RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 CD248Q9HCU0 757 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 NECTIN3Q9NQS3 549 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 TBC1D23Q9NUY8 699 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 RNF181Q9P0P0 153 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 CTTNBP2NLQ9P2B4 639 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 MID2Q9UJV3 735 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 TCAF1Q9Y4C2 921 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 CHST2Q9Y4C5 530 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 FPGT-TNNI3KV9GXZ4 949 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 A0A1W2PS29 197 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 MYADML2A6NDP7 307 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 AQP7P3A6NL99 342 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 DCLK1O15075 740 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 VPS4BO75351 444 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 FGFR4P22455 802 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 ACVR2AP27037 513 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 GRK6P43250 576 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 GCLCP48506 637 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 PXNP49023 591 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 CPT1AP50416 773 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 LOXL3P58215 753 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 RNASE9P60153 205 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 CRHR2Q13324 411 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 DYRK1AQ13627 763 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 BLMHQ13867 455 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 TRIM14Q14142 442 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 RRP1BQ14684 758 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 ICAM4Q14773 271 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 HLXQ14774 488 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 CCDC38Q502W7 563 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 ARL6IP4Q66PJ3 421 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 SFRP4Q6FHJ7 346 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 TAF2Q6P1X5 1199 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 SLC30A10Q6XR72 485 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 SMAP1Q8IYB5 467 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 TMEM132CQ8N3T6 1108 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 TTC9BQ8N6N2 239 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 PSD4Q8NDX1 1056 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 MYRIPQ8NFW9 859 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 ZNF483Q8TF39 744 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 RAPGEF4Q8WZA2 1011 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 CCT6BQ92526 530 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 BOD1Q96IK1 185 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 LRIG1Q96JA1 1093 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 WWC2-AS2Q96NR7 200 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 PTDSS2Q9BVG9 487 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 DEF6Q9H4E7 631 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 TMEM8AQ9HCN3 771 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 HEYLQ9NQ87 328 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 GJB4Q9NTQ9 266 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 HSFX1Q9UBD0 423 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 DKK4Q9UBT3 224 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 KCNE5Q9UJ90 142 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 SLC39A10Q9ULF5 831 aa5.21□□□□□ -1.58
CDC42BPA-211ENST00000466538 PRAMEF33A0A0G2JMD5 474 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 GRXCR1A8MXD5 290 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 ZNF185O15231 689 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 PRAMEF10O60809 474 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 NBNO60934 754 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 ERN1O75460 977 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 RPS6KA4O75676 772 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 SUN1O94901 812 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 SCAF4O95104 1147 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 CSTBP04080 98 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 CFIP05156 583 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 TPH1P17752 444 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 ITGALP20701 1170 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 CHKAP35790 457 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 DGKEP52429 567 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 RPS7P62081 194 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 BOP1Q14137 746 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 ELF2Q15723 593 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 ZACNQ401N2 412 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 SPDYE7PQ495Y7 208 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 PDCD4Q53EL6 469 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 RABL3Q5HYI8 236 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 ERICH6BQ5W0A0 696 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 PLAG1Q6DJT9 500 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 FCRL6Q6DN72 434 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 FBXO38Q6PIJ6 1188 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 NSUN7Q8NE18 718 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 MUL1Q969V5 352 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 LRRC46Q96FV0 321 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 ADOQ96SZ5 270 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 SLC46A2Q9BY10 475 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 TTYH3Q9C0H2 523 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 TMEM74BQ9NUR3 256 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 MRPS18AQ9NVS2 196 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 TRPM5Q9NZQ8 1165 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 VSX1Q9NZR4 365 aaPredicted RBP5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 SORCS3Q9UPU3 1222 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 MTO1Q9Y2Z2 717 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 TESMINQ9Y4I5 508 aa5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 MORC2Q9Y6X9 1032 aaPredicted RBP5.2□□□□□ -1.58
CDC42BPA-211ENST00000466538 AHRRA9YTQ3 701 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 RAB27BO00194 218 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 RNASET2O00584 256 aaKnown RBP5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 TRIAP1O43715 76 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 PIP5K1CO60331 668 aa5.19□□□□□ -1.58
CDC42BPA-211ENST00000466538 ACRV1P26436 265 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms