RNA–Protein interactions for RNA: ENST00000473797.1

GPCPD1-204, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-204ENST00000473797 ICE2Q659A1 982 aa4.78□□□□□ -1.64
GPCPD1-204ENST00000473797 SLC29A4Q7RTT9 530 aa4.78□□□□□ -1.64
GPCPD1-204ENST00000473797 ZBTB9Q96C00 473 aa4.78□□□□□ -1.64
GPCPD1-204ENST00000473797 CCDC8Q9H0W5 538 aaPredicted RBP4.78□□□□□ -1.64
GPCPD1-204ENST00000473797 NRIP3Q9NQ35 241 aa4.78□□□□□ -1.64
GPCPD1-204ENST00000473797 PCDHA3Q9Y5H8 950 aa4.78□□□□□ -1.64
GPCPD1-204ENST00000473797 VPS4BO75351 444 aa4.77□□□□□ -1.65
GPCPD1-204ENST00000473797 IGKV2-30P06310 120 aa4.77□□□□□ -1.65
GPCPD1-204ENST00000473797 CDK11BP21127 795 aaKnown RBP4.77□□□□□ -1.65
GPCPD1-204ENST00000473797 ITKQ08881 620 aa4.77□□□□□ -1.65
GPCPD1-204ENST00000473797 NOGQ13253 232 aa4.77□□□□□ -1.65
GPCPD1-204ENST00000473797 ETFDHQ16134 617 aa4.77□□□□□ -1.65
GPCPD1-204ENST00000473797 CEP78Q5JTW2 689 aa4.77□□□□□ -1.65
GPCPD1-204ENST00000473797 EMC10Q5UCC4 262 aa4.77□□□□□ -1.65
GPCPD1-204ENST00000473797 PRAMEF17Q5VTA0 474 aa4.77□□□□□ -1.65
GPCPD1-204ENST00000473797 SLC9A4Q6AI14 798 aa4.77□□□□□ -1.65
GPCPD1-204ENST00000473797 SLC18B1Q6NT16 456 aa4.77□□□□□ -1.65
GPCPD1-204ENST00000473797 YTHDF3Q7Z739 585 aaKnown RBP4.77□□□□□ -1.65
GPCPD1-204ENST00000473797 FANCBQ8NB91 859 aa4.77□□□□□ -1.65
GPCPD1-204ENST00000473797 FAM167AQ96KS9 214 aa4.77□□□□□ -1.65
GPCPD1-204ENST00000473797 QTRT1Q9BXR0 403 aaKnown RBP4.77□□□□□ -1.65
GPCPD1-204ENST00000473797 TNKSO95271 1327 aa4.76□□□□□ -1.65
GPCPD1-204ENST00000473797 BMP15O95972 392 aa4.76□□□□□ -1.65
GPCPD1-204ENST00000473797 IL6RP08887 468 aaPredicted RBP4.76□□□□□ -1.65
GPCPD1-204ENST00000473797 CHRM3P20309 590 aa4.76□□□□□ -1.65
GPCPD1-204ENST00000473797 PDCP20941 246 aa4.76□□□□□ -1.65
GPCPD1-204ENST00000473797 SFPQP23246 707 aaKnown RBP eCLIP4.76□□□□□ -1.65
GPCPD1-204ENST00000473797 PHKA1P46020 1223 aa4.76□□□□□ -1.65
GPCPD1-204ENST00000473797 EEFSECP57772 596 aaKnown RBP4.76□□□□□ -1.65
GPCPD1-204ENST00000473797 TMEM108Q6UXF1 575 aa4.76□□□□□ -1.65
GPCPD1-204ENST00000473797 CATSPERGQ6ZRH7 1159 aa4.76□□□□□ -1.65
GPCPD1-204ENST00000473797 MAVSQ7Z434 540 aa4.76□□□□□ -1.65
GPCPD1-204ENST00000473797 HEATR3Q7Z4Q2 680 aa4.76□□□□□ -1.65
GPCPD1-204ENST00000473797 PNMA8AQ86V59 439 aaPredicted RBP4.76□□□□□ -1.65
GPCPD1-204ENST00000473797 MIER2Q8N344 545 aa4.76□□□□□ -1.65
GPCPD1-204ENST00000473797 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.76□□□□□ -1.65
GPCPD1-204ENST00000473797 TMEM79Q9BSE2 394 aa4.76□□□□□ -1.65
GPCPD1-204ENST00000473797 DUSP22Q9NRW4 184 aa4.76□□□□□ -1.65
GPCPD1-204ENST00000473797 SH3BP4Q9P0V3 963 aa4.76□□□□□ -1.65
GPCPD1-204ENST00000473797 SSX2IPQ9Y2D8 614 aa4.76□□□□□ -1.65
GPCPD1-204ENST00000473797 SPEF1Q9Y4P9 236 aa4.76□□□□□ -1.65
GPCPD1-204ENST00000473797 ZNF521Q96K83 1311 aa4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 CYP2D7A0A087X1C5 515 aa4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 ALG1L2C9J202 215 aa4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 IKBKBO14920 756 aa4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 TJP3O95049 919 aa4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 TOP3BO95985 862 aaKnown RBP4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 GNAI2P04899 355 aa4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 PDHA1P08559 390 aa4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 PIM1P11309 404 aaPredicted RBP4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 MPGP29372 298 aa4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 PPIFP30405 207 aaKnown RBP4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 CYP2C18P33260 490 aa4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 LIPAP38571 399 aa4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 ZNF134P52741 427 aa4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 HOXA4Q00056 320 aaPredicted RBP4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 LAMB3Q13751 1172 aa4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 SUPT20HL1Q3ZLR7 823 aa4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 GALNT16Q8N428 558 aa4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 RP9Q8TA86 221 aaKnown RBP4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 DENND1AQ8TEH3 1009 aa4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 TNPO1Q92973 898 aaKnown RBP4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 FSD1LQ9BXM9 530 aa4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 SLAMF7Q9NQ25 335 aa4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 HESX1Q9UBX0 185 aa4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 ABCF2Q9UG63 623 aa4.75□□□□□ -1.65
GPCPD1-204ENST00000473797 QSOX1O00391 747 aa4.74□□□□□ -1.65
GPCPD1-204ENST00000473797 PPEF2O14830 753 aa4.74□□□□□ -1.65
GPCPD1-204ENST00000473797 DCLK1O15075 740 aa4.74□□□□□ -1.65
GPCPD1-204ENST00000473797 KATNA1O75449 491 aa4.74□□□□□ -1.65
GPCPD1-204ENST00000473797 ATXN1LP0C7T5 689 aaKnown RBP4.74□□□□□ -1.65
GPCPD1-204ENST00000473797 CYP2D6P10635 497 aa4.74□□□□□ -1.65
GPCPD1-204ENST00000473797 TYRP14679 529 aa4.74□□□□□ -1.65
GPCPD1-204ENST00000473797 CDKN1CP49918 316 aaPredicted RBP4.74□□□□□ -1.65
GPCPD1-204ENST00000473797 DAZAP2Q15038 168 aaPredicted RBP4.74□□□□□ -1.65
GPCPD1-204ENST00000473797 PTPN21Q16825 1174 aa4.74□□□□□ -1.65
GPCPD1-204ENST00000473797 TREML2Q5T2D2 321 aa4.74□□□□□ -1.65
GPCPD1-204ENST00000473797 USP45Q70EL2 814 aa4.74□□□□□ -1.65
GPCPD1-204ENST00000473797 PPP1R3BQ86XI6 285 aa4.74□□□□□ -1.65
GPCPD1-204ENST00000473797 C8orf58Q8NAV2 365 aa4.74□□□□□ -1.65
GPCPD1-204ENST00000473797 RGMAQ96B86 450 aa4.74□□□□□ -1.65
GPCPD1-204ENST00000473797 PUS7Q96PZ0 661 aaKnown RBP4.74□□□□□ -1.65
GPCPD1-204ENST00000473797 PTDSS2Q9BVG9 487 aa4.74□□□□□ -1.65
GPCPD1-204ENST00000473797 PRSS22Q9GZN4 317 aa4.74□□□□□ -1.65
GPCPD1-204ENST00000473797 FEZ2Q9UHY8 353 aaPredicted RBP4.74□□□□□ -1.65
GPCPD1-204ENST00000473797 TBC1D30Q9Y2I9 924 aa4.74□□□□□ -1.65
GPCPD1-204ENST00000473797 M0QYG6 137 aa4.73□□□□□ -1.65
GPCPD1-204ENST00000473797 ERC2O15083 957 aa4.73□□□□□ -1.65
GPCPD1-204ENST00000473797 DNAJB5O75953 348 aa4.73□□□□□ -1.65
GPCPD1-204ENST00000473797 POU2F2P09086 479 aa4.73□□□□□ -1.65
GPCPD1-204ENST00000473797 FOXG1P55316 489 aaPredicted RBP4.73□□□□□ -1.65
GPCPD1-204ENST00000473797 LOXL3P58215 753 aa4.73□□□□□ -1.65
GPCPD1-204ENST00000473797 LONRF3Q496Y0 759 aa4.73□□□□□ -1.65
GPCPD1-204ENST00000473797 PCID2Q5JVF3 399 aa4.73□□□□□ -1.65
GPCPD1-204ENST00000473797 MTHFD1LQ6UB35 978 aa4.73□□□□□ -1.65
GPCPD1-204ENST00000473797 PARS2Q7L3T8 475 aaKnown RBP4.73□□□□□ -1.65
GPCPD1-204ENST00000473797 CHSY1Q86X52 802 aa4.73□□□□□ -1.65
GPCPD1-204ENST00000473797 KRT73Q86Y46 540 aa4.73□□□□□ -1.65
GPCPD1-204ENST00000473797 CPA6Q8N4T0 437 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms