 454 aaKnown RBP16.02■□□□□ 0.16
CLSTN1-205ENST00000477264 SPATA24Q86W54 205 aa16.02■□□□□ 0.16
CLSTN1-205ENST00000477264 SCUBE1Q8IWY4 988 aa16.02■□□□□ 0.16
CLSTN1-205ENST00000477264 ZNF276Q8N554 614 aa16.02■□□□□ 0.16
CLSTN1-205ENST00000477264 LENG1Q96BZ8 264 aaPredicted RBP16.02■□□□□ 0.16
CLSTN1-205ENST00000477264 MAML3Q96JK9 1138 aa16.02■□□□□ 0.16
CLSTN1-205ENST00000477264 MAK16Q9BXY0 300 aaKnown RBP16.02■□□□□ 0.16
CLSTN1-205ENST00000477264 ZNF341Q9BYN7 854 aa16.02■□□□□ 0.16
CLSTN1-205ENST00000477264 R3HDM2Q9Y2K5 976 aaKnown RBP16.02■□□□□ 0.16
CLSTN1-205ENST00000477264 USP17L15C9J2P7 530 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 USP17L10C9JJH3 530 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 USP17L13C9JLJ4 530 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 USP17L11C9JVI0 530 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 USP17L18D6R9N7 530 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 USP17L22D6RA61 530 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 USP17L17D6RBQ6 530 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 USP17L19D6RCP7 530 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 USP17L20D6RJB6 530 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 CSDE1O75534 798 aaKnown RBP16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 TM7SF2O76062 418 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 ASLP04424 464 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 FAM200BP0CF97 657 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 KRT4P19013 534 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 ADRA1DP25100 572 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 USP17L24Q0WX57 530 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 ASPHQ12797 758 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 USP17L6PQ6QN14 398 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 NSMFQ6X4W1 530 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 GSTA5Q7RTV2 222 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 KATNAL2Q8IYT4 538 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 ACER1Q8TDN7 264 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 OXNAD1Q96HP4 312 aaPredicted RBP16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 C17orf75Q9HAS0 396 aa16.02■□□□□ 0.15
CLSTN1-205ENST00000477264 FCHO1O14526 889 aa16.01■□□□□ 0.15
CLSTN1-205ENST00000477264 VAV1P15498 845 aa16.01■□□□□ 0.15
CLSTN1-205ENST00000477264 CYP11B1P15538 503 aa16.01■□□□□ 0.15
CLSTN1-205ENST00000477264 MXI1P50539 228 aa16.01■□□□□ 0.15
CLSTN1-205ENST00000477264 CYP4A11Q02928 519 aa16.01■□□□□ 0.15
CLSTN1-205ENST00000477264 PPP2R5CQ13362 524 aa16.01■□□□□ 0.15
CLSTN1-205ENST00000477264 LRRC6Q86X45 466 aa16.01■□□□□ 0.15
CLSTN1-205ENST00000477264 ALDH16A1Q8IZ83 802 aa16.01■□□□□ 0.15
CLSTN1-205ENST00000477264 SYCP3Q8IZU3 236 aa16.01■□□□□ 0.15
CLSTN1-205ENST00000477264 OR6Y1Q8NGX8 325 aa16.01■□□□□ 0.15
CLSTN1-205ENST00000477264 DCPSQ96C86 337 aaKnown RBP16.01■□□□□ 0.15
CLSTN1-205ENST00000477264 STRA6Q9BX79 667 aa16.01■□□□□ 0.15
CLSTN1-205ENST00000477264 CHORDC1Q9UHD1 332 aaPredicted RBP16.01■□□□□ 0.15
CLSTN1-205ENST00000477264 POLR2AP24928 1970 aaKnown RBP16■□□□□ 0.15
CLSTN1-205ENST00000477264 KLF11O14901 512 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 RALAP11233 206 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 TSHRP16473 764 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 AMPD1P23109 780 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 IRX4P78413 519 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms