RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 UNC13DQ70J99 1090 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 UBE3BQ7Z3V4 1068 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 GALNT5Q7Z7M9 940 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 ADGRE4PQ86SQ3 457 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 GATAD2AQ86YP4 633 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 CPOQ8IVL8 374 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 KBTBD2Q8IY47 623 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 AOPEPQ8N6M6 819 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 DACT3Q96B18 629 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-207ENST00000476169 TRIM43Q96BQ3 446 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-207ENST00000476169 NMD3Q96D46 503 aaKnown RBP4.76□□□□□ -1.65
VPS13D-207ENST00000476169 HVCN1Q96D96 273 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 COG8Q96MW5 612 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 NAP1L5Q96NT1 182 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-207ENST00000476169 DPH1Q9BZG8 443 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 ADAM7Q9H2U9 754 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 SH3GLB2Q9NR46 395 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 IGSF9Q9P2J2 1179 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 ORC3Q9UBD5 711 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-207ENST00000476169 FEM1BQ9UK73 627 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 GPR34Q9UPC5 381 aa4.76□□□□□ -1.65
VPS13D-207ENST00000476169 SMG5Q9UPR3 1016 aaKnown RBP4.76□□□□□ -1.65
VPS13D-207ENST00000476169 MAGED1Q9Y5V3 778 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-207ENST00000476169 RPGRIP1LQ68CZ1 1315 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 A0A1W2PRX2 142 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 FAM170AA1A519 330 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 UBE2QL1A1L167 161 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 MROH6A6NGR9 719 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 FCHO1O14526 889 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 SLC43A1O75387 559 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 GNAI2P04899 355 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 ITGA2BP08514 1039 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 ZSCAN22P10073 491 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-207ENST00000476169 MYCLP12524 364 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-207ENST00000476169 IDEP14735 1019 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 RXRAP19793 462 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 AFF3P51826 1226 aaKnown RBP4.75□□□□□ -1.65
VPS13D-207ENST00000476169 DRG2P55039 364 aaKnown RBP4.75□□□□□ -1.65
VPS13D-207ENST00000476169 NR1H2P55055 460 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 RAP2BP61225 183 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 DCAF7P61962 342 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 PSMC1P62191 440 aaKnown RBP4.75□□□□□ -1.65
VPS13D-207ENST00000476169 ZBED6P86452 979 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 TLE2Q04725 743 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 MESP2Q0VG99 397 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 RAB32Q13637 225 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 RIN1Q13671 783 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 FAM214AQ32MH5 1076 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 BORAQ6PGQ7 559 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 CATSPERGQ6ZRH7 1159 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 NEK10Q6ZWH5 1172 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 ENOSF1Q7L5Y1 443 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 FAM124AQ86V42 546 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 ZNF761Q86XN6 746 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-207ENST00000476169 ANKRD52Q8NB46 1076 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 SHCBP1Q8NEM2 672 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 NLGN4YQ8NFZ3 816 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-207ENST00000476169 SLC35B2Q8TB61 432 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 STT3BQ8TCJ2 826 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 SPPL3Q8TCT6 385 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 IPCEF1Q8WWN9 437 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-207ENST00000476169 CFHR4Q92496 578 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 MAML1Q92585 1016 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 ZUFSPQ96AP4 578 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 RSRC1Q96IZ7 334 aaKnown RBP4.75□□□□□ -1.65
VPS13D-207ENST00000476169 FAM84AQ96KN4 292 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 TTC14Q96N46 770 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 TCF25Q9BQ70 676 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 NDC1Q9BTX1 674 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 KATNAL1Q9BW62 490 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 LMAN2LQ9H0V9 348 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 C12orf65Q9H3J6 166 aaKnown RBP4.75□□□□□ -1.65
VPS13D-207ENST00000476169 MLXIPQ9HAP2 919 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 SMURF2Q9HAU4 748 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 PREBQ9HCU5 417 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 RLIMQ9NVW2 624 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 NKIRAS2Q9NYR9 191 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 JKAMPQ9P055 326 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 SRP68Q9UHB9 627 aaKnown RBP4.75□□□□□ -1.65
VPS13D-207ENST00000476169 SCAF8Q9UPN6 1271 aaKnown RBP4.75□□□□□ -1.65
VPS13D-207ENST00000476169 PAXBP1Q9Y5B6 917 aa4.75□□□□□ -1.65
VPS13D-207ENST00000476169 PMS2P1A4D2B8 440 aa4.74□□□□□ -1.65
VPS13D-207ENST00000476169 PRSS29PA6NIE9 313 aa4.74□□□□□ -1.65
VPS13D-207ENST00000476169 B5MCH6 92 aa4.74□□□□□ -1.65
VPS13D-207ENST00000476169 PJA2O43164 708 aa4.74□□□□□ -1.65
VPS13D-207ENST00000476169 HOXA3O43365 443 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-207ENST00000476169 AHCYL1O43865 530 aa4.74□□□□□ -1.65
VPS13D-207ENST00000476169 PLOD3O60568 738 aa4.74□□□□□ -1.65
VPS13D-207ENST00000476169 RASSF9O75901 435 aa4.74□□□□□ -1.65
VPS13D-207ENST00000476169 STC2O76061 302 aa4.74□□□□□ -1.65
VPS13D-207ENST00000476169 HAUS5O94927 633 aa4.74□□□□□ -1.65
VPS13D-207ENST00000476169 RTN3O95197 1032 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-207ENST00000476169 ABHD16AO95870 558 aa4.74□□□□□ -1.65
VPS13D-207ENST00000476169 POMCP01189 267 aa4.74□□□□□ -1.65
VPS13D-207ENST00000476169 AMHP03971 560 aa4.74□□□□□ -1.65
VPS13D-207ENST00000476169 SLC3A2P08195 630 aaKnown RBP4.74□□□□□ -1.65
VPS13D-207ENST00000476169 ALAS1P13196 640 aa4.74□□□□□ -1.65
VPS13D-207ENST00000476169 JUPP14923 745 aa4.74□□□□□ -1.65
VPS13D-207ENST00000476169 SLC6A4P31645 630 aa4.74□□□□□ -1.65
VPS13D-207ENST00000476169 NPTX2P47972 431 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms