RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 SURF1Q15526 300 aa22.18■■□□□ 1.14
LIMS2-214ENST00000476932 PPP1R21Q6ZMI0 780 aa22.18■■□□□ 1.14
LIMS2-214ENST00000476932 SHOC2Q9UQ13 582 aa22.18■■□□□ 1.14
LIMS2-214ENST00000476932 ARL2BPQ9Y2Y0 163 aa22.18■■□□□ 1.14
LIMS2-214ENST00000476932 FAM47DPA6NHR8 397 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 LGR5O75473 907 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 MXD4Q14582 209 aaPredicted RBP22.17■■□□□ 1.14
LIMS2-214ENST00000476932 HSDL1Q3SXM5 330 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 ZBTB8OSQ8IWT0 167 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 KIAA0319LQ8IZA0 1049 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 CCDC63Q8NA47 563 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 GPR20Q99678 358 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 SPATC1LQ9H0A9 340 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 FARP1Q9Y4F1 1045 aaPredicted RBP22.17■■□□□ 1.14
LIMS2-214ENST00000476932 ZSWIM8A7E2V4 1837 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 SOCS7O14512 581 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 ALOX15BO15296 676 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 B4GALT5O43286 388 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 B4GALT4O60513 344 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 LRCH4O75427 683 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 RAP1GAPP47736 663 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 MGAT5Q09328 741 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 EEF1DP3Q658K8 133 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 MPZL3Q6UWV2 235 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 TSHZ1Q6ZSZ6 1077 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 TMEM130Q8N3G9 435 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 DENND1AQ8TEH3 1009 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 TCP11Q8WWU5 503 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 RMDN2Q96LZ7 410 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 FGD4Q96M96 766 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 GPRC5DQ9NZD1 345 aa22.17■■□□□ 1.14
LIMS2-214ENST00000476932 SAE1Q9UBE0 346 aaPredicted RBP22.17■■□□□ 1.14
LIMS2-214ENST00000476932 GOLGA8SH3BPF8 625 aa22.16■■□□□ 1.14
LIMS2-214ENST00000476932 ASMTLO95671 621 aa22.16■■□□□ 1.14
LIMS2-214ENST00000476932 GJB1P08034 283 aa22.16■■□□□ 1.14
LIMS2-214ENST00000476932 MTFR1Q15390 333 aa22.16■■□□□ 1.14
LIMS2-214ENST00000476932 TAZQ16635 292 aa22.16■■□□□ 1.14
LIMS2-214ENST00000476932 NCAPG2Q86XI2 1143 aa22.16■■□□□ 1.14
LIMS2-214ENST00000476932 THNSL1Q8IYQ7 743 aa22.16■■□□□ 1.14
LIMS2-214ENST00000476932 ANKLE1Q8NAG6 615 aa22.16■■□□□ 1.14
LIMS2-214ENST00000476932 KIF9Q9HAQ2 790 aa22.16■■□□□ 1.14
LIMS2-214ENST00000476932 PPP1R1BQ9UD71 204 aaPredicted RBP22.16■■□□□ 1.14
LIMS2-214ENST00000476932 STRIP2Q9ULQ0 834 aa22.16■■□□□ 1.14
LIMS2-214ENST00000476932 SIGLEC16A6NMB1 481 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 GAS2O43903 313 aaKnown RBP22.15■■□□□ 1.14
LIMS2-214ENST00000476932 BANF1O75531 89 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 PSMA2P25787 234 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 GDF10P55107 478 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 NR1H3Q13133 447 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 PKN2Q16513 984 aaKnown RBP22.15■■□□□ 1.14
LIMS2-214ENST00000476932 SMTNL2Q2TAL5 461 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 DLK2Q6UY11 383 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 ZNF668Q96K58 619 aaPredicted RBP22.15■■□□□ 1.14
LIMS2-214ENST00000476932 CEP83Q9Y592 693 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 SGK1O00141 431 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 SPAG7O75391 227 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 OSTNP61366 133 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 GAD2Q05329 585 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 BNIP1Q12981 228 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 CDR2LQ86X02 465 aaPredicted RBP22.15■■□□□ 1.14
LIMS2-214ENST00000476932 TMEM192Q8IY95 271 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 ZBED8Q8IZ13 594 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 FITM2Q8N6M3 262 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 ACTL9Q8TC94 416 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 MAGEC3Q8TD91 643 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 TRAPPC12Q8WVT3 735 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 BCO2Q9BYV7 579 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 SDCBP2Q9H190 292 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 LHX5Q9H2C1 402 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 FZD8Q9H461 694 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 UBN1Q9NPG3 1134 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 SIX4Q9UIU6 781 aa22.15■■□□□ 1.14
LIMS2-214ENST00000476932 CLUHO75153 1309 aa22.14■■□□□ 1.14
LIMS2-214ENST00000476932 CFAP73A6NFT4 308 aa22.14■■□□□ 1.14
LIMS2-214ENST00000476932 POC1B-GALNT4F8VUJ3 575 aa22.14■■□□□ 1.14
LIMS2-214ENST00000476932 PRPF4O43172 522 aaKnown RBP eCLIP22.14■■□□□ 1.14
LIMS2-214ENST00000476932 OTUD4Q01804 1114 aaKnown RBP22.14■■□□□ 1.14
LIMS2-214ENST00000476932 ATF7IP2Q5U623 682 aa22.14■■□□□ 1.14
LIMS2-214ENST00000476932 RHPN2Q8IUC4 686 aa22.14■■□□□ 1.14
LIMS2-214ENST00000476932 C2orf40Q9H1Z8 148 aa22.14■■□□□ 1.14
LIMS2-214ENST00000476932 C10orf88Q9H8K7 445 aa22.14■■□□□ 1.14
LIMS2-214ENST00000476932 ZWILCHQ9H900 591 aa22.14■■□□□ 1.14
LIMS2-214ENST00000476932 NXF1Q9UBU9 619 aaKnown RBP22.14■■□□□ 1.14
LIMS2-214ENST00000476932 EFR3BQ9Y2G0 817 aa22.14■■□□□ 1.14
LIMS2-214ENST00000476932 ACKR2O00590 384 aa22.14■■□□□ 1.13
LIMS2-214ENST00000476932 ATP6V1G2O95670 118 aa22.14■■□□□ 1.13
LIMS2-214ENST00000476932 IFNB1P01574 187 aa22.14■■□□□ 1.13
LIMS2-214ENST00000476932 KRT3P12035 628 aa22.14■■□□□ 1.13
LIMS2-214ENST00000476932 RAD23BP54727 409 aa22.14■■□□□ 1.13
LIMS2-214ENST00000476932 GPX6P59796 221 aa22.14■■□□□ 1.13
LIMS2-214ENST00000476932 YWHAEP62258 255 aaKnown RBP22.14■■□□□ 1.13
LIMS2-214ENST00000476932 DYNLT1P63172 113 aa22.14■■□□□ 1.13
LIMS2-214ENST00000476932 LACTBP83111 547 aaPredicted RBP22.14■■□□□ 1.13
LIMS2-214ENST00000476932 PDIA2Q13087 525 aaKnown RBP22.14■■□□□ 1.13
LIMS2-214ENST00000476932 KCNT1Q5JUK3 1230 aa22.14■■□□□ 1.13
LIMS2-214ENST00000476932 ANKRD22Q5VYY1 191 aa22.14■■□□□ 1.13
LIMS2-214ENST00000476932 CAPN12Q6ZSI9 719 aa22.14■■□□□ 1.13
LIMS2-214ENST00000476932 TBC1D1Q86TI0 1168 aaPredicted RBP22.14■■□□□ 1.13
LIMS2-214ENST00000476932 FNIP1Q8TF40 1166 aa22.14■■□□□ 1.13
LIMS2-214ENST00000476932 CPXM1Q96SM3 734 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms