RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CHN1P15882 459 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 GM2AP17900 193 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 TUFMP49411 452 aaKnown RBP5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 ZNF143P52747 638 aaPredicted RBP5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 PFKPQ01813 784 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 SPAG1Q07617 926 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 ACVR2BQ13705 512 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 WTAPQ15007 396 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 RASA2Q15283 850 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 KRT71Q3SY84 523 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 ZC2HC1CQ53FD0 456 aaPredicted RBP5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 CDKAL1Q5VV42 579 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 FYB2Q5VWT5 728 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 ANKRD34AQ69YU3 496 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 NXNQ6DKJ4 435 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 FDX2Q6P4F2 183 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 PDXDC1Q6P996 788 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 TTC23LQ6PF05 361 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 TMTC3Q6ZXV5 915 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 SUPT20HQ8NEM7 779 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 CASKIN2Q8WXE0 1202 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 NUP88Q99567 741 aaPredicted RBP5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 ISCUQ9H1K1 167 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 PLGRKTQ9HBL7 147 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 AASDHPPTQ9NRN7 309 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 INTS9Q9NV88 658 aaKnown RBP5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 GID8Q9NWU2 228 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 UMODL1Q5DID0 1318 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 ARHGEF10O15013 1369 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 ARFGEF2Q9Y6D5 1785 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 ARHGAP10A1A4S6 786 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 KIF28PB7ZC32 967 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 C9IYK1 514 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 PPP6R2O75170 966 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 EYA4O95677 639 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 UBTFL6P0CB48 400 aaPredicted RBP5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 HMOX2P30519 316 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 SLC16A2P36021 539 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 PIP4K2AP48426 406 aaPredicted RBP5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 KIF11P52732 1056 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 RPL26P61254 145 aaKnown RBP5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 MORC3Q14149 939 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 LPIN1Q14693 890 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 MYLK3Q32MK0 819 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 ANO1Q5XXA6 986 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 SIGIRRQ6IA17 410 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 C1orf228Q6PIY5 440 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 SMYD4Q8IYR2 804 aaPredicted RBP5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 LRRC47Q8N1G4 583 aaKnown RBP5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 ARHGAP24Q8N264 748 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 DCLK2Q8N568 766 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 SLC17A8Q8NDX2 589 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 PYROXD1Q8WU10 500 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 PPP1R13LQ8WUF5 828 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 DPF3Q92784 378 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 NMD3Q96D46 503 aaKnown RBP5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 PGM2Q96G03 612 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 STK33Q9BYT3 514 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 FOXQ1Q9C009 403 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 STMN4Q9H169 189 aaPredicted RBP5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 TLE6Q9H808 572 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 VTA1Q9NP79 307 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 RBM12Q9NTZ6 932 aaKnown RBP5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 IL20Q9NYY1 176 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 AIPL1Q9NZN9 384 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 MAN1B1Q9UKM7 699 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 MKL2Q9ULH7 1088 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 STX8Q9UNK0 236 aa5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 FAF1Q9UNN5 650 aaPredicted RBP5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 TDRKHQ9Y2W6 561 aaKnown RBP5.42□□□□□ -1.54
TMEM39A-206ENST00000473684 DLEC1Q9Y238 1755 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 PTPDC1A2A3K4 754 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 NOTOA8MTQ0 251 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 PIK3R2O00459 728 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 ADAM23O75077 832 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 ZNF12P17014 697 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 LTKP29376 864 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 BASP1P80723 227 aaKnown RBP5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 TRIM29Q14134 588 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 GIT2Q14161 759 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 SLC39A14Q15043 492 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 UAP1Q16222 522 aaPredicted RBP5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 TMEM67Q5HYA8 995 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 SYNPOQ8N3V7 929 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 CRACR2BQ8N4Y2 399 aaPredicted RBP5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 FITM2Q8N6M3 262 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 ZBTB38Q8NAP3 1195 aaPredicted RBP5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 C8orf58Q8NAV2 365 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 ZSWIM2Q8NEG5 633 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 OR7G1Q8NGA0 311 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 CEP70Q8NHQ1 597 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 EME1Q96AY2 570 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 CCDC127Q96BQ5 260 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 GRAMD1AQ96CP6 724 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 C8orf48Q96LL4 319 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 CRNKL1Q9BZJ0 848 aaKnown RBP5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 SPC25Q9HBM1 224 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 KLHL14Q9P2G3 628 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 STX18Q9P2W9 335 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms