RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 ZNF699Q32M78 642 aa17.37■□□□□ 0.37
TMEM53-208ENST00000476724 GSTA5Q7RTV2 222 aa17.37■□□□□ 0.37
TMEM53-208ENST00000476724 ERICH1Q86X53 443 aa17.37■□□□□ 0.37
TMEM53-208ENST00000476724 FZD8Q9H461 694 aa17.37■□□□□ 0.37
TMEM53-208ENST00000476724 MGAMO43451 1857 aa17.37■□□□□ 0.37
TMEM53-208ENST00000476724 MED7O43513 233 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 IL18RAPO95256 599 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 HOXC6P09630 235 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 INSRRP14616 1297 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 CYP2B6P20813 491 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 BRD2P25440 801 aaKnown RBP17.36■□□□□ 0.37
TMEM53-208ENST00000476724 POLR2BP30876 1174 aaKnown RBP17.36■□□□□ 0.37
TMEM53-208ENST00000476724 INHBEP58166 350 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 LONRF1Q17RB8 773 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 PPP1R15BQ5SWA1 713 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 IZUMO3Q5VZ72 239 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 HIBCHQ6NVY1 386 aaPredicted RBP17.36■□□□□ 0.37
TMEM53-208ENST00000476724 ANKS4BQ8N8V4 417 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 OR6J1Q8NGC5 347 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 USP6NLQ92738 828 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 ARHGEF2Q92974 986 aaKnown RBP17.36■□□□□ 0.37
TMEM53-208ENST00000476724 LENG1Q96BZ8 264 aaPredicted RBP17.36■□□□□ 0.37
TMEM53-208ENST00000476724 ZFYVE28Q9HCC9 887 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 LIASO43766 372 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 MMP3P08254 477 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 GJC1P36383 396 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 CLCN3P51790 818 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 TFAMQ00059 246 aaKnown RBP17.36■□□□□ 0.37
TMEM53-208ENST00000476724 PPARDQ03181 441 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 ACTN3Q08043 901 aaPredicted RBP17.36■□□□□ 0.37
TMEM53-208ENST00000476724 STAT4Q14765 748 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 CNGA2Q16280 664 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 KYNUQ16719 465 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 ZFYVE27Q5T4F4 411 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 ATF7IP2Q5U623 682 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 EFCAB12Q6NXP0 572 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 MCEEQ96PE7 176 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 NSRP1Q9H0G5 558 aaKnown RBP17.36■□□□□ 0.37
TMEM53-208ENST00000476724 LHX5Q9H2C1 402 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 TMEM51Q9NW97 253 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 SLC5A4Q9NY91 659 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 NINJ2Q9NZG7 142 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 CAPN7Q9Y6W3 813 aa17.36■□□□□ 0.37
TMEM53-208ENST00000476724 C22orf31O95567 290 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 KRT1P04264 644 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 IQSEC1Q6DN90 963 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 SPOCD1Q6ZMY3 1216 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 POLNQ7Z5Q5 900 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 TAX1BP1Q86VP1 789 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 RHPN2Q8IUC4 686 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 ZCCHC9Q8N567 271 aaKnown RBP17.35■□□□□ 0.37
TMEM53-208ENST00000476724 WDTC1Q8N5D0 677 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 CCDC197Q8NCU1 140 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 XYLT2Q9H1B5 865 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 GJD2Q9UKL4 321 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 EFR3BQ9Y2G0 817 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 GOLGA6L7A0A1B0GV03 622 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 H0YHG0 523 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 GJB6O95452 261 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 ABHD2P08910 425 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 ASPAP45381 313 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 LACTBP83111 547 aaPredicted RBP17.35■□□□□ 0.37
TMEM53-208ENST00000476724 TNFAIP2Q03169 654 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 ZNF252P-AS1Q0IIN9 211 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 SREBF2Q12772 1141 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 TFDP3Q5H9I0 405 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 SCARA3Q6AZY7 606 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 CYP4F22Q6NT55 531 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 PIGWQ7Z7B1 504 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 CNPY4Q8N129 248 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 RIBC1Q8N443 379 aaPredicted RBP17.35■□□□□ 0.37
TMEM53-208ENST00000476724 PRMT1Q99873 361 aaKnown RBP17.35■□□□□ 0.37
TMEM53-208ENST00000476724 NFKBIZQ9BYH8 718 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 KDM4CQ9H3R0 1056 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 LGALS13Q9UHV8 139 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 TNFSF13BQ9Y275 285 aa17.35■□□□□ 0.37
TMEM53-208ENST00000476724 CDH16O75309 829 aa17.34■□□□□ 0.37
TMEM53-208ENST00000476724 WEE2P0C1S8 567 aa17.34■□□□□ 0.37
TMEM53-208ENST00000476724 GHRP10912 638 aa17.34■□□□□ 0.37
TMEM53-208ENST00000476724 VPS41P49754 854 aa17.34■□□□□ 0.37
TMEM53-208ENST00000476724 POU5F1BQ06416 359 aa17.34■□□□□ 0.37
TMEM53-208ENST00000476724 ITIH4Q14624 930 aa17.34■□□□□ 0.37
TMEM53-208ENST00000476724 ZNF394Q53GI3 561 aa17.34■□□□□ 0.37
TMEM53-208ENST00000476724 LACTB2Q53H82 288 aaPredicted RBP17.34■□□□□ 0.37
TMEM53-208ENST00000476724 MFSD7Q6UXD7 560 aa17.34■□□□□ 0.37
TMEM53-208ENST00000476724 PAXIP1Q6ZW49 1069 aaPredicted RBP17.34■□□□□ 0.37
TMEM53-208ENST00000476724 ANKS1BQ7Z6G8 1248 aa17.34■□□□□ 0.37
TMEM53-208ENST00000476724 THNSL1Q8IYQ7 743 aa17.34■□□□□ 0.37
TMEM53-208ENST00000476724 SMC1BQ8NDV3 1235 aa17.34■□□□□ 0.37
TMEM53-208ENST00000476724 FNIP1Q8TF40 1166 aa17.34■□□□□ 0.37
TMEM53-208ENST00000476724 FRMD8P1Q9BZ68 369 aaPredicted RBP17.34■□□□□ 0.37
TMEM53-208ENST00000476724 RPF1Q9H9Y2 349 aaKnown RBP17.34■□□□□ 0.37
TMEM53-208ENST00000476724 WDR35Q9P2L0 1181 aa17.34■□□□□ 0.37
TMEM53-208ENST00000476724 ZNF148Q9UQR1 794 aa17.34■□□□□ 0.37
TMEM53-208ENST00000476724 ACTL7BQ9Y614 415 aa17.34■□□□□ 0.37
TMEM53-208ENST00000476724 TMEM88BA6NKF7 163 aa17.33■□□□□ 0.37
TMEM53-208ENST00000476724 F8VP50 259 aa17.33■□□□□ 0.37
TMEM53-208ENST00000476724 H3BRB1 525 aa17.33■□□□□ 0.37
TMEM53-208ENST00000476724 INO80B-WBP1J3KQ70 363 aa17.33■□□□□ 0.37
TMEM53-208ENST00000476724 DNALI1O14645 258 aaPredicted RBP17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms