RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 PPARGP37231 505 aaPredicted RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 C21orf59P57076 290 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 CD300CQ08708 224 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 IFIT5Q13325 482 aaKnown RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 MSLNQ13421 630 aaPredicted RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 GRM2Q14416 872 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 NONOQ15233 471 aaKnown RBP eCLIP4.43□□□□□ -1.7
VPS50-210ENST00000471188 TLR1Q15399 786 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 ARHGAP44Q17R89 818 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 ZNF423Q2M1K9 1284 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 DNAL1Q4LDG9 190 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 HERC4Q5GLZ8 1057 aaPredicted RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 EFHC1Q5JVL4 640 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 FAM26FQ5R3K3 315 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 UGT2A3Q6UWM9 527 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 GSTA5Q7RTV2 222 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 PRPF39Q86UA1 669 aaKnown RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 NLRX1Q86UT6 975 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 TRABD2AQ86V40 505 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 PASD1Q8IV76 773 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 TRIM59Q8IWR1 403 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 C4orf32Q8N8J7 132 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 DDI1Q8WTU0 396 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 ATG4AQ8WYN0 398 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 ARHGEF26Q96DR7 871 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 SNF8Q96H20 258 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 ZNF496Q96IT1 587 aaPredicted RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 UIMC1Q96RL1 719 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 SETDB2Q96T68 719 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 FAM118BQ9BPY3 351 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 MRPS26Q9BYN8 205 aaKnown RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 OSBPL6Q9BZF3 934 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 SHCBP1LQ9BZQ2 653 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 KLHL25Q9H0H3 589 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 GBA3Q9H227 469 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 GANQ9H2C0 597 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 NRDE2Q9H7Z3 1164 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 MANSC1Q9H8J5 431 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 SAYSD1Q9NPB0 183 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 AAASQ9NRG9 546 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 MARCOQ9UEW3 520 aaPredicted RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 VPS51Q9UID3 782 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 ADAMTS6Q9UKP5 1117 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 INPP5FQ9Y2H2 1132 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 NOX1Q9Y5S8 564 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 METP08581 1390 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 CYP2D7A0A087X1C5 515 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 A0A0A6YYK5 440 aaPredicted RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 FAM237BA0A1B0GVD1 139 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 PLEKHG3A1L390 1219 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 MAGEB2O15479 319 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 CLDN3O15551 220 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 BUD23O43709 281 aaKnown RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 PEX1O43933 1283 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 MAGEC1O60732 1142 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 DGAT1O75907 488 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 CAMTA2O94983 1202 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 LDHCP07864 332 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 ZBTB48P10074 688 aaPredicted RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 XRCC5P13010 732 aaKnown RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 GYS1P13807 737 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 NELFEP18615 380 aaKnown RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 CDH2P19022 906 aaPredicted RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 ITIH2P19823 946 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 RCVRNP35243 200 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 FDFT1P37268 417 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 PHKA1P46020 1223 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 ACADVLP49748 655 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 RAP1GDS1P52306 607 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 NR1H2P55055 460 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 ARL4CP56559 192 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 NUP107P57740 925 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 SLC25A3Q00325 362 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 PDK1Q15118 436 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 AMHR2Q16671 573 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 DCAF6Q58WW2 860 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 TCHHL1Q5QJ38 904 aaPredicted RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 TMEM63BQ5T3F8 832 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 ZFYVE27Q5T4F4 411 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 DEPDC1Q5TB30 811 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 EGFLAMQ63HQ2 1017 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 TMC7Q7Z402 723 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 ZNF410Q86VK4 478 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 ERI1Q8IV48 349 aaKnown RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 SEPT12Q8IYM1 358 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 CENPSQ8N2Z9 138 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 LCORLQ8N3X6 602 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 HELBQ8NG08 1087 aaPredicted RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 PRR7Q8TB68 274 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 PYROXD1Q8WU10 500 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 OXNAD1Q96HP4 312 aaPredicted RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 NUF2Q9BZD4 464 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 KIAA1586Q9HCI6 787 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 GCNT4Q9P109 453 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 LRP2BPQ9P2M1 347 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 PCDHGB4Q9UN71 923 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 PCDHGB5Q9Y5G0 923 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 TNRQ92752 1358 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 RGPD1P0DJD0 1748 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 A0A1W2PQ67 120 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms