RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 ZIM2Q9NZV7 527 aa6.34□□□□□ -1.39
PRPF40A-206ENST00000471167 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.34□□□□□ -1.39
PRPF40A-206ENST00000471167 COL3A1P02461 1466 aaPredicted RBP6.34□□□□□ -1.4
PRPF40A-206ENST00000471167 H3BML4 177 aa6.33□□□□□ -1.4
PRPF40A-206ENST00000471167 TRIAP1O43715 76 aa6.33□□□□□ -1.4
PRPF40A-206ENST00000471167 NR2F6P10588 404 aa6.33□□□□□ -1.4
PRPF40A-206ENST00000471167 HTR1BP28222 390 aa6.33□□□□□ -1.4
PRPF40A-206ENST00000471167 FOXF2Q12947 444 aa6.33□□□□□ -1.4
PRPF40A-206ENST00000471167 KHDC1LQ5JSQ8 128 aa6.33□□□□□ -1.4
PRPF40A-206ENST00000471167 TSTD2Q5T7W7 516 aa6.33□□□□□ -1.4
PRPF40A-206ENST00000471167 SWSAP1Q6NVH7 229 aa6.33□□□□□ -1.4
PRPF40A-206ENST00000471167 OVCH2Q7RTZ1 564 aa6.33□□□□□ -1.4
PRPF40A-206ENST00000471167 MAVSQ7Z434 540 aa6.33□□□□□ -1.4
PRPF40A-206ENST00000471167 DPF1Q92782 380 aa6.33□□□□□ -1.4
PRPF40A-206ENST00000471167 SARAFQ96BY9 339 aa6.33□□□□□ -1.4
PRPF40A-206ENST00000471167 FAM136AQ96C01 138 aa6.33□□□□□ -1.4
PRPF40A-206ENST00000471167 PBKQ96KB5 322 aa6.33□□□□□ -1.4
PRPF40A-206ENST00000471167 CAMKK2Q96RR4 588 aa6.33□□□□□ -1.4
PRPF40A-206ENST00000471167 P2RX7Q99572 595 aaKnown RBP6.33□□□□□ -1.4
PRPF40A-206ENST00000471167 SPATA5L1Q9BVQ7 753 aa6.33□□□□□ -1.4
PRPF40A-206ENST00000471167 SERTAD4Q9NUC0 356 aa6.33□□□□□ -1.4
PRPF40A-206ENST00000471167 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.33□□□□□ -1.4
PRPF40A-206ENST00000471167 SETD1BQ9UPS6 1966 aaKnown RBP6.33□□□□□ -1.4
PRPF40A-206ENST00000471167 CCDC151A5D8V7 595 aa6.32□□□□□ -1.4
PRPF40A-206ENST00000471167 PROP1O75360 226 aa6.32□□□□□ -1.4
PRPF40A-206ENST00000471167 NPR1P16066 1061 aa6.32□□□□□ -1.4
PRPF40A-206ENST00000471167 ITGALP20701 1170 aa6.32□□□□□ -1.4
PRPF40A-206ENST00000471167 CD6P30203 668 aa6.32□□□□□ -1.4
PRPF40A-206ENST00000471167 TFF2Q03403 129 aa6.32□□□□□ -1.4
PRPF40A-206ENST00000471167 PLEKHG6Q3KR16 790 aa6.32□□□□□ -1.4
PRPF40A-206ENST00000471167 ZIK1Q3SY52 487 aaPredicted RBP6.32□□□□□ -1.4
PRPF40A-206ENST00000471167 ZNF788Q6ZQV5 615 aa6.32□□□□□ -1.4
PRPF40A-206ENST00000471167 RASAL3Q86YV0 1011 aa6.32□□□□□ -1.4
PRPF40A-206ENST00000471167 BRIX1Q8TDN6 353 aaKnown RBP6.32□□□□□ -1.4
PRPF40A-206ENST00000471167 DDX17Q92841 729 aaKnown RBP6.32□□□□□ -1.4
PRPF40A-206ENST00000471167 FKBP10Q96AY3 582 aa6.32□□□□□ -1.4
PRPF40A-206ENST00000471167 RUNDC1Q96C34 613 aa6.32□□□□□ -1.4
PRPF40A-206ENST00000471167 TTYH3Q9C0H2 523 aa6.32□□□□□ -1.4
PRPF40A-206ENST00000471167 CPNE5Q9HCH3 593 aa6.32□□□□□ -1.4
PRPF40A-206ENST00000471167 CPA4Q9UI42 421 aa6.32□□□□□ -1.4
PRPF40A-206ENST00000471167 MED16Q9Y2X0 877 aa6.32□□□□□ -1.4
PRPF40A-206ENST00000471167 ZNF213O14771 459 aa6.31□□□□□ -1.4
PRPF40A-206ENST00000471167 SOAT2O75908 522 aa6.31□□□□□ -1.4
PRPF40A-206ENST00000471167 GNAI2P04899 355 aa6.31□□□□□ -1.4
PRPF40A-206ENST00000471167 CD38P28907 300 aa6.31□□□□□ -1.4
PRPF40A-206ENST00000471167 LIPAP38571 399 aa6.31□□□□□ -1.4
PRPF40A-206ENST00000471167 AGFG1P52594 562 aaKnown RBP6.31□□□□□ -1.4
PRPF40A-206ENST00000471167 EPHB1P54762 984 aa6.31□□□□□ -1.4
PRPF40A-206ENST00000471167 LILRA4P59901 499 aa6.31□□□□□ -1.4
PRPF40A-206ENST00000471167 MRPS21P82921 87 aaKnown RBP6.31□□□□□ -1.4
PRPF40A-206ENST00000471167 TBCCQ15814 346 aa6.31□□□□□ -1.4
PRPF40A-206ENST00000471167 LONRF3Q496Y0 759 aa6.31□□□□□ -1.4
PRPF40A-206ENST00000471167 AMIGO2Q86SJ2 522 aa6.31□□□□□ -1.4
PRPF40A-206ENST00000471167 ZNF280BQ86YH2 543 aa6.31□□□□□ -1.4
PRPF40A-206ENST00000471167 DENND1CQ8IV53 801 aa6.31□□□□□ -1.4
PRPF40A-206ENST00000471167 ZBTB34Q8NCN2 500 aa6.31□□□□□ -1.4
PRPF40A-206ENST00000471167 ZMAT3Q9HA38 289 aaKnown RBP6.31□□□□□ -1.4
PRPF40A-206ENST00000471167 SERGEFQ9UGK8 458 aa6.31□□□□□ -1.4
PRPF40A-206ENST00000471167 E2F8A0AVK6 867 aa6.3□□□□□ -1.4
PRPF40A-206ENST00000471167 A6NNZ2 444 aa6.3□□□□□ -1.4
PRPF40A-206ENST00000471167 TUSC2O75896 110 aa6.3□□□□□ -1.4
PRPF40A-206ENST00000471167 UCP3P55916 312 aa6.3□□□□□ -1.4
PRPF40A-206ENST00000471167 GTF2H3Q13889 308 aa6.3□□□□□ -1.4
PRPF40A-206ENST00000471167 CCDC157Q569K6 752 aa6.3□□□□□ -1.4
PRPF40A-206ENST00000471167 GRASPQ7Z6J2 395 aaPredicted RBP6.3□□□□□ -1.4
PRPF40A-206ENST00000471167 DTX2Q86UW9 622 aa6.3□□□□□ -1.4
PRPF40A-206ENST00000471167 SIK2Q9H0K1 926 aa6.3□□□□□ -1.4
PRPF40A-206ENST00000471167 NMRK2Q9NPI5 230 aa6.3□□□□□ -1.4
PRPF40A-206ENST00000471167 ADARB2Q9NS39 739 aaKnown RBP6.3□□□□□ -1.4
PRPF40A-206ENST00000471167 hCG_1984214I3L0E3 225 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 ERC2O15083 957 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 URI1O94763 535 aaPredicted RBP6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 CSF1RP07333 972 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 GRPP07492 148 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 NHLRC4P0CG21 123 aaPredicted RBP6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 ZFXP17010 805 aaPredicted RBP6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 DRD4P21917 467 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 SLC11A2P49281 568 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 EIF2B5Q13144 721 aaKnown RBP6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 FGL2Q14314 439 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 NFE2Q16621 373 aaPredicted RBP6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 AKNAD1Q5T1N1 836 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 CAMKK1Q8N5S9 505 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 REPS1Q96D71 796 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 HAPLN3Q96S86 360 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 MESP1Q9BRJ9 268 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 ALG8Q9BVK2 526 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 TRIM54Q9BYV2 358 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 DPH1Q9BZG8 443 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 SMURF2Q9HAU4 748 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 EHD3Q9NZN3 535 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 XPR1Q9UBH6 696 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 SERTAD3Q9UJW9 196 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 MRPS17Q9Y2R5 130 aaKnown RBP6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 PLEKHM1Q9Y4G2 1056 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 FER1L4A9Z1Z3 1794 aa6.29□□□□□ -1.4
PRPF40A-206ENST00000471167 C1RP00736 705 aa6.28□□□□□ -1.4
PRPF40A-206ENST00000471167 CT47B1P0C2W7 299 aaPredicted RBP6.28□□□□□ -1.4
PRPF40A-206ENST00000471167 HSPA6P17066 643 aa6.28□□□□□ -1.4
PRPF40A-206ENST00000471167 NPNTQ6UXI9 565 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms