RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 BCAT1P54687 386 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 PSMC1P62191 440 aaKnown RBP10.35□□□□□ -0.75
CCM2-204ENST00000470837 GPC5P78333 572 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 USP41Q3LFD5 358 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 CTXN3Q4LDR2 81 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 MDH1BQ5I0G3 518 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 ARHGAP17Q68EM7 881 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 LCLAT1Q6UWP7 414 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 C4orf50Q6ZRC1 276 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 ANKS3Q6ZW76 656 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 TMCO2Q7Z6W1 182 aaPredicted RBP10.35□□□□□ -0.75
CCM2-204ENST00000470837 ERICH1Q86X53 443 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 HERC6Q8IVU3 1022 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 C17orf53Q8N3J3 647 aaPredicted RBP10.35□□□□□ -0.75
CCM2-204ENST00000470837 CPA5Q8WXQ8 436 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 TFAP2BQ92481 460 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 SECISBP2LQ93073 1101 aaKnown RBP10.35□□□□□ -0.75
CCM2-204ENST00000470837 ZNF653Q96CK0 615 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 CALR3Q96L12 384 aaKnown RBP10.35□□□□□ -0.75
CCM2-204ENST00000470837 RNPC3Q96LT9 517 aaKnown RBP10.35□□□□□ -0.75
CCM2-204ENST00000470837 SYT11Q9BT88 431 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 TTPALQ9BTX7 342 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 LHX5Q9H2C1 402 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 DPEP3Q9H4B8 488 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 ST7Q9NRC1 585 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 ADAM22Q9P0K1 906 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 TSPAN16Q9UKR8 245 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 STRIP2Q9ULQ0 834 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.35□□□□□ -0.75
CCM2-204ENST00000470837 RWDD3Q9Y3V2 267 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 MACROD2A1Z1Q3 448 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 OR6C75A6NL08 312 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 ZNF263O14978 683 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 ZNF500O60304 480 aaPredicted RBP10.34□□□□□ -0.75
CCM2-204ENST00000470837 B4GALT3O60512 393 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 CALCAP01258 141 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 CYP1A1P04798 512 aaPredicted RBP10.34□□□□□ -0.75
CCM2-204ENST00000470837 FAM200BP0CF97 657 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 SETSIPP0DME0 302 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 UNGP13051 313 aaPredicted RBP10.34□□□□□ -0.75
CCM2-204ENST00000470837 DESP17661 470 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 TKTP29401 623 aaKnown RBP10.34□□□□□ -0.75
CCM2-204ENST00000470837 SSTR3P32745 418 aaPredicted RBP10.34□□□□□ -0.75
CCM2-204ENST00000470837 PBX3P40426 434 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 EPHB4P54760 987 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 GALCP54803 685 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 NOMO3P69849 1222 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 CENPCQ03188 943 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 C1QBPQ07021 282 aaKnown RBP10.34□□□□□ -0.75
CCM2-204ENST00000470837 BST2Q10589 180 aaKnown RBP10.34□□□□□ -0.75
CCM2-204ENST00000470837 NFE2Q16621 373 aaPredicted RBP10.34□□□□□ -0.75
CCM2-204ENST00000470837 INTS6LQ5JSJ4 861 aaKnown RBP10.34□□□□□ -0.75
CCM2-204ENST00000470837 VARS2Q5ST30 1063 aaKnown RBP10.34□□□□□ -0.75
CCM2-204ENST00000470837 PPP1R26Q5T8A7 1209 aaPredicted RBP10.34□□□□□ -0.75
CCM2-204ENST00000470837 DENND1BQ6P3S1 775 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 ZNF662Q6ZS27 426 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 OSTM1Q86WC4 334 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 SPATA2LQ8IUW3 424 aaPredicted RBP10.34□□□□□ -0.75
CCM2-204ENST00000470837 RHOT2Q8IXI1 618 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 RNF10Q8N5U6 811 aaKnown RBP10.34□□□□□ -0.75
CCM2-204ENST00000470837 C12orf29Q8N999 325 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 COLGALT1Q8NBJ5 622 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 C1orf131Q8NDD1 294 aaKnown RBP10.34□□□□□ -0.75
CCM2-204ENST00000470837 SLC2A14Q8TDB8 520 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 IGSF21Q96ID5 467 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 VCPIP1Q96JH7 1222 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 C16orf45Q96MC5 204 aaPredicted RBP10.34□□□□□ -0.75
CCM2-204ENST00000470837 PCDHB18PQ96TA0 734 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 ISCUQ9H1K1 167 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 CWH43Q9H720 699 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 MRPL47Q9HD33 250 aaKnown RBP10.34□□□□□ -0.75
CCM2-204ENST00000470837 CXXC1Q9P0U4 656 aaPredicted RBP10.34□□□□□ -0.75
CCM2-204ENST00000470837 CTTNBP2NLQ9P2B4 639 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 MYO1AQ9UBC5 1043 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 SSX2IPQ9Y2D8 614 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 REXO2Q9Y3B8 237 aaKnown RBP10.34□□□□□ -0.75
CCM2-204ENST00000470837 MRPL42Q9Y6G3 142 aaKnown RBP10.34□□□□□ -0.75
CCM2-204ENST00000470837 SCINQ9Y6U3 715 aa10.34□□□□□ -0.75
CCM2-204ENST00000470837 USP27XA6NNY8 438 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 BTNL10A8MVZ5 291 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 F8W810 466 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 OAZ2O95190 189 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 URODP06132 367 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 CCDC130P13994 396 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 CPB1P15086 417 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 FGFR3P22607 806 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 CA8P35219 290 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 MAGEA10P43363 369 aaPredicted RBP10.33□□□□□ -0.76
CCM2-204ENST00000470837 ACADSBP45954 432 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 GNG11P61952 73 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 HTRA4P83105 476 aaPredicted RBP10.33□□□□□ -0.76
CCM2-204ENST00000470837 PLCB3Q01970 1234 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 CREMQ03060 361 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 SMARCB1Q12824 385 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 CD300LGQ6UXG3 332 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 PHF13Q86YI8 300 aaPredicted RBP10.33□□□□□ -0.76
CCM2-204ENST00000470837 REXO1L1PQ8IX06 675 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 MCOLN2Q8IZK6 566 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 SLC39A11Q8N1S5 342 aa10.33□□□□□ -0.76
CCM2-204ENST00000470837 ANKRD52Q8NB46 1076 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms