RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 KBTBD4Q9NVX7 518 aa22.43■■□□□ 1.18
CSPG5-204ENST00000465441 GDAP2Q9NXN4 497 aa22.43■■□□□ 1.18
CSPG5-204ENST00000465441 NCDNQ9UBB6 729 aa22.43■■□□□ 1.18
CSPG5-204ENST00000465441 SIX4Q9UIU6 781 aa22.43■■□□□ 1.18
CSPG5-204ENST00000465441 GTF3C4Q9UKN8 822 aa22.43■■□□□ 1.18
CSPG5-204ENST00000465441 ITGA11Q9UKX5 1188 aa22.43■■□□□ 1.18
CSPG5-204ENST00000465441 SNX9Q9Y5X1 595 aa22.43■■□□□ 1.18
CSPG5-204ENST00000465441 CYP2F1P24903 491 aa22.42■■□□□ 1.18
CSPG5-204ENST00000465441 CTHP32929 405 aa22.42■■□□□ 1.18
CSPG5-204ENST00000465441 NLRP12P59046 1061 aa22.42■■□□□ 1.18
CSPG5-204ENST00000465441 MYL7Q01449 175 aa22.42■■□□□ 1.18
CSPG5-204ENST00000465441 SATB1Q01826 763 aa22.42■■□□□ 1.18
CSPG5-204ENST00000465441 TNK2Q07912 1038 aa22.42■■□□□ 1.18
CSPG5-204ENST00000465441 PPP2R5DQ14738 602 aa22.42■■□□□ 1.18
CSPG5-204ENST00000465441 E2F4Q16254 413 aa22.42■■□□□ 1.18
CSPG5-204ENST00000465441 LMBRD2Q68DH5 695 aaPredicted RBP22.42■■□□□ 1.18
CSPG5-204ENST00000465441 TMEM86AQ8N2M4 240 aa22.42■■□□□ 1.18
CSPG5-204ENST00000465441 MAB21L3Q8N8X9 362 aa22.42■■□□□ 1.18
CSPG5-204ENST00000465441 STKLD1Q8NE28 680 aa22.42■■□□□ 1.18
CSPG5-204ENST00000465441 MTMR12Q9C0I1 747 aa22.42■■□□□ 1.18
CSPG5-204ENST00000465441 LRRC27Q9C0I9 530 aa22.42■■□□□ 1.18
CSPG5-204ENST00000465441 GKN1Q9NS71 199 aa22.42■■□□□ 1.18
CSPG5-204ENST00000465441 MAGED2Q9UNF1 606 aaPredicted RBP22.42■■□□□ 1.18
CSPG5-204ENST00000465441 SPTBN4Q9H254 2564 aa22.41■■□□□ 1.18
CSPG5-204ENST00000465441 KIAA0391O15091 583 aaKnown RBP22.41■■□□□ 1.18
CSPG5-204ENST00000465441 TMEM191BP0C7N4 346 aa22.41■■□□□ 1.18
CSPG5-204ENST00000465441 CSH1P0DML2 217 aa22.41■■□□□ 1.18
CSPG5-204ENST00000465441 CSH2P0DML3 217 aa22.41■■□□□ 1.18
CSPG5-204ENST00000465441 HOXD13P35453 343 aa22.41■■□□□ 1.18
CSPG5-204ENST00000465441 PLCB2Q00722 1185 aa22.41■■□□□ 1.18
CSPG5-204ENST00000465441 LRRC32Q14392 662 aa22.41■■□□□ 1.18
CSPG5-204ENST00000465441 DDR2Q16832 855 aa22.41■■□□□ 1.18
CSPG5-204ENST00000465441 INTS6LQ5JSJ4 861 aaKnown RBP22.41■■□□□ 1.18
CSPG5-204ENST00000465441 SPEM1Q8N4L4 309 aa22.41■■□□□ 1.18
CSPG5-204ENST00000465441 LEO1Q8WVC0 666 aaPredicted RBP22.41■■□□□ 1.18
CSPG5-204ENST00000465441 ANKRD36BP1Q96IX9 119 aa22.41■■□□□ 1.18
CSPG5-204ENST00000465441 ZNF396Q96N95 335 aaPredicted RBP22.41■■□□□ 1.18
CSPG5-204ENST00000465441 PKMYT1Q99640 499 aa22.41■■□□□ 1.18
CSPG5-204ENST00000465441 TRIM9Q9C026 710 aa22.41■■□□□ 1.18
CSPG5-204ENST00000465441 INTS13Q9NVM9 706 aa22.41■■□□□ 1.18
CSPG5-204ENST00000465441 THG1LQ9NWX6 298 aaKnown RBP22.41■■□□□ 1.18
CSPG5-204ENST00000465441 ZMYM5Q9UJ78 669 aa22.41■■□□□ 1.18
CSPG5-204ENST00000465441 SMG5Q9UPR3 1016 aaKnown RBP22.41■■□□□ 1.18
CSPG5-204ENST00000465441 NUP210Q8TEM1 1887 aaPredicted RBP22.41■■□□□ 1.18
CSPG5-204ENST00000465441 OTOGLQ3ZCN5 2332 aa22.4■■□□□ 1.18
CSPG5-204ENST00000465441 ZNF233A6NK53 670 aa22.4■■□□□ 1.18
CSPG5-204ENST00000465441 GABRDO14764 452 aa22.4■■□□□ 1.18
CSPG5-204ENST00000465441 HCRTO43612 131 aa22.4■■□□□ 1.18
CSPG5-204ENST00000465441 LHX1P48742 406 aa22.4■■□□□ 1.18
CSPG5-204ENST00000465441 PON2Q15165 354 aa22.4■■□□□ 1.18
CSPG5-204ENST00000465441 SOWAHAQ2M3V2 549 aa22.4■■□□□ 1.18
CSPG5-204ENST00000465441 DGKKQ5KSL6 1271 aa22.4■■□□□ 1.18
CSPG5-204ENST00000465441 TXNDC8Q6A555 127 aa22.4■■□□□ 1.18
CSPG5-204ENST00000465441 STXBP4Q6ZWJ1 553 aa22.4■■□□□ 1.18
CSPG5-204ENST00000465441 CBWD2Q8IUF1 395 aa22.4■■□□□ 1.18
CSPG5-204ENST00000465441 TOP6BLQ8N6T0 577 aa22.4■■□□□ 1.18
CSPG5-204ENST00000465441 OR5B17Q8NGF7 314 aa22.4■■□□□ 1.18
CSPG5-204ENST00000465441 ZNF507Q8TCN5 953 aa22.4■■□□□ 1.18
CSPG5-204ENST00000465441 DHX58Q96C10 678 aa22.4■■□□□ 1.18
CSPG5-204ENST00000465441 DDX6P26196 483 aaKnown RBP eCLIP22.39■■□□□ 1.17
CSPG5-204ENST00000465441 AVPR1AP37288 418 aa22.39■■□□□ 1.17
CSPG5-204ENST00000465441 RPL10AP62906 217 aaKnown RBP22.39■■□□□ 1.17
CSPG5-204ENST00000465441 AMPD3Q01432 767 aa22.39■■□□□ 1.17
CSPG5-204ENST00000465441 SURF1Q15526 300 aa22.39■■□□□ 1.17
CSPG5-204ENST00000465441 CCDC142Q17RM4 750 aa22.39■■□□□ 1.17
CSPG5-204ENST00000465441 FOXD4L5Q5VV16 416 aaPredicted RBP22.39■■□□□ 1.17
CSPG5-204ENST00000465441 SHC4Q6S5L8 630 aa22.39■■□□□ 1.17
CSPG5-204ENST00000465441 ADGRF2Q8IZF7 708 aa22.39■■□□□ 1.17
CSPG5-204ENST00000465441 SPATA18Q8TC71 538 aa22.39■■□□□ 1.17
CSPG5-204ENST00000465441 FOXD4L4Q8WXT5 416 aaPredicted RBP22.39■■□□□ 1.17
CSPG5-204ENST00000465441 USP13Q92995 863 aaPredicted RBP22.39■■□□□ 1.17
CSPG5-204ENST00000465441 FAM83CQ9BQN1 747 aa22.39■■□□□ 1.17
CSPG5-204ENST00000465441 CUEDC2Q9H467 287 aa22.39■■□□□ 1.17
CSPG5-204ENST00000465441 ABCB6Q9NP58 842 aa22.39■■□□□ 1.17
CSPG5-204ENST00000465441 HSPBP1Q9NZL4 362 aa22.39■■□□□ 1.17
CSPG5-204ENST00000465441 CCL26Q9Y258 94 aa22.39■■□□□ 1.17
CSPG5-204ENST00000465441 R3HCC1Q9Y3T6 440 aaKnown RBP22.39■■□□□ 1.17
CSPG5-204ENST00000465441 DCHS1Q96JQ0 3298 aa22.39■■□□□ 1.17
CSPG5-204ENST00000465441 PTPRJQ12913 1337 aa22.38■■□□□ 1.17
CSPG5-204ENST00000465441 CUTAO60888 179 aa22.38■■□□□ 1.17
CSPG5-204ENST00000465441 DMWDQ09019 674 aa22.38■■□□□ 1.17
CSPG5-204ENST00000465441 PUM1Q14671 1186 aaKnown RBP eCLIP22.38■■□□□ 1.17
CSPG5-204ENST00000465441 DUOXA2Q1HG44 320 aa22.38■■□□□ 1.17
CSPG5-204ENST00000465441 ITPRIPL2Q3MIP1 535 aa22.38■■□□□ 1.17
CSPG5-204ENST00000465441 Q6ZS52 159 aa22.38■■□□□ 1.17
CSPG5-204ENST00000465441 DPH6Q7L8W6 267 aa22.38■■□□□ 1.17
CSPG5-204ENST00000465441 MON1AQ86VX9 555 aa22.38■■□□□ 1.17
CSPG5-204ENST00000465441 IQUBQ8NA54 791 aa22.38■■□□□ 1.17
CSPG5-204ENST00000465441 RDH13Q8NBN7 331 aa22.38■■□□□ 1.17
CSPG5-204ENST00000465441 MRPS31Q92665 395 aaKnown RBP22.38■■□□□ 1.17
CSPG5-204ENST00000465441 SECISBP2LQ93073 1101 aaKnown RBP22.38■■□□□ 1.17
CSPG5-204ENST00000465441 C7orf25Q9BPX7 421 aa22.38■■□□□ 1.17
CSPG5-204ENST00000465441 TDP1Q9NUW8 608 aa22.38■■□□□ 1.17
CSPG5-204ENST00000465441 GPR179Q6PRD1 2367 aa22.37■■□□□ 1.17
CSPG5-204ENST00000465441 SOBPA7XYQ1 873 aa22.37■■□□□ 1.17
CSPG5-204ENST00000465441 TGFB1I1O43294 461 aa22.37■■□□□ 1.17
CSPG5-204ENST00000465441 ATP2C2O75185 946 aa22.37■■□□□ 1.17
CSPG5-204ENST00000465441 NOL4O94818 638 aa22.37■■□□□ 1.17
CSPG5-204ENST00000465441 YEATS4O95619 227 aa22.37■■□□□ 1.17
CSPG5-204ENST00000465441 TNNC2P02585 160 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms