RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 PSMC1P62191 440 aaKnown RBP17.91■□□□□ 0.46
USP40-212ENST00000473191 TNK2Q07912 1038 aa17.91■□□□□ 0.46
USP40-212ENST00000473191 FCHO2Q0JRZ9 810 aa17.91■□□□□ 0.46
USP40-212ENST00000473191 TXNDC11Q6PKC3 985 aa17.91■□□□□ 0.46
USP40-212ENST00000473191 ITIH5Q86UX2 942 aa17.91■□□□□ 0.46
USP40-212ENST00000473191 DCP1BQ8IZD4 617 aaKnown RBP17.91■□□□□ 0.46
USP40-212ENST00000473191 ADGRF2Q8IZF7 708 aa17.91■□□□□ 0.46
USP40-212ENST00000473191 PLEKHO2Q8TD55 490 aa17.91■□□□□ 0.46
USP40-212ENST00000473191 FAM3CQ92520 227 aa17.91■□□□□ 0.46
USP40-212ENST00000473191 ZNF516Q92618 1163 aa17.91■□□□□ 0.46
USP40-212ENST00000473191 ELMO3Q96BJ8 720 aa17.91■□□□□ 0.46
USP40-212ENST00000473191 ANKRD36BP1Q96IX9 119 aa17.91■□□□□ 0.46
USP40-212ENST00000473191 ACBD6Q9BR61 282 aa17.91■□□□□ 0.46
USP40-212ENST00000473191 LRRC27Q9C0I9 530 aa17.91■□□□□ 0.46
USP40-212ENST00000473191 GPR88Q9GZN0 384 aa17.91■□□□□ 0.46
USP40-212ENST00000473191 GTSE1Q9NYZ3 720 aa17.91■□□□□ 0.46
USP40-212ENST00000473191 MAGED2Q9UNF1 606 aaPredicted RBP17.91■□□□□ 0.46
USP40-212ENST00000473191 CCL26Q9Y258 94 aa17.91■□□□□ 0.46
USP40-212ENST00000473191 ZFHX2Q9C0A1 2572 aaPredicted RBP17.91■□□□□ 0.46
USP40-212ENST00000473191 FANCMQ8IYD8 2048 aa17.91■□□□□ 0.46
USP40-212ENST00000473191 KIF26AQ9ULI4 1882 aaPredicted RBP17.9■□□□□ 0.46
USP40-212ENST00000473191 DENND4CQ5VZ89 1909 aa17.9■□□□□ 0.46
USP40-212ENST00000473191 A0A1B0GVL5 298 aa17.9■□□□□ 0.46
USP40-212ENST00000473191 F11P03951 625 aa17.9■□□□□ 0.46
USP40-212ENST00000473191 DLATP10515 647 aaKnown RBP17.9■□□□□ 0.46
USP40-212ENST00000473191 HOXC13P31276 330 aa17.9■□□□□ 0.46
USP40-212ENST00000473191 CASP4P49662 377 aa17.9■□□□□ 0.46
USP40-212ENST00000473191 NLRP12P59046 1061 aa17.9■□□□□ 0.46
USP40-212ENST00000473191 CSTF1Q05048 431 aaKnown RBP17.9■□□□□ 0.46
USP40-212ENST00000473191 MTAPQ13126 283 aa17.9■□□□□ 0.46
USP40-212ENST00000473191 GAS6Q14393 721 aa17.9■□□□□ 0.46
USP40-212ENST00000473191 VEPH1Q14D04 833 aa17.9■□□□□ 0.46
USP40-212ENST00000473191 SNRNP35Q16560 246 aaKnown RBP17.9■□□□□ 0.46
USP40-212ENST00000473191 STXBP4Q6ZWJ1 553 aa17.9■□□□□ 0.46
USP40-212ENST00000473191 TRAPPC11Q7Z392 1133 aa17.9■□□□□ 0.46
USP40-212ENST00000473191 LIMS2Q7Z4I7 341 aa17.9■□□□□ 0.46
USP40-212ENST00000473191 TOP6BLQ8N6T0 577 aa17.9■□□□□ 0.46
USP40-212ENST00000473191 KIAA0895Q8NCT3 520 aa17.9■□□□□ 0.46
USP40-212ENST00000473191 C2orf15Q8WU43 125 aaKnown RBP17.9■□□□□ 0.46
USP40-212ENST00000473191 CCDC127Q96BQ5 260 aa17.9■□□□□ 0.46
USP40-212ENST00000473191 PAGE5Q96GU1 130 aa17.9■□□□□ 0.46
USP40-212ENST00000473191 HPDLQ96IR7 371 aa17.9■□□□□ 0.46
USP40-212ENST00000473191 TASP1Q9H6P5 420 aa17.9■□□□□ 0.46
USP40-212ENST00000473191 TRPV5Q9NQA5 729 aa17.9■□□□□ 0.46
USP40-212ENST00000473191 FAM13BQ9NYF5 915 aa17.9■□□□□ 0.46
USP40-212ENST00000473191 KIAA0391O15091 583 aaKnown RBP17.89■□□□□ 0.45
USP40-212ENST00000473191 LAMTOR5O43504 91 aa17.89■□□□□ 0.45
USP40-212ENST00000473191 TSPY1Q01534 308 aa17.89■□□□□ 0.45
USP40-212ENST00000473191 CYP24A1Q07973 514 aa17.89■□□□□ 0.45
USP40-212ENST00000473191 STK4Q13043 487 aa17.89■□□□□ 0.45
USP40-212ENST00000473191 BMT2Q1RMZ1 405 aa17.89■□□□□ 0.45
USP40-212ENST00000473191 TXNDC8Q6A555 127 aa17.89■□□□□ 0.45
USP40-212ENST00000473191 WDR49Q8IV35 697 aa17.89■□□□□ 0.45
USP40-212ENST00000473191 MAB21L3Q8N8X9 362 aa17.89■□□□□ 0.45
USP40-212ENST00000473191 LEO1Q8WVC0 666 aaPredicted RBP17.89■□□□□ 0.45
USP40-212ENST00000473191 MRPL45Q9BRJ2 306 aaKnown RBP17.89■□□□□ 0.45
USP40-212ENST00000473191 CRTAC1Q9NQ79 661 aa17.89■□□□□ 0.45
USP40-212ENST00000473191 RBM12Q9NTZ6 932 aaKnown RBP17.89■□□□□ 0.45
USP40-212ENST00000473191 CHADO15335 359 aa17.88■□□□□ 0.45
USP40-212ENST00000473191 TNNC2P02585 160 aa17.88■□□□□ 0.45
USP40-212ENST00000473191 PDGFRBP09619 1106 aa17.88■□□□□ 0.45
USP40-212ENST00000473191 PRR29P0C7W0 189 aa17.88■□□□□ 0.45
USP40-212ENST00000473191 CHRNB1P11230 501 aa17.88■□□□□ 0.45
USP40-212ENST00000473191 PFKFB1P16118 471 aa17.88■□□□□ 0.45
USP40-212ENST00000473191 MYL7Q01449 175 aa17.88■□□□□ 0.45
USP40-212ENST00000473191 SMARCB1Q12824 385 aa17.88■□□□□ 0.45
USP40-212ENST00000473191 TAF12Q16514 161 aa17.88■□□□□ 0.45
USP40-212ENST00000473191 DUOXA2Q1HG44 320 aa17.88■□□□□ 0.45
USP40-212ENST00000473191 FAM171BQ6P995 826 aa17.88■□□□□ 0.45
USP40-212ENST00000473191 YAF2Q8IY57 180 aa17.88■□□□□ 0.45
USP40-212ENST00000473191 TMEM86AQ8N2M4 240 aa17.88■□□□□ 0.45
USP40-212ENST00000473191 NELL2Q99435 816 aa17.88■□□□□ 0.45
USP40-212ENST00000473191 LMAN1LQ9HAT1 526 aa17.88■□□□□ 0.45
USP40-212ENST00000473191 MAGEF1Q9HAY2 307 aa17.88■□□□□ 0.45
USP40-212ENST00000473191 C2orf42Q9NWW7 574 aa17.88■□□□□ 0.45
USP40-212ENST00000473191 CFAP45Q9UL16 551 aa17.88■□□□□ 0.45
USP40-212ENST00000473191 PVALEFA0A1B0GWK0 134 aa17.87■□□□□ 0.45
USP40-212ENST00000473191 OTOL1A6NHN0 477 aaPredicted RBP17.87■□□□□ 0.45
USP40-212ENST00000473191 TNNI1P19237 187 aa17.87■□□□□ 0.45
USP40-212ENST00000473191 CDC25CP30307 473 aa17.87■□□□□ 0.45
USP40-212ENST00000473191 RPS9P46781 194 aaKnown RBP17.87■□□□□ 0.45
USP40-212ENST00000473191 PSMD6Q15008 389 aa17.87■□□□□ 0.45
USP40-212ENST00000473191 NFE2Q16621 373 aaPredicted RBP17.87■□□□□ 0.45
USP40-212ENST00000473191 KNOP1Q1ED39 458 aaKnown RBP17.87■□□□□ 0.45
USP40-212ENST00000473191 KMT5BQ4FZB7 885 aa17.87■□□□□ 0.45
USP40-212ENST00000473191 ARHGAP15Q53QZ3 475 aa17.87■□□□□ 0.45
USP40-212ENST00000473191 TRIM68Q6AZZ1 485 aa17.87■□□□□ 0.45
USP40-212ENST00000473191 ATL3Q6DD88 541 aa17.87■□□□□ 0.45
USP40-212ENST00000473191 CMTM8Q8IZV2 173 aa17.87■□□□□ 0.45
USP40-212ENST00000473191 DCLK2Q8N568 766 aa17.87■□□□□ 0.45
USP40-212ENST00000473191 XXYLT1Q8NBI6 393 aa17.87■□□□□ 0.45
USP40-212ENST00000473191 BPIFB1Q8TDL5 484 aa17.87■□□□□ 0.45
USP40-212ENST00000473191 USP13Q92995 863 aaPredicted RBP17.87■□□□□ 0.45
USP40-212ENST00000473191 MYLPFQ96A32 169 aa17.87■□□□□ 0.45
USP40-212ENST00000473191 E2F7Q96AV8 911 aa17.87■□□□□ 0.45
USP40-212ENST00000473191 CHFRQ96EP1 664 aa17.87■□□□□ 0.45
USP40-212ENST00000473191 SLC22A12Q96S37 553 aa17.87■□□□□ 0.45
USP40-212ENST00000473191 CGRRF1Q99675 332 aa17.87■□□□□ 0.45
USP40-212ENST00000473191 DPEP3Q9H4B8 488 aa17.87■□□□□ 0.45
USP40-212ENST00000473191 HPSEQ9Y251 543 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms