RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 TMEM151BQ8IW70 566 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 FAM43AQ8N2R8 423 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 ANKRD13CQ8N6S4 541 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 SLC44A5Q8NCS7 719 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 C1orf162Q8NEQ5 155 aaPredicted RBP7.19□□□□□ -1.26
PTCD3-208ENST00000469585 GPRC5AQ8NFJ5 357 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 NCOA7Q8NI08 942 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 PAGR1Q9BTK6 254 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 KATNBL1Q9H079 304 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 RPAP3Q9H6T3 665 aaPredicted RBP7.19□□□□□ -1.26
PTCD3-208ENST00000469585 VCPKMTQ9H867 229 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 UPF2Q9HAU5 1272 aaKnown RBP7.19□□□□□ -1.26
PTCD3-208ENST00000469585 CCM2LQ9NUG4 571 aaPredicted RBP7.19□□□□□ -1.26
PTCD3-208ENST00000469585 NYAP2Q9P242 653 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 FTSJ1Q9UET6 329 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 Q9UFV3 132 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 CPA4Q9UI42 421 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 SPEF1Q9Y4P9 236 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 ATAD5Q96QE3 1844 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 CDK5RAP2Q96SN8 1893 aa7.19□□□□□ -1.26
PTCD3-208ENST00000469585 BAZ2AQ9UIF9 1905 aaKnown RBP7.19□□□□□ -1.26
PTCD3-208ENST00000469585 DHX16O60231 1041 aaKnown RBP7.18□□□□□ -1.26
PTCD3-208ENST00000469585 PCDH8O95206 1070 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 LPLP06858 475 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 CELA3BP08861 270 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 HMGB1P09429 215 aaKnown RBP7.18□□□□□ -1.26
PTCD3-208ENST00000469585 MYBL2P10244 700 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 RBP3P10745 1247 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 GSPT1P15170 499 aaKnown RBP7.18□□□□□ -1.26
PTCD3-208ENST00000469585 VCAM1P19320 739 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 HOXA7P31268 230 aaPredicted RBP7.18□□□□□ -1.26
PTCD3-208ENST00000469585 PSMC4P43686 418 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 STAT2P52630 851 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 UBXN2AP68543 259 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 EIF4HQ15056 248 aaKnown RBP7.18□□□□□ -1.26
PTCD3-208ENST00000469585 DGKDQ16760 1214 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 UGT8Q16880 541 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 VMACQ2NL98 169 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 SLC9C1Q4G0N8 1177 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 FAM47AQ5JRC9 791 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 KCNK18Q7Z418 384 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 ZNF589Q86UQ0 364 aaPredicted RBP7.18□□□□□ -1.26
PTCD3-208ENST00000469585 FAM160B2Q86V87 743 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 SPICE1Q8N0Z3 855 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 ADAMTS17Q8TE56 1095 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 SOCS4Q8WXH5 440 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 FUBP3Q96I24 572 aaKnown RBP eCLIP7.18□□□□□ -1.26
PTCD3-208ENST00000469585 FAXDC2Q96IV6 333 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 C12orf42Q96LP6 360 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 TTC14Q96N46 770 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 MPHOSPH6Q99547 160 aaKnown RBP7.18□□□□□ -1.26
PTCD3-208ENST00000469585 KCTD10Q9H3F6 313 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 DNAJC18Q9H819 358 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 MTMR4Q9NYA4 1195 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 FEM1BQ9UK73 627 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 TMX2Q9Y320 296 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 RABGAP1Q9Y3P9 1069 aa7.18□□□□□ -1.26
PTCD3-208ENST00000469585 MAFGO15525 162 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 CUTAO60888 179 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 SLC25A27O95847 323 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 CFBP00751 764 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 TOP1P11387 765 aaKnown RBP7.17□□□□□ -1.26
PTCD3-208ENST00000469585 PSMA5P28066 241 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 ETV4P43268 484 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 NEK2P51955 445 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 KRT85P78386 507 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.17□□□□□ -1.26
PTCD3-208ENST00000469585 FAM26FQ5R3K3 315 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 TREML2Q5T2D2 321 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 IFIT1BQ5T764 474 aaKnown RBP7.17□□□□□ -1.26
PTCD3-208ENST00000469585 VPS53Q5VIR6 699 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 TCERG1LQ5VWI1 586 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 MCTP2Q6DN12 878 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 FBXO46Q6PJ61 603 aaPredicted RBP7.17□□□□□ -1.26
PTCD3-208ENST00000469585 Q6ZUG5 572 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 OTOP2Q7RTS6 562 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 CATIPQ7Z7H3 387 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 ZNF761Q86XN6 746 aaPredicted RBP7.17□□□□□ -1.26
PTCD3-208ENST00000469585 C1QL4Q86Z23 238 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 TMTC2Q8N394 836 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 TXNDC5Q8NBS9 432 aaKnown RBP7.17□□□□□ -1.26
PTCD3-208ENST00000469585 CD99L2Q8TCZ2 262 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 RSAD2Q8WXG1 361 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 CEP95Q96GE4 821 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 AJUBAQ96IF1 538 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 RAX2Q96IS3 184 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 PTPN18Q99952 460 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 SLF1Q9BQI6 1058 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 SLC13A1Q9BZW2 595 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 PRSS50Q9UI38 385 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 MAGEL2Q9UJ55 1249 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 CDC42EP3Q9UKI2 254 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 EDARQ9UNE0 448 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 PCDHB6Q9Y5E3 794 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 PLIN4Q96Q06 1357 aa7.17□□□□□ -1.26
PTCD3-208ENST00000469585 A0A0A6YYK5 440 aaPredicted RBP7.16□□□□□ -1.26
PTCD3-208ENST00000469585 CCDC69A6NI79 296 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 B4DLN1 442 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 F5H6K3 240 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 IFIT3O14879 490 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms