RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 LDHAP00338 332 aaKnown RBP15.29■□□□□ 0.04
ATG4B-214ENST00000465399 ITGB3P05106 788 aa15.29■□□□□ 0.04
ATG4B-214ENST00000465399 CSH1P0DML2 217 aa15.29■□□□□ 0.04
ATG4B-214ENST00000465399 CSH2P0DML3 217 aa15.29■□□□□ 0.04
ATG4B-214ENST00000465399 ADSSP30520 456 aa15.29■□□□□ 0.04
ATG4B-214ENST00000465399 POLR2BP30876 1174 aaKnown RBP15.29■□□□□ 0.04
ATG4B-214ENST00000465399 AMPD2Q01433 879 aa15.29■□□□□ 0.04
ATG4B-214ENST00000465399 GRSF1Q12849 480 aaKnown RBP eCLIP15.29■□□□□ 0.04
ATG4B-214ENST00000465399 RUNX3Q13761 415 aa15.29■□□□□ 0.04
ATG4B-214ENST00000465399 L1TD1Q5T7N2 865 aaKnown RBP15.29■□□□□ 0.04
ATG4B-214ENST00000465399 RRAGBQ5VZM2 374 aa15.29■□□□□ 0.04
ATG4B-214ENST00000465399 CC2D1AQ6P1N0 951 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-214ENST00000465399 SV2BQ7L1I2 683 aa15.29■□□□□ 0.04
ATG4B-214ENST00000465399 WDR5BQ86VZ2 330 aa15.29■□□□□ 0.04
ATG4B-214ENST00000465399 CACTINQ8WUQ7 758 aaKnown RBP15.29■□□□□ 0.04
ATG4B-214ENST00000465399 MRPS31Q92665 395 aaKnown RBP15.29■□□□□ 0.04
ATG4B-214ENST00000465399 SAAL1Q96ER3 474 aa15.29■□□□□ 0.04
ATG4B-214ENST00000465399 ACCSQ96QU6 501 aa15.29■□□□□ 0.04
ATG4B-214ENST00000465399 PI4K2AQ9BTU6 479 aa15.29■□□□□ 0.04
ATG4B-214ENST00000465399 TDP1Q9NUW8 608 aa15.29■□□□□ 0.04
ATG4B-214ENST00000465399 UXTQ9UBK9 157 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-214ENST00000465399 MAGED2Q9UNF1 606 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-214ENST00000465399 AGAP1Q9UPQ3 857 aa15.29■□□□□ 0.04
ATG4B-214ENST00000465399 SOBPA7XYQ1 873 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 SLC30A4O14863 429 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 HUS1O60921 280 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 F11P03951 625 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 HMGA1P17096 107 aaKnown RBP15.28■□□□□ 0.04
ATG4B-214ENST00000465399 PDCP20941 246 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 RPL10AP62906 217 aaKnown RBP15.28■□□□□ 0.04
ATG4B-214ENST00000465399 MYL7Q01449 175 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 USP49Q70CQ1 688 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 TMEM150AQ86TG1 271 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 BRSK2Q8IWQ3 736 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 SYCP3Q8IZU3 236 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 TMEM86AQ8N2M4 240 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 PDCL2Q8N4E4 241 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 FAM160A2Q8N612 972 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-214ENST00000465399 LEO1Q8WVC0 666 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-214ENST00000465399 USP13Q92995 863 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-214ENST00000465399 EXOC4Q96A65 974 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 FAM83CQ9BQN1 747 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 ACBD6Q9BR61 282 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 STRA6Q9BX79 667 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 EBF3Q9H4W6 596 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 ABCB6Q9NP58 842 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 TMLHEQ9NVH6 421 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 C2orf42Q9NWW7 574 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 DDX43Q9NXZ2 648 aaKnown RBP15.28■□□□□ 0.04
ATG4B-214ENST00000465399 RBAKQ9NYW8 714 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-214ENST00000465399 TBC1D7Q9P0N9 293 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 CCL26Q9Y258 94 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 PCDHB13Q9Y5F0 798 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 CLIC4Q9Y696 253 aa15.28■□□□□ 0.04
ATG4B-214ENST00000465399 PTPRDP23468 1912 aa15.27■□□□□ 0.04
ATG4B-214ENST00000465399 MYMKA6NI61 221 aa15.27■□□□□ 0.04
ATG4B-214ENST00000465399 GARTP22102 1010 aa15.27■□□□□ 0.04
ATG4B-214ENST00000465399 KCNA1Q09470 495 aa15.27■□□□□ 0.04
ATG4B-214ENST00000465399 ALCAMQ13740 583 aa15.27■□□□□ 0.04
ATG4B-214ENST00000465399 TMEM196Q5HYL7 178 aa15.27■□□□□ 0.04
ATG4B-214ENST00000465399 TXNDC8Q6A555 127 aa15.27■□□□□ 0.04
ATG4B-214ENST00000465399 TRIM68Q6AZZ1 485 aa15.27■□□□□ 0.04
ATG4B-214ENST00000465399 LRRC52Q8N7C0 313 aa15.27■□□□□ 0.04
ATG4B-214ENST00000465399 C1orf127Q8N9H9 656 aa15.27■□□□□ 0.04
ATG4B-214ENST00000465399 CNTNAP3BQ96NU0 1288 aa15.27■□□□□ 0.04
ATG4B-214ENST00000465399 CNTNAP3Q9BZ76 1288 aa15.27■□□□□ 0.04
ATG4B-214ENST00000465399 HPS4Q9NQG7 708 aa15.27■□□□□ 0.04
ATG4B-214ENST00000465399 OLFML3Q9NRN5 406 aa15.27■□□□□ 0.04
ATG4B-214ENST00000465399 FBXO2Q9UK22 296 aaPredicted RBP15.27■□□□□ 0.04
ATG4B-214ENST00000465399 ITGA11Q9UKX5 1188 aa15.27■□□□□ 0.04
ATG4B-214ENST00000465399 L1RE1Q9UN81 338 aa15.27■□□□□ 0.04
ATG4B-214ENST00000465399 SLC8A2Q9UPR5 921 aa15.27■□□□□ 0.04
ATG4B-214ENST00000465399 SRPRBQ9Y5M8 271 aaKnown RBP15.27■□□□□ 0.04
ATG4B-214ENST00000465399 CCDC163A0A0D9SF12 145 aa15.26■□□□□ 0.03
ATG4B-214ENST00000465399 TRDMT1O14717 391 aaKnown RBP15.26■□□□□ 0.03
ATG4B-214ENST00000465399 EXTL3O43909 919 aa15.26■□□□□ 0.03
ATG4B-214ENST00000465399 KRT19P08727 400 aa15.26■□□□□ 0.03
ATG4B-214ENST00000465399 IDEP14735 1019 aa15.26■□□□□ 0.03
ATG4B-214ENST00000465399 ACAT1P24752 427 aaKnown RBP15.26■□□□□ 0.03
ATG4B-214ENST00000465399 CYP2F1P24903 491 aa15.26■□□□□ 0.03
ATG4B-214ENST00000465399 GPR15P49685 360 aa15.26■□□□□ 0.03
ATG4B-214ENST00000465399 WNT7BP56706 349 aa15.26■□□□□ 0.03
ATG4B-214ENST00000465399 ZNF268Q14587 947 aaPredicted RBP15.26■□□□□ 0.03
ATG4B-214ENST00000465399 PDGFRLQ15198 375 aa15.26■□□□□ 0.03
ATG4B-214ENST00000465399 PPM1JQ5JR12 505 aa15.26■□□□□ 0.03
ATG4B-214ENST00000465399 INTS6LQ5JSJ4 861 aaKnown RBP15.26■□□□□ 0.03
ATG4B-214ENST00000465399 SDHAF4Q5VUM1 108 aa15.26■□□□□ 0.03
ATG4B-214ENST00000465399 FSTL4Q6MZW2 842 aa15.26■□□□□ 0.03
ATG4B-214ENST00000465399 CCDC73Q6ZRK6 1079 aa15.26■□□□□ 0.03
ATG4B-214ENST00000465399 MON1AQ86VX9 555 aa15.26■□□□□ 0.03
ATG4B-214ENST00000465399 CSGALNACT2Q8N6G5 542 aa15.26■□□□□ 0.03
ATG4B-214ENST00000465399 STKLD1Q8NE28 680 aa15.26■□□□□ 0.03
ATG4B-214ENST00000465399 SPATA18Q8TC71 538 aa15.26■□□□□ 0.03
ATG4B-214ENST00000465399 NOC3LQ8WTT2 800 aaKnown RBP15.26■□□□□ 0.03
ATG4B-214ENST00000465399 GAB3Q8WWW8 586 aa15.26■□□□□ 0.03
ATG4B-214ENST00000465399 DNAJC19Q96DA6 116 aa15.26■□□□□ 0.03
ATG4B-214ENST00000465399 TRMT2BQ96GJ1 504 aaKnown RBP15.26■□□□□ 0.03
ATG4B-214ENST00000465399 R3HCC1Q9Y3T6 440 aaKnown RBP15.26■□□□□ 0.03
ATG4B-214ENST00000465399 SDK1Q7Z5N4 2213 aa15.26■□□□□ 0.03
ATG4B-214ENST00000465399 TPRP12270 2363 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms