RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 ZFHX2Q9C0A1 2572 aaPredicted RBP10.66□□□□□ -0.7
PTPN7-208ENST00000476061 ZNF233A6NK53 670 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 SLC38A8A6NNN8 435 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 SPTLC2O15270 562 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 EIF3DO15371 548 aaKnown RBP eCLIP10.65□□□□□ -0.7
PTPN7-208ENST00000476061 CUTAO60888 179 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 NOL4O94818 638 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 PRPF6O94906 941 aaKnown RBP10.65□□□□□ -0.7
PTPN7-208ENST00000476061 TMEM191BP0C7N4 346 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 CTHP32929 405 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 CNR2P34972 360 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 NLRP12P59046 1061 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 SNRPFP62306 86 aaKnown RBP10.65□□□□□ -0.7
PTPN7-208ENST00000476061 CYP4F8P98187 520 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 MYO1EQ12965 1108 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 PUM1Q14671 1186 aaKnown RBP eCLIP10.65□□□□□ -0.75e-6■□□□□ 10.2
PTPN7-208ENST00000476061 CFAP221Q4G0U5 840 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 TSSK4Q6SA08 328 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 LIMS2Q7Z4I7 341 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 TMEM150AQ86TG1 271 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 KIAA2013Q8IYS2 634 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 PDILTQ8N807 584 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 ZSWIM2Q8NEG5 633 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 ZNF507Q8TCN5 953 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 GIPC2Q8TF65 315 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 SNX21Q969T3 373 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 FUBP3Q96I24 572 aaKnown RBP eCLIP10.65□□□□□ -0.7
PTPN7-208ENST00000476061 ANKRD36BP1Q96IX9 119 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 CEP295NLQ96MC4 621 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 HINFPQ9BQA5 517 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 FGFBP2Q9BYJ0 223 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 TRIM9Q9C026 710 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 MAGEF1Q9HAY2 307 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 PDE11AQ9HCR9 933 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 TMLHEQ9NVH6 421 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 INTS13Q9NVM9 706 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 GTSE1Q9NYZ3 720 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 NCDNQ9UBB6 729 aa10.65□□□□□ -0.7
PTPN7-208ENST00000476061 UBE4BO95155 1302 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 KIAA1549LQ6ZVL6 1849 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 GOLGA8IPA6NC78 632 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 GOLGA8JA6NMD2 632 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 PRPF40AO75400 957 aaKnown RBP10.64□□□□□ -0.71
PTPN7-208ENST00000476061 PRAMEF12O95522 483 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 KRT19P08727 400 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 FAM163BP0C2L3 166 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 SDHBP21912 280 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 PCSK1P29120 753 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 HOXA6P31267 233 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 AVPR1AP37288 418 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 CCINQ13939 588 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 GAS6Q14393 721 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 ZNF268Q14587 947 aaPredicted RBP10.64□□□□□ -0.71
PTPN7-208ENST00000476061 ITPRIPL2Q3MIP1 535 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 FAM171BQ6P995 826 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 TXNDC11Q6PKC3 985 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 EPM2AIP1Q7L775 607 aaPredicted RBP10.64□□□□□ -0.71
PTPN7-208ENST00000476061 MON1AQ86VX9 555 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 WDR49Q8IV35 697 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 DCLK2Q8N568 766 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 IQUBQ8NA54 791 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 MRPS31Q92665 395 aaKnown RBP10.64□□□□□ -0.71
PTPN7-208ENST00000476061 RMDN1Q96DB5 314 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 FAM83CQ9BQN1 747 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 PI4K2AQ9BTU6 479 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 MTMR12Q9C0I1 747 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 PCIF1Q9H4Z3 704 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 TDP1Q9NUW8 608 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 DLL3Q9NYJ7 618 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 SIX4Q9UIU6 781 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 SMG5Q9UPR3 1016 aaKnown RBP10.64□□□□□ -0.71
PTPN7-208ENST00000476061 R3HCC1Q9Y3T6 440 aaKnown RBP10.64□□□□□ -0.71
PTPN7-208ENST00000476061 SNX9Q9Y5X1 595 aa10.64□□□□□ -0.71
PTPN7-208ENST00000476061 TNNC2P02585 160 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 PFKLP17858 780 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 MAGEA11P43364 429 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 SOX9P48436 509 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 AMPD2Q01433 879 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 SATB1Q01826 763 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 EHHADHQ08426 723 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 BFSP1Q12934 665 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 RUNX3Q13761 415 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 MAPRE1Q15691 268 aaKnown RBP10.63□□□□□ -0.71
PTPN7-208ENST00000476061 DUOXA2Q1HG44 320 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 SOWAHAQ2M3V2 549 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 WDR44Q5JSH3 913 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 ATL3Q6DD88 541 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 SHC4Q6S5L8 630 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 C4orf50Q6ZRC1 276 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 SPATA2LQ8IUW3 424 aaPredicted RBP10.63□□□□□ -0.71
PTPN7-208ENST00000476061 HSCBQ8IWL3 235 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 ADGRF2Q8IZF7 708 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 MAB21L3Q8N8X9 362 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 USP13Q92995 863 aaPredicted RBP10.63□□□□□ -0.71
PTPN7-208ENST00000476061 ZFYVE19Q96K21 471 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 C7orf25Q9BPX7 421 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 GKN1Q9NS71 199 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 HSPBP1Q9NZL4 362 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 CGNQ9P2M7 1197 aaKnown RBP10.63□□□□□ -0.71
PTPN7-208ENST00000476061 GTF3C4Q9UKN8 822 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms