RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 ZNF461Q8TAF7 563 aa16.19■□□□□ 0.18
SNIP1-202ENST00000468040 MYCBPAPQ8TBZ2 947 aa16.19■□□□□ 0.18
SNIP1-202ENST00000468040 C2orf15Q8WU43 125 aaKnown RBP16.19■□□□□ 0.18
SNIP1-202ENST00000468040 TMEM209Q96SK2 561 aa16.19■□□□□ 0.18
SNIP1-202ENST00000468040 PKMYT1Q99640 499 aa16.19■□□□□ 0.18
SNIP1-202ENST00000468040 GPR88Q9GZN0 384 aa16.19■□□□□ 0.18
SNIP1-202ENST00000468040 TLE6Q9H808 572 aa16.19■□□□□ 0.18
SNIP1-202ENST00000468040 MAFFQ9ULX9 164 aa16.19■□□□□ 0.18
SNIP1-202ENST00000468040 CHD7Q9P2D1 2997 aa16.19■□□□□ 0.18
SNIP1-202ENST00000468040 WDR27A2RRH5 827 aa16.18■□□□□ 0.18
SNIP1-202ENST00000468040 MYBPHLA2RUH7 354 aa16.18■□□□□ 0.18
SNIP1-202ENST00000468040 FOXN3O00409 490 aaPredicted RBP16.18■□□□□ 0.18
SNIP1-202ENST00000468040 ATP2C2O75185 946 aa16.18■□□□□ 0.18
SNIP1-202ENST00000468040 ADCY5O95622 1261 aa16.18■□□□□ 0.18
SNIP1-202ENST00000468040 OR4Q2P0C623 313 aa16.18■□□□□ 0.18
SNIP1-202ENST00000468040 CDC25BP30305 580 aa16.18■□□□□ 0.18
SNIP1-202ENST00000468040 SOX5P35711 763 aa16.18■□□□□ 0.18
SNIP1-202ENST00000468040 FXR1P51114 621 aaKnown RBP eCLIP16.18■□□□□ 0.18
SNIP1-202ENST00000468040 BPIFB4P59827 614 aa16.18■□□□□ 0.18
SNIP1-202ENST00000468040 ORC1Q13415 861 aa16.18■□□□□ 0.18
SNIP1-202ENST00000468040 DUSP6Q16828 381 aa16.18■□□□□ 0.18
SNIP1-202ENST00000468040 MDH1BQ5I0G3 518 aa16.18■□□□□ 0.18
SNIP1-202ENST00000468040 C4orf50Q6ZRC1 276 aa16.18■□□□□ 0.18
SNIP1-202ENST00000468040 GLYCTKQ8IVS8 523 aa16.18■□□□□ 0.18
SNIP1-202ENST00000468040 SLC4A11Q8NBS3 891 aa16.18■□□□□ 0.18
SNIP1-202ENST00000468040 HEXIM2Q96MH2 286 aaKnown RBP16.18■□□□□ 0.18
SNIP1-202ENST00000468040 NUCKS1Q9H1E3 243 aaKnown RBP16.18■□□□□ 0.18
SNIP1-202ENST00000468040 CRTAC1Q9NQ79 661 aa16.18■□□□□ 0.18
SNIP1-202ENST00000468040 AFF4Q9UHB7 1163 aaKnown RBP16.18■□□□□ 0.18
SNIP1-202ENST00000468040 DPP7Q9UHL4 492 aa16.18■□□□□ 0.18
SNIP1-202ENST00000468040 GTF3C4Q9UKN8 822 aa16.18■□□□□ 0.18
SNIP1-202ENST00000468040 CAPN11Q9UMQ6 739 aa16.18■□□□□ 0.18
SNIP1-202ENST00000468040 MTCH2Q9Y6C9 303 aa16.18■□□□□ 0.18
SNIP1-202ENST00000468040 RNF225M0QZC1 329 aaPredicted RBP16.17■□□□□ 0.18
SNIP1-202ENST00000468040 CLASP2O75122 1294 aaKnown RBP16.17■□□□□ 0.18
SNIP1-202ENST00000468040 ABLIM3O94929 683 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 GLUD1P00367 558 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 GYPCP04921 128 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 CCDC172P0C7W6 258 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 VDRP11473 427 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 ATF2P15336 505 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 IGFBP4P22692 258 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 ZBED6P86452 979 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 CYP27A1Q02318 531 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 PTK2Q05397 1052 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 ADGRE1Q14246 886 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 ELMSAN1Q6PJG2 1045 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 TMC6Q7Z403 805 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.17■□□□□ 0.18
SNIP1-202ENST00000468040 ADGRD2Q7Z7M1 963 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 LRRTM3Q86VH5 581 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 PALB2Q86YC2 1186 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 SPATA2LQ8IUW3 424 aaPredicted RBP16.17■□□□□ 0.18
SNIP1-202ENST00000468040 DEFB123Q8N688 67 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 SPPL2BQ8TCT7 592 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 BAP1Q92560 729 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 MYLPFQ96A32 169 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 PCED1BQ96HM7 432 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 FUBP3Q96I24 572 aaKnown RBP eCLIP16.17■□□□□ 0.18
SNIP1-202ENST00000468040 ABCB6Q9NP58 842 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 HSFX1Q9UBD0 423 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 LUC7L2Q9Y383 392 aaKnown RBP16.17■□□□□ 0.18
SNIP1-202ENST00000468040 PCDHB5Q9Y5E4 795 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 ATG2AQ2TAZ0 1938 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 ATP8B3O60423 1300 aa16.17■□□□□ 0.18
SNIP1-202ENST00000468040 MTMR11A4FU01 709 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 CYP26A1O43174 497 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 MED7O43513 233 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 TGM5O43548 720 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 PNMA6AP0CW24 399 aaPredicted RBP16.16■□□□□ 0.18
SNIP1-202ENST00000468040 CD19P15391 556 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 GNA15P30679 374 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 ELF1P32519 619 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 NRIP1P48552 1158 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 CLCN4P51793 760 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 STILQ15468 1287 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 CFAP221Q4G0U5 840 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 SGO2Q562F6 1265 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 TCEAL5Q5H9L2 206 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 ARHGAP17Q68EM7 881 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 RNF19BQ6ZMZ0 732 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 Q7L0L9 218 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 RBM23Q86U06 439 aaKnown RBP16.16■□□□□ 0.18
SNIP1-202ENST00000468040 C12orf29Q8N999 325 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 CPLX3Q8WVH0 158 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 CYFIP2Q96F07 1278 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 PGLYRP2Q96PD5 576 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 TMLHEQ9NVH6 421 aa16.16■□□□□ 0.18
SNIP1-202ENST00000468040 ABI2Q9NYB9 513 aaPredicted RBP16.16■□□□□ 0.18
SNIP1-202ENST00000468040 LRRC53A6NM62 1247 aa16.15■□□□□ 0.18
SNIP1-202ENST00000468040 PER2O15055 1255 aa16.15■□□□□ 0.18
SNIP1-202ENST00000468040 GFPT2O94808 682 aa16.15■□□□□ 0.18
SNIP1-202ENST00000468040 FERP16591 822 aa16.15■□□□□ 0.18
SNIP1-202ENST00000468040 CASP14P31944 242 aa16.15■□□□□ 0.18
SNIP1-202ENST00000468040 CLCN1P35523 988 aa16.15■□□□□ 0.18
SNIP1-202ENST00000468040 PDE6CP51160 858 aa16.15■□□□□ 0.18
SNIP1-202ENST00000468040 ADCY1Q08828 1119 aa16.15■□□□□ 0.18
SNIP1-202ENST00000468040 SFMBT2Q5VUG0 894 aa16.15■□□□□ 0.18
SNIP1-202ENST00000468040 LILRA6Q6PI73 481 aa16.15■□□□□ 0.18
SNIP1-202ENST00000468040 RTL10Q7L3V2 364 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms