RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 DPYDQ12882 1025 aa16.24■□□□□ 0.19
VARS-223ENST00000474643 STK4Q13043 487 aa16.24■□□□□ 0.19
VARS-223ENST00000474643 SURF1Q15526 300 aa16.24■□□□□ 0.19
VARS-223ENST00000474643 NFE2Q16621 373 aaPredicted RBP16.24■□□□□ 0.19
VARS-223ENST00000474643 C1orf228Q6PIY5 440 aa16.24■□□□□ 0.19
VARS-223ENST00000474643 GPIHBP1Q8IV16 184 aa16.24■□□□□ 0.19
VARS-223ENST00000474643 ARID3BQ8IVW6 561 aaPredicted RBP16.24■□□□□ 0.19
VARS-223ENST00000474643 TMEM86AQ8N2M4 240 aa16.24■□□□□ 0.19
VARS-223ENST00000474643 LRRC52Q8N7C0 313 aa16.24■□□□□ 0.19
VARS-223ENST00000474643 SECISBP2LQ93073 1101 aaKnown RBP16.24■□□□□ 0.19
VARS-223ENST00000474643 MTMR12Q9C0I1 747 aa16.24■□□□□ 0.19
VARS-223ENST00000474643 DNAJC25Q9H1X3 360 aa16.24■□□□□ 0.19
VARS-223ENST00000474643 THG1LQ9NWX6 298 aaKnown RBP16.24■□□□□ 0.19
VARS-223ENST00000474643 MAGED2Q9UNF1 606 aaPredicted RBP16.24■□□□□ 0.19
VARS-223ENST00000474643 SNX9Q9Y5X1 595 aa16.24■□□□□ 0.19
VARS-223ENST00000474643 CFAP54Q96N23 3096 aa16.23■□□□□ 0.19
VARS-223ENST00000474643 SLC38A8A6NNN8 435 aa16.23■□□□□ 0.19
VARS-223ENST00000474643 GOLGA6L22H0YM25 854 aa16.23■□□□□ 0.19
VARS-223ENST00000474643 CLIC2O15247 247 aa16.23■□□□□ 0.19
VARS-223ENST00000474643 AVPR1AP37288 418 aa16.23■□□□□ 0.19
VARS-223ENST00000474643 CYP2J2P51589 502 aa16.23■□□□□ 0.19
VARS-223ENST00000474643 CYP4F8P98187 520 aa16.23■□□□□ 0.19
VARS-223ENST00000474643 PNOCQ13519 176 aa16.23■□□□□ 0.19
VARS-223ENST00000474643 KNOP1Q1ED39 458 aaKnown RBP16.23■□□□□ 0.19
VARS-223ENST00000474643 STXBP5Q5T5C0 1151 aa16.23■□□□□ 0.19
VARS-223ENST00000474643 TTC16Q8NEE8 873 aa16.23■□□□□ 0.19
VARS-223ENST00000474643 ENGASEQ8NFI3 743 aa16.23■□□□□ 0.19
VARS-223ENST00000474643 MSANTD3Q96H12 275 aa16.23■□□□□ 0.19
VARS-223ENST00000474643 PDE11AQ9HCR9 933 aa16.23■□□□□ 0.19
VARS-223ENST00000474643 AGPAT3Q9NRZ7 376 aa16.23■□□□□ 0.19
VARS-223ENST00000474643 RMND1Q9NWS8 449 aa16.23■□□□□ 0.19
VARS-223ENST00000474643 DDX43Q9NXZ2 648 aaKnown RBP16.23■□□□□ 0.19
VARS-223ENST00000474643 CHADO15335 359 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 RHOBTB3O94955 611 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 CCNE1P24864 410 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 PCSK1P29120 753 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 HOXD13P35453 343 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 RPS9P46781 194 aaKnown RBP16.22■□□□□ 0.19
VARS-223ENST00000474643 UBE2HP62256 183 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 SNRPFP62306 86 aaKnown RBP16.22■□□□□ 0.19
VARS-223ENST00000474643 LRRC32Q14392 662 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 ZNF528Q3MIS6 628 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 ARHGAP29Q52LW3 1261 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 LMBRD2Q68DH5 695 aaPredicted RBP16.22■□□□□ 0.19
VARS-223ENST00000474643 SPATA2LQ8IUW3 424 aaPredicted RBP16.22■□□□□ 0.19
VARS-223ENST00000474643 ADGRF2Q8IZF7 708 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 PDCL2Q8N4E4 241 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 C1orf127Q8N9H9 656 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 KIAA0895Q8NCT3 520 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 GOLGA5Q8TBA6 731 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 MRPS31Q92665 395 aaKnown RBP16.22■□□□□ 0.19
VARS-223ENST00000474643 SMARCE1Q969G3 411 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 TIGD1Q96MW7 591 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 FNBP1Q96RU3 617 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 PI4K2AQ9BTU6 479 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 TASP1Q9H6P5 420 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 C8orf33Q9H7E9 229 aaPredicted RBP16.22■□□□□ 0.19
VARS-223ENST00000474643 KIAA1586Q9HCI6 787 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 TRPV5Q9NQA5 729 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 HSPBP1Q9NZL4 362 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 CGNQ9P2M7 1197 aaKnown RBP16.22■□□□□ 0.19
VARS-223ENST00000474643 NCDNQ9UBB6 729 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 ZMYM5Q9UJ78 669 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 PCDHGA2Q9Y5H1 932 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 TSC2P49815 1807 aa16.22■□□□□ 0.19
VARS-223ENST00000474643 COL4A3Q01955 1670 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 PTPRZ1P23471 2315 aaPredicted RBP16.21■□□□□ 0.19
VARS-223ENST00000474643 NRG2O14511 850 aaPredicted RBP16.21■□□□□ 0.19
VARS-223ENST00000474643 CSH1P0DML2 217 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 CSH2P0DML3 217 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 HAPLN1P10915 354 aaPredicted RBP16.21■□□□□ 0.19
VARS-223ENST00000474643 ATF6P18850 670 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 PTMSP20962 102 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 ACAT1P24752 427 aaKnown RBP16.21■□□□□ 0.19
VARS-223ENST00000474643 LHX1P48742 406 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 RPL10AP62906 217 aaKnown RBP16.21■□□□□ 0.19
VARS-223ENST00000474643 PLCB2Q00722 1185 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 KCNB1Q14721 858 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 DUOXA2Q1HG44 320 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 BMT2Q1RMZ1 405 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 POTEHQ6S545 545 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 GAREM2Q75VX8 874 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 RDH13Q8NBN7 331 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 ZSWIM2Q8NEG5 633 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 TTC8Q8TAM2 541 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 RUBCNQ92622 972 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 CLDN23Q96B33 292 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 MMS19Q96T76 1030 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 IER2Q9BTL4 223 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 LRRC3Q9BY71 257 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 LMAN1LQ9HAT1 526 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 UXTQ9UBK9 157 aaPredicted RBP16.21■□□□□ 0.19
VARS-223ENST00000474643 RAB23Q9ULC3 237 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 L1RE1Q9UN81 338 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 MAPK8IP1Q9UQF2 711 aa16.21■□□□□ 0.19
VARS-223ENST00000474643 SCN1AP35498 2009 aa16.2■□□□□ 0.18
VARS-223ENST00000474643 TGFB1I1O43294 461 aa16.2■□□□□ 0.18
VARS-223ENST00000474643 EXOC3O60645 756 aa16.2■□□□□ 0.18
VARS-223ENST00000474643 DLATP10515 647 aaKnown RBP16.2■□□□□ 0.18
VARS-223ENST00000474643 TNNI1P19237 187 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms