RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 GRIN2CQ14957 1233 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 PSMD6Q15008 389 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 UGCGQ16739 394 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 KYAT1Q16773 422 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 CBWD6Q4V339 395 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 FAM47CQ5HY64 1035 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 CBWD3Q5JTY5 395 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 CBWD5Q5RIA9 395 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 TMEM63BQ5T3F8 832 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 SEPT14Q6ZU15 432 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 PLPPR4Q7Z2D5 763 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 PEX26Q7Z412 305 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 IFT20Q8IY31 132 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 EFCAB13Q8IY85 973 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 FAM71AQ8IYT1 594 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 RASGEF1CQ8N431 466 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 UBL4BQ8N7F7 174 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 NOA1Q8NC60 698 aaKnown RBP6.06□□□□□ -1.44
HDAC8-216ENST00000470998 TTC16Q8NEE8 873 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 PPTC7Q8NI37 304 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 SLC30A5Q8TAD4 765 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 LMO3Q8TAP4 145 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 DEPTORQ8TB45 409 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 PARD3BQ8TEW8 1205 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 COG1Q8WTW3 980 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 AFG1LQ8WV93 481 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 ATRIPQ8WXE1 791 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 SEPT1Q8WYJ6 367 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 COPS5Q92905 334 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 BICD1Q96G01 975 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 RPS6KC1Q96S38 1066 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 CBWD1Q9BRT8 395 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 SAP130Q9H0E3 1048 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 ISCUQ9H1K1 167 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 AZI2Q9H6S1 392 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 MLXIPQ9HAP2 919 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 SLC28A3Q9HAS3 691 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 ZNF302Q9NR11 478 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 TRMT13Q9NUP7 481 aaKnown RBP6.06□□□□□ -1.44
HDAC8-216ENST00000470998 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.06□□□□□ -1.44
HDAC8-216ENST00000470998 PSD3Q9NYI0 1048 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 GTF2IRD1Q9UHL9 959 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 GTF3C4Q9UKN8 822 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 MKL2Q9ULH7 1088 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 PCDHA11Q9Y5I1 949 aa6.06□□□□□ -1.44
HDAC8-216ENST00000470998 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.06□□□□□ -1.44
HDAC8-216ENST00000470998 LRRC37A2A6NM11 1700 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 UMODL1Q5DID0 1318 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 ELOA3CA0A087WX78 387 aaPredicted RBP6.05□□□□□ -1.44
HDAC8-216ENST00000470998 ELOA3DA6NLF2 546 aaPredicted RBP6.05□□□□□ -1.44
HDAC8-216ENST00000470998 SHISA8B8ZZ34 492 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 HAS3O00219 553 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 SLC16A4O15374 487 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 ZNF862O60290 1169 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 RTN2O75298 545 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 MAFO75444 373 aaPredicted RBP6.05□□□□□ -1.44
HDAC8-216ENST00000470998 STBD1O95210 358 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 F2P00734 622 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 RHOXF2BP0C7M4 288 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 TRIM49P0CI25 452 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 TRIM49CP0CI26 452 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 HOXD8P13378 290 aaPredicted RBP6.05□□□□□ -1.44
HDAC8-216ENST00000470998 ATP2A2P16615 1042 aaKnown RBP6.05□□□□□ -1.44
HDAC8-216ENST00000470998 UBA1P22314 1058 aaKnown RBP6.05□□□□□ -1.44
HDAC8-216ENST00000470998 MAN1A1P33908 653 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 ARL2P36404 184 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 NOP2P46087 812 aaKnown RBP6.05□□□□□ -1.44
HDAC8-216ENST00000470998 ARID5AQ03989 594 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 POU5F1BQ06416 359 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 ARHGAP1Q07960 439 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 TFDP1Q14186 410 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 CASP8Q14790 479 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 PTGISQ16647 500 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 LY6KQ17RY6 165 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 ELOA3BQ3SY89 546 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 SPDYCQ5MJ68 293 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 ALS2CLQ60I27 953 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 PLA2G4FQ68DD2 849 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 SWSAP1Q6NVH7 229 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 CAPN12Q6ZSI9 719 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 CHSY3Q70JA7 882 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 OTOP2Q7RTS6 562 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 MAATS1Q7Z4T9 603 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 CCDC60Q8IWA6 550 aaPredicted RBP6.05□□□□□ -1.44
HDAC8-216ENST00000470998 ZBTB8OSQ8IWT0 167 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 MREGQ8N565 214 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 BEND7Q8N7W2 519 aaPredicted RBP6.05□□□□□ -1.44
HDAC8-216ENST00000470998 C7orf31Q8N865 590 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 USP38Q8NB14 1042 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 C1orf131Q8NDD1 294 aaKnown RBP6.05□□□□□ -1.44
HDAC8-216ENST00000470998 ELOA3Q8NG57 546 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 CCDC26Q8TAB7 109 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 MAIP1Q8WWC4 291 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 ATXN2LQ8WWM7 1075 aaKnown RBP6.05□□□□□ -1.44
HDAC8-216ENST00000470998 PIK3R5Q8WYR1 880 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 POMGNT1Q8WZA1 660 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 EXOC4Q96A65 974 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 HES6Q96HZ4 224 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 SCLYQ96I15 445 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 CAPZA3Q96KX2 299 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms