RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 MAB21L3Q8N8X9 362 aa22.19■■□□□ 1.14
COL6A1-203ENST00000466285 SPPL2BQ8TCT7 592 aa22.19■■□□□ 1.14
COL6A1-203ENST00000466285 SLC22A12Q96S37 553 aa22.19■■□□□ 1.14
COL6A1-203ENST00000466285 IER2Q9BTL4 223 aa22.19■■□□□ 1.14
COL6A1-203ENST00000466285 MTMR12Q9C0I1 747 aa22.19■■□□□ 1.14
COL6A1-203ENST00000466285 C8orf33Q9H7E9 229 aaPredicted RBP22.19■■□□□ 1.14
COL6A1-203ENST00000466285 PDE11AQ9HCR9 933 aa22.19■■□□□ 1.14
COL6A1-203ENST00000466285 OBP2AQ9NY56 170 aa22.19■■□□□ 1.14
COL6A1-203ENST00000466285 RBAKQ9NYW8 714 aaPredicted RBP22.19■■□□□ 1.14
COL6A1-203ENST00000466285 SPAG17Q6Q759 2223 aa22.19■■□□□ 1.14
COL6A1-203ENST00000466285 PRPF6O94906 941 aaKnown RBP22.18■■□□□ 1.14
COL6A1-203ENST00000466285 IL18RAPO95256 599 aa22.18■■□□□ 1.14
COL6A1-203ENST00000466285 IDEP14735 1019 aa22.18■■□□□ 1.14
COL6A1-203ENST00000466285 CYP2F1P24903 491 aa22.18■■□□□ 1.14
COL6A1-203ENST00000466285 CDC25CP30307 473 aa22.18■■□□□ 1.14
COL6A1-203ENST00000466285 PXNP49023 591 aaPredicted RBP22.18■■□□□ 1.14
COL6A1-203ENST00000466285 LRRC32Q14392 662 aa22.18■■□□□ 1.14
COL6A1-203ENST00000466285 DDR2Q16832 855 aa22.18■■□□□ 1.14
COL6A1-203ENST00000466285 FSTL4Q6MZW2 842 aa22.18■■□□□ 1.14
COL6A1-203ENST00000466285 THEM5Q8N1Q8 247 aa22.18■■□□□ 1.14
COL6A1-203ENST00000466285 NOC3LQ8WTT2 800 aaKnown RBP22.18■■□□□ 1.14
COL6A1-203ENST00000466285 ZNF560Q96MR9 790 aa22.18■■□□□ 1.14
COL6A1-203ENST00000466285 ACCSQ96QU6 501 aa22.18■■□□□ 1.14
COL6A1-203ENST00000466285 EBF3Q9H4W6 596 aa22.18■■□□□ 1.14
COL6A1-203ENST00000466285 UPF2Q9HAU5 1272 aaKnown RBP22.18■■□□□ 1.14
COL6A1-203ENST00000466285 MAGED2Q9UNF1 606 aaPredicted RBP22.18■■□□□ 1.14
COL6A1-203ENST00000466285 MTMR6Q9Y217 621 aa22.18■■□□□ 1.14
COL6A1-203ENST00000466285 SDK1Q7Z5N4 2213 aa22.18■■□□□ 1.14
COL6A1-203ENST00000466285 FGF19O95750 216 aa22.17■■□□□ 1.14
COL6A1-203ENST00000466285 WEE1P30291 646 aa22.17■■□□□ 1.14
COL6A1-203ENST00000466285 SV2BQ7L1I2 683 aa22.17■■□□□ 1.14
COL6A1-203ENST00000466285 OR5B17Q8NGF7 314 aa22.17■■□□□ 1.14
COL6A1-203ENST00000466285 MSANTD3Q96H12 275 aa22.17■■□□□ 1.14
COL6A1-203ENST00000466285 GCNAQ96QF7 691 aa22.17■■□□□ 1.14
COL6A1-203ENST00000466285 FAM83CQ9BQN1 747 aa22.17■■□□□ 1.14
COL6A1-203ENST00000466285 FBRSL1Q9HCM7 1045 aaKnown RBP22.17■■□□□ 1.14
COL6A1-203ENST00000466285 OLFML3Q9NRN5 406 aa22.17■■□□□ 1.14
COL6A1-203ENST00000466285 GKN1Q9NS71 199 aa22.17■■□□□ 1.14
COL6A1-203ENST00000466285 DDX43Q9NXZ2 648 aaKnown RBP22.17■■□□□ 1.14
COL6A1-203ENST00000466285 SEL1LQ9UBV2 794 aa22.17■■□□□ 1.14
COL6A1-203ENST00000466285 CCDC39Q9UFE4 941 aa22.17■■□□□ 1.14
COL6A1-203ENST00000466285 PCDHB5Q9Y5E4 795 aa22.17■■□□□ 1.14
COL6A1-203ENST00000466285 DCDC2BA2VCK2 349 aa22.16■■□□□ 1.14
COL6A1-203ENST00000466285 PRPF40AO75400 957 aaKnown RBP22.16■■□□□ 1.14
COL6A1-203ENST00000466285 PAPSS2O95340 614 aaPredicted RBP22.16■■□□□ 1.14
COL6A1-203ENST00000466285 GAP43P17677 238 aa22.16■■□□□ 1.14
COL6A1-203ENST00000466285 PAX3P23760 479 aa22.16■■□□□ 1.14
COL6A1-203ENST00000466285 HOXD13P35453 343 aa22.16■■□□□ 1.14
COL6A1-203ENST00000466285 INTS6LQ5JSJ4 861 aaKnown RBP22.16■■□□□ 1.14
COL6A1-203ENST00000466285 LAIR1Q6GTX8 287 aa22.16■■□□□ 1.14
COL6A1-203ENST00000466285 CELF5Q8N6W0 485 aaKnown RBP22.16■■□□□ 1.14
COL6A1-203ENST00000466285 PDILTQ8N807 584 aa22.16■■□□□ 1.14
COL6A1-203ENST00000466285 C2orf15Q8WU43 125 aaKnown RBP22.16■■□□□ 1.14
COL6A1-203ENST00000466285 EZH1Q92800 747 aaPredicted RBP22.16■■□□□ 1.14
COL6A1-203ENST00000466285 GMEB2Q9UKD1 530 aa22.16■■□□□ 1.14
COL6A1-203ENST00000466285 GTF3C4Q9UKN8 822 aa22.16■■□□□ 1.14
COL6A1-203ENST00000466285 NME7Q9Y5B8 376 aa22.16■■□□□ 1.14
COL6A1-203ENST00000466285 ATP2C2O75185 946 aa22.15■■□□□ 1.14
COL6A1-203ENST00000466285 ABCD1P33897 745 aa22.15■■□□□ 1.14
COL6A1-203ENST00000466285 STAT6P42226 847 aa22.15■■□□□ 1.14
COL6A1-203ENST00000466285 NRLP54845 237 aa22.15■■□□□ 1.14
COL6A1-203ENST00000466285 POU5F1Q01860 360 aaKnown RBP22.15■■□□□ 1.14
COL6A1-203ENST00000466285 SIM2Q14190 667 aaPredicted RBP22.15■■□□□ 1.14
COL6A1-203ENST00000466285 ITPRIPL2Q3MIP1 535 aa22.15■■□□□ 1.14
COL6A1-203ENST00000466285 CBWD2Q8IUF1 395 aa22.15■■□□□ 1.14
COL6A1-203ENST00000466285 DCP1BQ8IZD4 617 aaKnown RBP22.15■■□□□ 1.14
COL6A1-203ENST00000466285 ANTXRLA6NF34 631 aa22.14■■□□□ 1.13
COL6A1-203ENST00000466285 GDF9O60383 454 aa22.14■■□□□ 1.13
COL6A1-203ENST00000466285 EGFP01133 1207 aa22.14■■□□□ 1.13
COL6A1-203ENST00000466285 PSMC1P62191 440 aaKnown RBP22.14■■□□□ 1.13
COL6A1-203ENST00000466285 TSPY1Q01534 308 aa22.14■■□□□ 1.13
COL6A1-203ENST00000466285 LMNB2Q03252 620 aa22.14■■□□□ 1.13
COL6A1-203ENST00000466285 POSTNQ15063 836 aa22.14■■□□□ 1.13
COL6A1-203ENST00000466285 TAF12Q16514 161 aa22.14■■□□□ 1.13
COL6A1-203ENST00000466285 DGKKQ5KSL6 1271 aa22.14■■□□□ 1.13
COL6A1-203ENST00000466285 NT5DC4Q86YG4 428 aa22.14■■□□□ 1.13
COL6A1-203ENST00000466285 CSGALNACT2Q8N6G5 542 aa22.14■■□□□ 1.13
COL6A1-203ENST00000466285 LEO1Q8WVC0 666 aaPredicted RBP22.14■■□□□ 1.13
COL6A1-203ENST00000466285 KBTBD7Q8WVZ9 684 aa22.14■■□□□ 1.13
COL6A1-203ENST00000466285 PANK4Q9NVE7 773 aa22.14■■□□□ 1.13
COL6A1-203ENST00000466285 CDV3Q9UKY7 258 aaKnown RBP22.14■■□□□ 1.13
COL6A1-203ENST00000466285 SNX9Q9Y5X1 595 aa22.14■■□□□ 1.13
COL6A1-203ENST00000466285 NOL4O94818 638 aa22.13■■□□□ 1.13
COL6A1-203ENST00000466285 KRT19P08727 400 aa22.13■■□□□ 1.13
COL6A1-203ENST00000466285 GARTP22102 1010 aa22.13■■□□□ 1.13
COL6A1-203ENST00000466285 PLCB2Q00722 1185 aa22.13■■□□□ 1.13
COL6A1-203ENST00000466285 RUNX3Q13761 415 aa22.13■■□□□ 1.13
COL6A1-203ENST00000466285 PPP2R5DQ14738 602 aa22.13■■□□□ 1.13
COL6A1-203ENST00000466285 SLC39A14Q15043 492 aa22.13■■□□□ 1.13
COL6A1-203ENST00000466285 CCDC6Q16204 474 aa22.13■■□□□ 1.13
COL6A1-203ENST00000466285 E2F4Q16254 413 aa22.13■■□□□ 1.13
COL6A1-203ENST00000466285 SOWAHAQ2M3V2 549 aa22.13■■□□□ 1.13
COL6A1-203ENST00000466285 TMEM196Q5HYL7 178 aa22.13■■□□□ 1.13
COL6A1-203ENST00000466285 LONP2Q86WA8 852 aa22.13■■□□□ 1.13
COL6A1-203ENST00000466285 ADGRF2Q8IZF7 708 aa22.13■■□□□ 1.13
COL6A1-203ENST00000466285 SYCP3Q8IZU3 236 aa22.13■■□□□ 1.13
COL6A1-203ENST00000466285 FAM160A2Q8N612 972 aaPredicted RBP22.13■■□□□ 1.13
COL6A1-203ENST00000466285 CYP2S1Q96SQ9 504 aa22.13■■□□□ 1.13
COL6A1-203ENST00000466285 EXOC7Q9UPT5 735 aa22.13■■□□□ 1.13
COL6A1-203ENST00000466285 LMO2P25791 158 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms