RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 TMX2Q9Y320 296 aa4.08□□□□□ -1.76
ECHDC1-213ENST00000474240 A0A0B4J269 797 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 E9PLN8 166 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 MYO1FO00160 1098 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 PROM1O43490 865 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 TBC1D4O60343 1298 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 UNC5CO95185 931 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 KRT18P05783 430 aaKnown RBP4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 ITGAMP11215 1152 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 NPR1P16066 1061 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 ZFP36P26651 326 aaKnown RBP4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 PEX2P28328 305 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 PPIFP30405 207 aaKnown RBP4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 LRPAP1P30533 357 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 ZEB1P37275 1124 aaPredicted RBP4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 NPTX2P47972 431 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 NXPH1P58417 271 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 TUBB3Q13509 450 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 TP53BP2Q13625 1128 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 GEN1Q17RS7 908 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 ERCC6LQ2NKX8 1250 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 TMPRSS9Q7Z410 1059 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 ADGRG5Q8IZF4 528 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 KRT78Q8N1N4 520 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 FAM156AQ8NDB6 213 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 TMEM125Q96AQ2 219 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 PTCD3Q96EY7 689 aaKnown RBP4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 PGBD1Q96JS3 809 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 VKORC1Q9BQB6 163 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 MLST8Q9BVC4 326 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 C22orf23Q9BZE7 217 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 TOR3AQ9H497 397 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 CASS4Q9NQ75 786 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 AFF4Q9UHB7 1163 aaKnown RBP4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 PACSIN3Q9UKS6 424 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 OGDHLQ9ULD0 1010 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 MAP3K2Q9Y2U5 619 aa4.07□□□□□ -1.76
ECHDC1-213ENST00000474240 MAST3O60307 1309 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 A0A087WWL8 130 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 MBD3L4A6NDZ8 208 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 MBD3L3A6NE82 208 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 BTN3A1O00481 513 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 PLIN1O60240 522 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 DNAJB5O75953 348 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 INMTO95050 263 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 KIF20AO95235 890 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 MYL1P05976 194 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 MYF5P13349 255 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 TRIM27P14373 513 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 BRAFP15056 766 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 HDCP19113 662 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 KLRC1P26715 233 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 PHKA1P46020 1223 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 GCLCP48506 637 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 PXNP49023 591 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 RGS19P49795 217 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 NDUFV1P49821 464 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 SLC13A2Q13183 592 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 MPP3Q13368 585 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 SEMA5AQ13591 1074 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 CNGA2Q16280 664 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 MGAT5BQ3V5L5 792 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 APOA5Q6Q788 366 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 CCAR1Q8IX12 1150 aaKnown RBP4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 B3GALNT2Q8NCR0 500 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 FAM46DQ8NEK8 389 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 SSH3Q8TE77 659 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 SMCR8Q8TEV9 937 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 LINC00476Q8WZB0 136 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 CAVIN3Q969G5 261 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 NMD3Q96D46 503 aaKnown RBP4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 MSLNLQ96KJ4 702 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 ALG8Q9BVK2 526 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 SARGQ9BW04 601 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 WDR11Q9BZH6 1224 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 ZCWPW1Q9H0M4 648 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 ATP6V0A4Q9HBG4 840 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 ZNF287Q9HBT7 754 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 KIAA1586Q9HCI6 787 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 A1CFQ9NQ94 594 aaKnown RBP4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 KCTD5Q9NXV2 234 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 ANKFY1Q9P2R3 1169 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 XPR1Q9UBH6 696 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 STAP2Q9UGK3 403 aa4.06□□□□□ -1.76
ECHDC1-213ENST00000474240 ANO9A1A5B4 782 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 GRID2IPA4D2P6 1211 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 TRIM43BA6NCK2 446 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 UNC119BA6NIH7 251 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 F5H697 171 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 MPPED1O15442 326 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 PEX1O43933 1283 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 LPXNO60711 386 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 NXPH3O95157 252 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 ESRRBO95718 433 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 KITP10721 976 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 CD6P30203 668 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 GNALP38405 381 aa4.05□□□□□ -1.76
ECHDC1-213ENST00000474240 SLC11A2P49281 568 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms