RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 TUBB4AP04350 444 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 GALTP07902 379 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 CFHP08603 1231 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 MYBL1P10243 752 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 UNGP13051 313 aaPredicted RBP12.87□□□□□ -0.35
VPS16-206ENST00000466415 TNNT1P13805 278 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 LAG3P18627 525 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 LMO2P25791 158 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 ADORA2BP29275 332 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 ARHGAP25P42331 645 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 NOP2P46087 812 aaKnown RBP12.87□□□□□ -0.35
VPS16-206ENST00000466415 SLC8A3P57103 927 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 GNG11P61952 73 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 CNGA2Q16280 664 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 TMEM240Q5SV17 173 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 ARHGAP17Q68EM7 881 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 DENND1BQ6P3S1 775 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 FUT10Q6P4F1 479 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 LCLAT1Q6UWP7 414 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 CD300LGQ6UXG3 332 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 TMCO2Q7Z6W1 182 aaPredicted RBP12.87□□□□□ -0.35
VPS16-206ENST00000466415 DNAAF5Q86Y56 855 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 CRYBG2Q8N1P7 616 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 C12orf29Q8N999 325 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 IPO4Q8TEX9 1081 aaKnown RBP12.87□□□□□ -0.35
VPS16-206ENST00000466415 ZNF689Q96CS4 500 aaPredicted RBP12.87□□□□□ -0.35
VPS16-206ENST00000466415 ZNF558Q96NG5 402 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 SLC9A7Q96T83 725 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.87□□□□□ -0.351e-6■■□□□ 12.3
VPS16-206ENST00000466415 MED10Q9BTT4 135 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 LACRTQ9GZZ8 138 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 LHX5Q9H2C1 402 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 SYNCQ9H7C4 482 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 MARCH5Q9NX47 278 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 TRIM10Q9UDY6 481 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 NME7Q9Y5B8 376 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 NR2E3Q9Y5X4 410 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 SLC4A7Q9Y6M7 1214 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 NCANO14594 1321 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 TSC2P49815 1807 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 BTNL10A8MVZ5 291 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 NT5C1B-RDH14C9J2C7 533 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 CALB1P05937 261 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 CCDC130P13994 396 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 PTPN1P18031 435 aaKnown RBP12.86□□□□□ -0.35
VPS16-206ENST00000466415 TKTP29401 623 aaKnown RBP12.86□□□□□ -0.35
VPS16-206ENST00000466415 PBX3P40426 434 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 BCAT1P54687 386 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 GPC5P78333 572 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 MDH1BQ5I0G3 518 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 PPP1R26Q5T8A7 1209 aaPredicted RBP12.86□□□□□ -0.35
VPS16-206ENST00000466415 FAM171A1Q5VUB5 890 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 ZNF280DQ6N043 979 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.86□□□□□ -0.35
VPS16-206ENST00000466415 NYAP1Q6ZVC0 841 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 C16orf59Q7L2K0 433 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 CEP57Q86XR8 500 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 RFFLQ8WZ73 363 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 HERVK_113Q902F9 699 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 ZSWIM1Q9BR11 485 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 C11orf70Q9BRQ4 267 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 THAP2Q9H0W7 228 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 CWH43Q9H720 699 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 AAASQ9NRG9 546 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 ADAM22Q9P0K1 906 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 CTTNBP2NLQ9P2B4 639 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 MYO1AQ9UBC5 1043 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 GTF3C4Q9UKN8 822 aa12.86□□□□□ -0.35
VPS16-206ENST00000466415 FNDC1Q4ZHG4 1894 aaPredicted RBP12.86□□□□□ -0.35
VPS16-206ENST00000466415 A0A0A6YYK5 440 aaPredicted RBP12.85□□□□□ -0.35
VPS16-206ENST00000466415 BUB1O43683 1085 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 GJB5O95377 273 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 MOCS3O95396 460 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 SETSIPP0DME0 302 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 CDH5P33151 784 aaPredicted RBP12.85□□□□□ -0.35
VPS16-206ENST00000466415 EPHB4P54760 987 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 SNX16P57768 344 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 C1QBPQ07021 282 aaKnown RBP12.85□□□□□ -0.35
VPS16-206ENST00000466415 MAPRE1Q15691 268 aaKnown RBP12.85□□□□□ -0.35
VPS16-206ENST00000466415 INTS6LQ5JSJ4 861 aaKnown RBP12.85□□□□□ -0.35
VPS16-206ENST00000466415 ZNF569Q5MCW4 686 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 KCNT2Q6UVM3 1135 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 MMS22LQ6ZRQ5 1243 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 ERICH1Q86X53 443 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 PHF13Q86YI8 300 aaPredicted RBP12.85□□□□□ -0.35
VPS16-206ENST00000466415 RHOT2Q8IXI1 618 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 MCOLN2Q8IZK6 566 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 FIBCD1Q8N539 461 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 RNF10Q8N5U6 811 aaKnown RBP12.85□□□□□ -0.35
VPS16-206ENST00000466415 UBA3Q8TBC4 463 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 SLC2A14Q8TDB8 520 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 ZNF592Q92610 1267 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 TMEM169Q96HH4 297 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 ACBD6Q9BR61 282 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 MIS12Q9H081 205 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 RC3H2Q9HBD1 1191 aaKnown RBP12.85□□□□□ -0.35
VPS16-206ENST00000466415 ST7Q9NRC1 585 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 CNOT8Q9UFF9 292 aaKnown RBP12.85□□□□□ -0.35
VPS16-206ENST00000466415 STRIP2Q9ULQ0 834 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 PAXBP1Q9Y5B6 917 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms