RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 COLGALT1Q8NBJ5 622 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 SPC24Q8NBT2 197 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 APPL2Q8NEU8 664 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 BCL7CQ8WUZ0 217 aaPredicted RBP8.11□□□□□ -1.11
CCDC93-207ENST00000474006 SCG3Q8WXD2 468 aaKnown RBP8.11□□□□□ -1.11
CCDC93-207ENST00000474006 IGSF21Q96ID5 467 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 FAXDC2Q96IV6 333 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 SUSD3Q96L08 255 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 FAM81BQ96LP2 452 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 ZNF560Q96MR9 790 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 ZNF558Q96NG5 402 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 GPR62Q9BZJ7 368 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 EDEM3Q9BZQ6 932 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 NIF3L1Q9GZT8 377 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 SDCBP2Q9H190 292 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 CYP3A43Q9HB55 503 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 AAASQ9NRG9 546 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 MARCH5Q9NX47 278 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 SPG21Q9NZD8 308 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 SCHIP1Q9P0W5 487 aaPredicted RBP8.11□□□□□ -1.11
CCDC93-207ENST00000474006 FBXL5Q9UKA1 691 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 AJAP1Q9UKB5 411 aaPredicted RBP8.11□□□□□ -1.11
CCDC93-207ENST00000474006 ADAM28Q9UKQ2 775 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 CAPN11Q9UMQ6 739 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 LUC7L2Q9Y383 392 aaKnown RBP8.11□□□□□ -1.11
CCDC93-207ENST00000474006 PCDHB12Q9Y5F1 795 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 PCDHA11Q9Y5I1 949 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 TIMM13Q9Y5L4 95 aaPredicted RBP8.11□□□□□ -1.11
CCDC93-207ENST00000474006 HRH3Q9Y5N1 445 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 FHOD1Q9Y613 1164 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 MYH11P35749 1972 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 SIP14410 1827 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 A0A1W2PQJ5 194 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 LINC01553A4QN01 128 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 A6NJY4 79 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 M0QZQ0 153 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 TACC1O75410 805 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 IL2RAP01589 272 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 GYPCP04921 128 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 FAM163BP0C2L3 166 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 LINC00271P0C7V0 271 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 LAG3P18627 525 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 ACO1P21399 889 aaKnown RBP8.1□□□□□ -1.11
CCDC93-207ENST00000474006 TBXAS1P24557 533 aaPredicted RBP8.1□□□□□ -1.11
CCDC93-207ENST00000474006 LMO2P25791 158 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 USP8P40818 1118 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 RAP1GAPP47736 663 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 FXR1P51114 621 aaKnown RBP eCLIP8.1□□□□□ -1.11
CCDC93-207ENST00000474006 ADKP55263 362 aaKnown RBP8.1□□□□□ -1.11
CCDC93-207ENST00000474006 PRR20EP86478 221 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 PRR20CP86479 221 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 PRR20DP86480 221 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 PRR20BP86481 221 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 PRR20AP86496 221 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 GOLGA8FQ08AF8 430 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 GOLGA8DPQ0D2H9 430 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 CLN3Q13286 438 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 RAPGEF1Q13905 1077 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 FAM171A1Q5VUB5 890 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 SCARA5Q6ZMJ2 495 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 CYP4X1Q8N118 509 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 SLC39A11Q8N1S5 342 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 PDCL2Q8N4E4 241 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 TOP6BLQ8N6T0 577 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 KDF1Q8NAX2 398 aaPredicted RBP8.1□□□□□ -1.11
CCDC93-207ENST00000474006 ZNF397Q8NF99 534 aaPredicted RBP8.1□□□□□ -1.11
CCDC93-207ENST00000474006 WHAMMQ8TF30 809 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 JAKMIP2Q96AA8 810 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 IQCDQ96DY2 449 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 MRPL45Q9BRJ2 306 aaKnown RBP8.1□□□□□ -1.11
CCDC93-207ENST00000474006 PBX4Q9BYU1 374 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 BCO2Q9BYV7 579 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 TTYH3Q9C0H2 523 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 GPR88Q9GZN0 384 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 TSPAN10Q9H1Z9 355 aaPredicted RBP8.1□□□□□ -1.11
CCDC93-207ENST00000474006 PRO3102Q9H379 93 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 SNX25Q9H3E2 840 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 SMYD3Q9H7B4 428 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 CISHQ9NSE2 258 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 TOR4AQ9NXH8 423 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 CEP72Q9P209 647 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 IMPACTQ9P2X3 320 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 MSRAQ9UJ68 235 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 L1RE1Q9UN81 338 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 YBX2Q9Y2T7 364 aaKnown RBP8.1□□□□□ -1.11
CCDC93-207ENST00000474006 DAAM1Q9Y4D1 1078 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 PCDHB4Q9Y5E5 795 aa8.1□□□□□ -1.11
CCDC93-207ENST00000474006 TET1Q8NFU7 2136 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 SCN5AQ14524 2016 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 TTC24A2A3L6 582 aaPredicted RBP8.09□□□□□ -1.11
CCDC93-207ENST00000474006 AKR1B15C9JRZ8 316 aaPredicted RBP8.09□□□□□ -1.11
CCDC93-207ENST00000474006 GABRDO14764 452 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 CYP26A1O43174 497 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 ICMTO60725 284 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 FGF18O76093 207 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 ARHGEF15O94989 841 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 EFEMP2O95967 443 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 CYP11A1P05108 521 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 CA3P07451 260 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 TPM1P09493 284 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms