RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 C22orf23Q9BZE7 217 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 LRRC27Q9C0I9 530 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 ZMAT3Q9HA38 289 aaKnown RBP5.34□□□□□ -1.55
LRCH3-211ENST00000466054 ATP6V0A4Q9HBG4 840 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 SLAMF7Q9NQ25 335 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 KLHL11Q9NVR0 708 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 STAP2Q9UGK3 403 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 PCDHA6Q9UN73 950 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 DMTF1Q9Y222 760 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 CGB1A6NKQ9 187 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 ISM1B1AKI9 464 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 PLIN1O60240 522 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 PRSS23O95084 383 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 THP07101 528 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 NPR1P16066 1061 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 RPL17P18621 184 aaKnown RBP5.33□□□□□ -1.56
LRCH3-211ENST00000466054 PEX2P28328 305 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 NOMO3P69849 1222 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 SLFN5Q08AF3 891 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 TCF15Q12870 199 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 HABP2Q14520 560 aaPredicted RBP5.33□□□□□ -1.56
LRCH3-211ENST00000466054 NOMO2Q5JPE7 1267 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 TSHZ3Q63HK5 1081 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 APOA5Q6Q788 366 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 CCDC146Q8IYE0 955 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 TMIEQ8NEW7 156 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 OR56A1Q8NGH5 318 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 RNF31Q96EP0 1072 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 KLHL32Q96NJ5 620 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 NT5C1BQ96P26 610 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 BHMT2Q9H2M3 363 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 CPA4Q9UI42 421 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 TPCN1Q9ULQ1 816 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 SLC45A2Q9UMX9 530 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 NEU2Q9Y3R4 380 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 PAXBP1Q9Y5B6 917 aa5.33□□□□□ -1.56
LRCH3-211ENST00000466054 A0A1B0GTW7 788 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 CCDC194A0A1B0GVG4 234 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 ANO9A1A5B4 782 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 ZNF785A8K8V0 405 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 MYO1FO00160 1098 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 ORC4O43929 436 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 MYF5P13349 255 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 HDCP19113 662 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 EN2P19622 333 aaPredicted RBP5.32□□□□□ -1.56
LRCH3-211ENST00000466054 KCNJ5P48544 419 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 ARFIP2P53365 341 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 POU6F2P78424 691 aaPredicted RBP5.32□□□□□ -1.56
LRCH3-211ENST00000466054 EXOSC9Q06265 439 aaKnown RBP5.32□□□□□ -1.56
LRCH3-211ENST00000466054 PIGFQ07326 219 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 COBLL1Q53SF7 1204 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 FOXR2Q6PJQ5 311 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 KSR2Q6VAB6 950 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 KRT78Q8N1N4 520 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 SLC17A8Q8NDX2 589 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 DDB2Q92466 427 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 APIPQ96GX9 242 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 AIFM2Q9BRQ8 373 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 CNPPD1Q9BV87 410 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 TRIM54Q9BYV2 358 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 DPH1Q9BZG8 443 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 IMPG2Q9BZV3 1241 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 BTBD1Q9H0C5 482 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 NUP62CLQ9H1M0 184 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 IL17RBQ9NRM6 502 aa5.32□□□□□ -1.56
LRCH3-211ENST00000466054 IGKV2-30P06310 120 aa5.31□□□□□ -1.56
LRCH3-211ENST00000466054 KITP10721 976 aa5.31□□□□□ -1.56
LRCH3-211ENST00000466054 FCER1AP12319 257 aa5.31□□□□□ -1.56
LRCH3-211ENST00000466054 SLC7A1P30825 629 aa5.31□□□□□ -1.56
LRCH3-211ENST00000466054 PTGER1P34995 402 aa5.31□□□□□ -1.56
LRCH3-211ENST00000466054 PHKA1P46020 1223 aa5.31□□□□□ -1.56
LRCH3-211ENST00000466054 PSMC1P62191 440 aaKnown RBP5.31□□□□□ -1.56
LRCH3-211ENST00000466054 ZNF844Q08AG5 666 aa5.31□□□□□ -1.56
LRCH3-211ENST00000466054 USP37Q86T82 979 aa5.31□□□□□ -1.56
LRCH3-211ENST00000466054 MAPKAPK5Q8IW41 473 aa5.31□□□□□ -1.56
LRCH3-211ENST00000466054 OR6B3Q8NGW1 331 aa5.31□□□□□ -1.56
LRCH3-211ENST00000466054 MARS2Q96GW9 593 aaKnown RBP5.31□□□□□ -1.56
LRCH3-211ENST00000466054 TINAGL1Q9GZM7 467 aaPredicted RBP5.31□□□□□ -1.56
LRCH3-211ENST00000466054 FOXJ2Q9P0K8 574 aa5.31□□□□□ -1.56
LRCH3-211ENST00000466054 KCNE5Q9UJ90 142 aa5.31□□□□□ -1.56
LRCH3-211ENST00000466054 PLEKHM1Q9Y4G2 1056 aa5.31□□□□□ -1.56
LRCH3-211ENST00000466054 E9PLN8 166 aa5.3□□□□□ -1.56
LRCH3-211ENST00000466054 FOXN3O00409 490 aaPredicted RBP5.3□□□□□ -1.56
LRCH3-211ENST00000466054 KCNAB3O43448 404 aa5.3□□□□□ -1.56
LRCH3-211ENST00000466054 GPANK1O95872 356 aa5.3□□□□□ -1.56
LRCH3-211ENST00000466054 NBPF7P0C2Y1 421 aaPredicted RBP5.3□□□□□ -1.56
LRCH3-211ENST00000466054 FGFR4P22455 802 aa5.3□□□□□ -1.56
LRCH3-211ENST00000466054 ZNF135P52742 658 aaPredicted RBP5.3□□□□□ -1.56
LRCH3-211ENST00000466054 MAP9Q49MG5 647 aa5.3□□□□□ -1.56
LRCH3-211ENST00000466054 ZNF783Q6ZMS7 281 aa5.3□□□□□ -1.56
LRCH3-211ENST00000466054 COL23A1Q86Y22 540 aaPredicted RBP5.3□□□□□ -1.56
LRCH3-211ENST00000466054 CFAP52Q8N1V2 620 aa5.3□□□□□ -1.56
LRCH3-211ENST00000466054 CELF5Q8N6W0 485 aaKnown RBP5.3□□□□□ -1.56
LRCH3-211ENST00000466054 SPATA3Q8NHX4 192 aa5.3□□□□□ -1.56
LRCH3-211ENST00000466054 PDLIM2Q96JY6 352 aa5.3□□□□□ -1.56
LRCH3-211ENST00000466054 UROC1Q96N76 676 aa5.3□□□□□ -1.56
LRCH3-211ENST00000466054 FCRL4Q96PJ5 515 aa5.3□□□□□ -1.56
LRCH3-211ENST00000466054 SMOQ99835 787 aa5.3□□□□□ -1.56
LRCH3-211ENST00000466054 VKORC1Q9BQB6 163 aa5.3□□□□□ -1.56
LRCH3-211ENST00000466054 TLR10Q9BXR5 811 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms