RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 GMIPQ9P107 970 aa13.82□□□□□ -0.2
UBR4-210ENST00000466969 CALCOCO1Q9P1Z2 691 aa13.82□□□□□ -0.2
UBR4-210ENST00000466969 FTSJ1Q9UET6 329 aa13.82□□□□□ -0.2
UBR4-210ENST00000466969 CYP8B1Q9UNU6 501 aa13.82□□□□□ -0.2
UBR4-210ENST00000466969 SLC27A5Q9Y2P5 690 aa13.82□□□□□ -0.2
UBR4-210ENST00000466969 PCDHGA1Q9Y5H4 931 aa13.82□□□□□ -0.2
UBR4-210ENST00000466969 U3KPZ7 1027 aaPredicted RBP13.82□□□□□ -0.2
UBR4-210ENST00000466969 MEI4A8MW99 385 aa13.81□□□□□ -0.2
UBR4-210ENST00000466969 PODXLO00592 558 aa13.81□□□□□ -0.2
UBR4-210ENST00000466969 N4BP3O15049 544 aa13.81□□□□□ -0.2
UBR4-210ENST00000466969 PSMD10O75832 226 aa13.81□□□□□ -0.2
UBR4-210ENST00000466969 MARCKSP29966 332 aaPredicted RBP13.81□□□□□ -0.2
UBR4-210ENST00000466969 QARSP47897 775 aaKnown RBP13.81□□□□□ -0.2
UBR4-210ENST00000466969 CAPSQ13938 189 aa13.81□□□□□ -0.2
UBR4-210ENST00000466969 KIAA1614Q5VZ46 1190 aa13.81□□□□□ -0.2
UBR4-210ENST00000466969 CASC1Q6TDU7 716 aa13.81□□□□□ -0.2
UBR4-210ENST00000466969 USP49Q70CQ1 688 aa13.81□□□□□ -0.2
UBR4-210ENST00000466969 SGMS1Q86VZ5 419 aa13.81□□□□□ -0.2
UBR4-210ENST00000466969 NOSTRINQ8IVI9 506 aa13.81□□□□□ -0.2
UBR4-210ENST00000466969 TMTC2Q8N394 836 aa13.81□□□□□ -0.2
UBR4-210ENST00000466969 ZCCHC9Q8N567 271 aaKnown RBP13.81□□□□□ -0.2
UBR4-210ENST00000466969 KRI1Q8N9T8 703 aaKnown RBP13.81□□□□□ -0.2
UBR4-210ENST00000466969 EXOC6Q8TAG9 804 aa13.81□□□□□ -0.2
UBR4-210ENST00000466969 CCDC136Q96JN2 1154 aa13.81□□□□□ -0.2
UBR4-210ENST00000466969 NFKBIZQ9BYH8 718 aa13.81□□□□□ -0.2
UBR4-210ENST00000466969 WNT6Q9Y6F9 365 aa13.81□□□□□ -0.2
UBR4-210ENST00000466969 SPTBN1Q01082 2364 aaKnown RBP13.8□□□□□ -0.2
UBR4-210ENST00000466969 ESYT2A0FGR8 921 aa13.8□□□□□ -0.2
UBR4-210ENST00000466969 BLACEA4D250 179 aa13.8□□□□□ -0.2
UBR4-210ENST00000466969 KLK10O43240 276 aa13.8□□□□□ -0.2
UBR4-210ENST00000466969 VNN2O95498 520 aa13.8□□□□□ -0.2
UBR4-210ENST00000466969 DDX6P26196 483 aaKnown RBP eCLIP13.8□□□□□ -0.2
UBR4-210ENST00000466969 ANTXR2P58335 489 aa13.8□□□□□ -0.2
UBR4-210ENST00000466969 SF3A1Q15459 793 aaKnown RBP13.8□□□□□ -0.2
UBR4-210ENST00000466969 INAVAQ3KP66 663 aa13.8□□□□□ -0.2
UBR4-210ENST00000466969 HES3Q5TGS1 186 aa13.8□□□□□ -0.2
UBR4-210ENST00000466969 OTUD6AQ7L8S5 288 aa13.8□□□□□ -0.2
UBR4-210ENST00000466969 RAB11FIP4Q86YS3 637 aa13.8□□□□□ -0.2
UBR4-210ENST00000466969 RIN3Q8TB24 985 aa13.8□□□□□ -0.2
UBR4-210ENST00000466969 TSC1Q92574 1164 aa13.8□□□□□ -0.2
UBR4-210ENST00000466969 DDX12PQ92771 950 aa13.8□□□□□ -0.2
UBR4-210ENST00000466969 PRIMPOLQ96LW4 560 aa13.8□□□□□ -0.2
UBR4-210ENST00000466969 OXCT2Q9BYC2 517 aaPredicted RBP13.8□□□□□ -0.2
UBR4-210ENST00000466969 MIR1-1HGQ9H1L0 117 aa13.8□□□□□ -0.2
UBR4-210ENST00000466969 UTP20O75691 2785 aaKnown RBP13.79□□□□□ -0.2
UBR4-210ENST00000466969 E7EWF7 191 aa13.79□□□□□ -0.2
UBR4-210ENST00000466969 SOAT2O75908 522 aa13.79□□□□□ -0.2
UBR4-210ENST00000466969 OR4Q2P0C623 313 aa13.79□□□□□ -0.2
UBR4-210ENST00000466969 GABRG2P18507 467 aa13.79□□□□□ -0.2
UBR4-210ENST00000466969 MCM4P33991 863 aa13.79□□□□□ -0.2
UBR4-210ENST00000466969 OPRD1P41143 372 aa13.79□□□□□ -0.2
UBR4-210ENST00000466969 TLE1Q04724 770 aa13.79□□□□□ -0.2
UBR4-210ENST00000466969 YWHAHQ04917 246 aaPredicted RBP13.79□□□□□ -0.2
UBR4-210ENST00000466969 ZNF268Q14587 947 aaPredicted RBP13.79□□□□□ -0.2
UBR4-210ENST00000466969 EML3Q32P44 896 aa13.79□□□□□ -0.2
UBR4-210ENST00000466969 HIST2H2BCQ6DN03 193 aa13.79□□□□□ -0.2
UBR4-210ENST00000466969 CENPPQ6IPU0 288 aa13.79□□□□□ -0.2
UBR4-210ENST00000466969 DHX40Q8IX18 779 aaKnown RBP13.79□□□□□ -0.2
UBR4-210ENST00000466969 EFCAB13Q8IY85 973 aa13.79□□□□□ -0.2
UBR4-210ENST00000466969 REXO1Q8N1G1 1221 aaKnown RBP13.79□□□□□ -0.2
UBR4-210ENST00000466969 FANCBQ8NB91 859 aa13.79□□□□□ -0.2
UBR4-210ENST00000466969 OXER1Q8TDS5 423 aa13.79□□□□□ -0.2
UBR4-210ENST00000466969 KCNE4Q8WWG9 221 aa13.79□□□□□ -0.2
UBR4-210ENST00000466969 SUSD3Q96L08 255 aa13.79□□□□□ -0.2
UBR4-210ENST00000466969 IL21Q9HBE4 155 aa13.79□□□□□ -0.2
UBR4-210ENST00000466969 C6orf50Q9HD87 102 aa13.79□□□□□ -0.2
UBR4-210ENST00000466969 PRMT7Q9NVM4 692 aaPredicted RBP13.79□□□□□ -0.2
UBR4-210ENST00000466969 CACNA1DQ01668 2161 aa13.78□□□□□ -0.2
UBR4-210ENST00000466969 MYMKA6NI61 221 aa13.78□□□□□ -0.2
UBR4-210ENST00000466969 HIP1O00291 1037 aa13.78□□□□□ -0.2
UBR4-210ENST00000466969 ADAM23O75077 832 aa13.78□□□□□ -0.2
UBR4-210ENST00000466969 RFPL3O75679 317 aa13.78□□□□□ -0.2
UBR4-210ENST00000466969 NFATC1O95644 943 aa13.78□□□□□ -0.2
UBR4-210ENST00000466969 CYP21A2P08686 494 aa13.78□□□□□ -0.2
UBR4-210ENST00000466969 GPR17Q13304 367 aa13.78□□□□□ -0.2
UBR4-210ENST00000466969 XKR9Q5GH70 373 aa13.78□□□□□ -0.2
UBR4-210ENST00000466969 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.78□□□□□ -0.2
UBR4-210ENST00000466969 ASAP3Q8TDY4 903 aa13.78□□□□□ -0.2
UBR4-210ENST00000466969 ZNF578Q96N58 590 aaPredicted RBP13.78□□□□□ -0.2
UBR4-210ENST00000466969 PDZD7Q9H5P4 517 aa13.78□□□□□ -0.2
UBR4-210ENST00000466969 ZDHHC4Q9NPG8 344 aa13.78□□□□□ -0.2
UBR4-210ENST00000466969 STARD5Q9NSY2 213 aa13.78□□□□□ -0.2
UBR4-210ENST00000466969 SLC38A7Q9NVC3 462 aa13.78□□□□□ -0.2
UBR4-210ENST00000466969 SLC12A7Q9Y666 1083 aa13.78□□□□□ -0.2
UBR4-210ENST00000466969 V9GY48 417 aaPredicted RBP13.78□□□□□ -0.2
UBR4-210ENST00000466969 CNTNAP5Q8WYK1 1306 aa13.78□□□□□ -0.2
UBR4-210ENST00000466969 ITPR2Q14571 2701 aa13.78□□□□□ -0.2
UBR4-210ENST00000466969 ANO9A1A5B4 782 aa13.77□□□□□ -0.21
UBR4-210ENST00000466969 BCAT2O15382 392 aaPredicted RBP13.77□□□□□ -0.21
UBR4-210ENST00000466969 POLQO75417 2590 aa13.77□□□□□ -0.21
UBR4-210ENST00000466969 APODP05090 189 aa13.77□□□□□ -0.21
UBR4-210ENST00000466969 C1SP09871 688 aa13.77□□□□□ -0.21
UBR4-210ENST00000466969 YWHABP31946 246 aaKnown RBP13.77□□□□□ -0.21
UBR4-210ENST00000466969 SOX4Q06945 474 aaPredicted RBP13.77□□□□□ -0.21
UBR4-210ENST00000466969 EMC10Q5UCC4 262 aa13.77□□□□□ -0.21
UBR4-210ENST00000466969 TXNDC8Q6A555 127 aa13.77□□□□□ -0.21
UBR4-210ENST00000466969 B3GNT9Q6UX72 402 aa13.77□□□□□ -0.21
UBR4-210ENST00000466969 PPP4R3CPQ6ZMV5 832 aa13.77□□□□□ -0.21
UBR4-210ENST00000466969 FAM26EQ8N5C1 309 aa13.77□□□□□ -0.21
UBR4-210ENST00000466969 ATAD1Q8NBU5 361 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms