RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 CDH9Q9ULB4 789 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 IRAK3Q9Y616 596 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 C5orf42Q9H799 3197 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 BRWD1Q9NSI6 2320 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 TMEM265A0A087WTH1 108 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 H7C4K7 107 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 VNN2O95498 520 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 TPM1P09493 284 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 CYP11B1P15538 503 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 FERP16591 822 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 PTPN1P18031 435 aaKnown RBP11.86□□□□□ -0.51
VCP-204ENST00000466100 RPL17P18621 184 aaKnown RBP11.86□□□□□ -0.51
VCP-204ENST00000466100 IRS1P35568 1242 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 ASIC2Q16515 512 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 SFMBT2Q5VUG0 894 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 ACOT1Q86TX2 421 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 NOP9Q86U38 636 aaKnown RBP11.86□□□□□ -0.51
VCP-204ENST00000466100 DRC7Q8IY82 874 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 THEM5Q8N1Q8 247 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 C12orf29Q8N999 325 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 ZNF397Q8NF99 534 aaPredicted RBP11.86□□□□□ -0.51
VCP-204ENST00000466100 ARNTL2Q8WYA1 636 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 TNIP3Q96KP6 325 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 PPP1R9BQ96SB3 815 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 CLSTN3Q9BQT9 956 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 OXCT2Q9BYC2 517 aaPredicted RBP11.86□□□□□ -0.51
VCP-204ENST00000466100 LMAN2LQ9H0V9 348 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 TTYH1Q9H313 450 aaPredicted RBP11.86□□□□□ -0.51
VCP-204ENST00000466100 TLR9Q9NR96 1032 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 TMLHEQ9NVH6 421 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 FNIP2Q9P278 1114 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 PUF60Q9UHX1 559 aaKnown RBP11.86□□□□□ -0.51
VCP-204ENST00000466100 PCDHGC5Q9Y5F6 944 aa11.86□□□□□ -0.51
VCP-204ENST00000466100 MYBPHLA2RUH7 354 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 C2orf71A6NGG8 1288 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 O00370 1275 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 C2CD2LO14523 706 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 TEX28O15482 410 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 CNPP09543 421 aaKnown RBP11.85□□□□□ -0.51
VCP-204ENST00000466100 OR4Q2P0C623 313 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 VDRP11473 427 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 CHRNB2P17787 502 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 BRD2P25440 801 aaKnown RBP11.85□□□□□ -0.51
VCP-204ENST00000466100 GNA15P30679 374 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 USP8P40818 1118 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 BPIFB4P59827 614 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 TSPY1Q01534 308 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 ROR1Q01973 937 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 ARHGAP17Q68EM7 881 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 KIAA1841Q6NSI8 718 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 PAQR9Q6ZVX9 377 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 TMC7Q7Z402 723 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 TMEM139Q8IV31 216 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 FMNL3Q8IVF7 1028 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 FUKQ8N0W3 1084 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 MRPL43Q8N983 215 aaKnown RBP11.85□□□□□ -0.51
VCP-204ENST00000466100 MYCBPAPQ8TBZ2 947 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 SLC20A1Q8WUM9 679 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 MYLPFQ96A32 169 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 PANX2Q96RD6 677 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 TCF25Q9BQ70 676 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 ZNF576Q9H609 170 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 NGRNQ9NPE2 291 aaKnown RBP11.85□□□□□ -0.51
VCP-204ENST00000466100 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.85□□□□□ -0.51
VCP-204ENST00000466100 MRPL17Q9NRX2 175 aaKnown RBP11.85□□□□□ -0.51
VCP-204ENST00000466100 ARHGAP20Q9P2F6 1191 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 GTF3C4Q9UKN8 822 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 KIAA1257Q9ULG3 409 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 SSX2IPQ9Y2D8 614 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 CDY1Q9Y6F8 540 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 MYO16Q9Y6X6 1858 aa11.85□□□□□ -0.51
VCP-204ENST00000466100 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.84□□□□□ -0.51
VCP-204ENST00000466100 WDR27A2RRH5 827 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 HIDE1A8MVS5 230 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 RFXAPO00287 272 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 CXCL14O95715 111 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 PLEKP08567 350 aaPredicted RBP11.84□□□□□ -0.51
VCP-204ENST00000466100 CFHP08603 1231 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 CCDC130P13994 396 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 GSDMDP57764 484 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 CDK17Q00537 523 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 CREMQ03060 361 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 ARID5AQ03989 594 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 PTK2Q05397 1052 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 CCDC173Q0VFZ6 552 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 GPR17Q13304 367 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 RAB33AQ14088 237 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 SMC1AQ14683 1233 aaKnown RBP11.84□□□□□ -0.51
VCP-204ENST00000466100 SLC39A12Q504Y0 691 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 PKDCCQ504Y2 493 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 SGO2Q562F6 1265 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 MDH1BQ5I0G3 518 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 PPP1R26Q5T8A7 1209 aaPredicted RBP11.84□□□□□ -0.51
VCP-204ENST00000466100 PLPP4Q5VZY2 271 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 CCDC186Q7Z3E2 898 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 ZNF571Q7Z3V5 609 aaPredicted RBP11.84□□□□□ -0.51
VCP-204ENST00000466100 ZNF606Q8WXB4 792 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 ANP32BQ92688 251 aaKnown RBP11.84□□□□□ -0.51
VCP-204ENST00000466100 PCED1BQ96HM7 432 aa11.84□□□□□ -0.51
VCP-204ENST00000466100 HNRNPABQ99729 332 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms