RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 CXorf56Q9H5V9 222 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 HAUS4Q9H6D7 363 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 ZNHIT6Q9NWK9 470 aaKnown RBP7.3□□□□□ -1.24
SCAF4-204ENST00000467731 ARHGAP20Q9P2F6 1191 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 PCDHA11Q9Y5I1 949 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 C5orf42Q9H799 3197 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 ARHGEF37A1IGU5 675 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 CARNS1A5YM72 827 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 NRDCO43847 1150 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 TYMPP19971 482 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 FGFR3P22607 806 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 GNA15P30679 374 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 CTNNB1P35222 781 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 PRKCIP41743 596 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 LHX1P48742 406 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 PDE6CP51160 858 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 CDR1P51861 262 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 PSMC1P62191 440 aaKnown RBP7.3□□□□□ -1.24
SCAF4-204ENST00000467731 PTK2Q05397 1052 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 KLHL30Q0D2K2 578 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 VARS2Q5ST30 1063 aaKnown RBP7.3□□□□□ -1.24
SCAF4-204ENST00000467731 ACOT1Q86TX2 421 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 METTL23Q86XA0 190 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 TMEM139Q8IV31 216 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 KLHL23Q8NBE8 558 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 BAG1Q99933 345 aaPredicted RBP7.3□□□□□ -1.24
SCAF4-204ENST00000467731 RTP3Q9BQQ7 232 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 TTPALQ9BTX7 342 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 PUF60Q9UHX1 559 aaKnown RBP7.3□□□□□ -1.24
SCAF4-204ENST00000467731 ZKSCAN5Q9Y2L8 839 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 ATP2C2O75185 946 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 SOD2P04179 222 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 SERPING1P05155 500 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 FAM163BP0C2L3 166 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 BMPR1AP36894 532 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 SETDB1Q15047 1291 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 CCDC142Q17RM4 750 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 USP41Q3LFD5 358 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 KIAA0319Q5VV43 1072 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 NOP9Q86U38 636 aaKnown RBP7.29□□□□□ -1.24
SCAF4-204ENST00000467731 OR10T2Q8NGX3 314 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 SPATA18Q8TC71 538 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 SLC20A1Q8WUM9 679 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 LPIN3Q9BQK8 851 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 PRO3102Q9H379 93 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 KCNF1Q9H3M0 494 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 ALG13Q9NP73 1137 aaKnown RBP7.29□□□□□ -1.24
SCAF4-204ENST00000467731 CHST7Q9NS84 486 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 RWDD3Q9Y3V2 267 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 SOWAHDA6NJG2 315 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 C2CD2LO14523 706 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 THAP12O43422 761 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 OAZ2O95190 189 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 PAEPP09466 180 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 CD19P15391 556 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 FECHP22830 423 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 SSTR3P32745 418 aaPredicted RBP7.29□□□□□ -1.24
SCAF4-204ENST00000467731 BPIFB4P59827 614 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 PLCB3Q01970 1234 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 KRT17Q04695 432 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 BIRC2Q13490 618 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 CYP26C1Q6V0L0 522 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 ZNF571Q7Z3V5 609 aaPredicted RBP7.29□□□□□ -1.24
SCAF4-204ENST00000467731 DDX53Q86TM3 631 aaKnown RBP7.29□□□□□ -1.24
SCAF4-204ENST00000467731 VPS52Q8N1B4 723 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 B3GALNT2Q8NCR0 500 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 TFAP2BQ92481 460 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 DDX1Q92499 740 aaKnown RBP7.29□□□□□ -1.24
SCAF4-204ENST00000467731 TNIP3Q96KP6 325 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 HEXIM2Q96MH2 286 aaKnown RBP7.29□□□□□ -1.24
SCAF4-204ENST00000467731 TMEM209Q96SK2 561 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 ZSWIM1Q9BR11 485 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 FAM49BQ9NUQ9 324 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 NOCTQ9UK39 431 aaKnown RBP7.29□□□□□ -1.24
SCAF4-204ENST00000467731 ATG2AQ2TAZ0 1938 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 MMEP08473 750 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 CFHP08603 1231 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 PCSK1P29120 753 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 CCZ1BP86790 482 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 CCZ1P86791 482 aaPredicted RBP7.29□□□□□ -1.24
SCAF4-204ENST00000467731 CDK17Q00537 523 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 TAP1Q03518 808 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 MRPL58Q14197 206 aaKnown RBP7.29□□□□□ -1.24
SCAF4-204ENST00000467731 C11orf91Q3C1V1 193 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 PPP1R26Q5T8A7 1209 aaPredicted RBP7.29□□□□□ -1.24
SCAF4-204ENST00000467731 ZNF280DQ6N043 979 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 KIAA1841Q6NSI8 718 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 PRSS55Q6UWB4 352 aaPredicted RBP7.29□□□□□ -1.24
SCAF4-204ENST00000467731 CCDC91Q7Z6B0 441 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 CRYBG2Q8N1P7 616 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 THEM5Q8N1Q8 247 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 LNX1Q8TBB1 728 aaPredicted RBP7.29□□□□□ -1.24
SCAF4-204ENST00000467731 ZNF606Q8WXB4 792 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 TGS1Q96RS0 853 aaKnown RBP7.29□□□□□ -1.24
SCAF4-204ENST00000467731 SYT15Q9BQS2 421 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 ACBD6Q9BR61 282 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 PLVAPQ9BX97 442 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 NHEJ1Q9H9Q4 299 aaPredicted RBP7.29□□□□□ -1.24
SCAF4-204ENST00000467731 CRTAC1Q9NQ79 661 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms