RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 ERICH1Q86X53 443 aa14.37□□□□□ -0.11
BRCA1-209ENST00000470026 ZBED8Q8IZ13 594 aa14.37□□□□□ -0.11
BRCA1-209ENST00000470026 KIF2BQ8N4N8 673 aa14.37□□□□□ -0.11
BRCA1-209ENST00000470026 NAT8LQ8N9F0 302 aa14.37□□□□□ -0.11
BRCA1-209ENST00000470026 FBF1Q8TES7 1133 aa14.37□□□□□ -0.11
BRCA1-209ENST00000470026 STAMBPL1Q96FJ0 436 aa14.37□□□□□ -0.11
BRCA1-209ENST00000470026 TMEM121Q9BTD3 319 aa14.37□□□□□ -0.11
BRCA1-209ENST00000470026 KIF9Q9HAQ2 790 aa14.37□□□□□ -0.11
BRCA1-209ENST00000470026 TXLNGQ9NUQ3 528 aa14.37□□□□□ -0.11
BRCA1-209ENST00000470026 RABGEF1Q9UJ41 708 aa14.37□□□□□ -0.11
BRCA1-209ENST00000470026 SIGLEC16A6NMB1 481 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 SPDYE16A6NNV3 312 aaPredicted RBP14.36□□□□□ -0.11
BRCA1-209ENST00000470026 POC1B-GALNT4F8VUJ3 575 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 FARP2O94887 1054 aaPredicted RBP14.36□□□□□ -0.11
BRCA1-209ENST00000470026 RPA3P35244 121 aaPredicted RBP14.36□□□□□ -0.11
BRCA1-209ENST00000470026 FSTL1Q12841 308 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 PDIA2Q13087 525 aaKnown RBP14.36□□□□□ -0.11
BRCA1-209ENST00000470026 DNAJC3Q13217 504 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 SLC1A5Q15758 541 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 ACCSLQ4AC99 568 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 FAM47EQ6ZV65 393 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 ARFGAP1Q8N6T3 406 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 TTC13Q8NBP0 860 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 MZB1Q8WU39 189 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 C10orf82Q8WW14 230 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 TBC1D31Q96DN5 1066 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 MRPL4Q9BYD3 311 aaKnown RBP14.36□□□□□ -0.11
BRCA1-209ENST00000470026 MTMR12Q9C0I1 747 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 PDGFDQ9GZP0 370 aaPredicted RBP14.36□□□□□ -0.11
BRCA1-209ENST00000470026 XYLT2Q9H1B5 865 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 MYLK2Q9H1R3 596 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 LHX5Q9H2C1 402 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 LRMDAQ9H2I8 198 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 VPS37BQ9H9H4 285 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 PICK1Q9NRD5 415 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 NRBP2Q9NSY0 501 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 CPSF3Q9UKF6 684 aaKnown RBP14.36□□□□□ -0.11
BRCA1-209ENST00000470026 STRIP2Q9ULQ0 834 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 CHKBQ9Y259 395 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 C15orf41Q9Y2V0 281 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 OGTO15294 1046 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 TSHRP16473 764 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 UBA1P22314 1058 aaKnown RBP14.36□□□□□ -0.11
BRCA1-209ENST00000470026 ASPAP45381 313 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 GEMIN4P57678 1058 aaKnown RBP14.36□□□□□ -0.11
BRCA1-209ENST00000470026 PDE4CQ08493 712 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 CBLBQ13191 982 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 HIF1AQ16665 826 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 DUOXA2Q1HG44 320 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 ADGRD1Q6QNK2 874 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 PPIL6Q8IXY8 311 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 CHST13Q8NET6 341 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 JDP2Q8WYK2 163 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 CPT1BQ92523 772 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 SPOCK2Q92563 424 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 UTP4Q969X6 686 aaKnown RBP14.36□□□□□ -0.11
BRCA1-209ENST00000470026 TMEM237Q96Q45 408 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 ACO2Q99798 780 aaKnown RBP14.36□□□□□ -0.11
BRCA1-209ENST00000470026 WDR83Q9BRX9 315 aaKnown RBP14.36□□□□□ -0.11
BRCA1-209ENST00000470026 MAK16Q9BXY0 300 aaKnown RBP14.36□□□□□ -0.11
BRCA1-209ENST00000470026 HOXC10Q9NYD6 342 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 TRIM33Q9UPN9 1127 aa14.36□□□□□ -0.11
BRCA1-209ENST00000470026 A0A1W2PPM1 405 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 SGK1O00141 431 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 SMAPO00193 183 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 LRCH4O75427 683 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 ANP32DO95626 131 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 ITGBL1O95965 494 aaPredicted RBP14.35□□□□□ -0.11
BRCA1-209ENST00000470026 HOXC6P09630 235 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 KRT15P19012 456 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 PROZP22891 400 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 EDNRBP24530 442 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 CCNG1P51959 295 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 PTPN20Q4JDL3 420 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 ZFYVE27Q5T4F4 411 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 ZNF276Q8N554 614 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 ACSF2Q96CM8 615 aaPredicted RBP14.35□□□□□ -0.11
BRCA1-209ENST00000470026 WRNIP1Q96S55 665 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 SLCO1B3Q9NPD5 702 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 NOP53Q9NZM5 478 aaKnown RBP14.35□□□□□ -0.11
BRCA1-209ENST00000470026 L3MBTL1Q9Y468 752 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 DCTN3O75935 186 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 ZWINTO95229 277 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 KRT7P08729 469 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 IL1R2P27930 398 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 RFC1P35251 1148 aaPredicted RBP14.35□□□□□ -0.11
BRCA1-209ENST00000470026 CTCFP49711 727 aaPredicted RBP14.35□□□□□ -0.11
BRCA1-209ENST00000470026 SAMD7Q7Z3H4 446 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 THNSL1Q8IYQ7 743 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 C4orf33Q8N1A6 199 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 GPATCH11Q8N954 259 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 ATP11CQ8NB49 1132 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 ACTL9Q8TC94 416 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 ZNF398Q8TD17 642 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 N4BP2L2Q92802 583 aaPredicted RBP14.35□□□□□ -0.11
BRCA1-209ENST00000470026 INPP5DQ92835 1189 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 HAUS1Q96CS2 278 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 FAXDC2Q96IV6 333 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 RAB3IPQ96QF0 476 aaPredicted RBP14.35□□□□□ -0.11
BRCA1-209ENST00000470026 ACSS3Q9H6R3 686 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms